RNA–Protein interactions for RNA: ENST00000471861.5

CCDC78-208, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 743 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-208ENST00000471861 NISCHQ9Y2I1 1504 aa50.68■■■■■ 5.7
CCDC78-208ENST00000471861 ABCC9O60706 1549 aa46.18■■■■■ 4.98
CCDC78-208ENST00000471861 CCDC180Q9P1Z9 1646 aa45.69■■■■■ 4.9
CCDC78-208ENST00000471861 DNAJC5BQ9UF47 199 aa43.81■■■■■ 4.6
CCDC78-208ENST00000471861 RB1CC1Q8TDY2 1594 aa43.7■■■■■ 4.59
CCDC78-208ENST00000471861 NACADO15069 1562 aa43.29■■■■■ 4.52
CCDC78-208ENST00000471861 PABPN1Q86U42 306 aaKnown RBP eCLIP42.88■■■■■ 4.45
CCDC78-208ENST00000471861 DCAF8L2P0C7V8 631 aa42.82■■■■■ 4.45
CCDC78-208ENST00000471861 UNC13AQ9UPW8 1703 aa42.79■■■■■ 4.44
CCDC78-208ENST00000471861 BICRAQ9NZM4 1560 aa42.56■■■■■ 4.4
CCDC78-208ENST00000471861 MYO15BQ96JP2 1530 aa42.56■■■■■ 4.4
CCDC78-208ENST00000471861 ZCCHC6Q5VYS8 1495 aaKnown RBP41.94■■■■■ 4.3
CCDC78-208ENST00000471861 SHROOM4Q9ULL8 1493 aa41.85■■■■■ 4.29
CCDC78-208ENST00000471861 DCAF1Q9Y4B6 1507 aa41.83■■■■■ 4.29
CCDC78-208ENST00000471861 CC2D2AQ9P2K1 1620 aa41.7■■■■■ 4.27
CCDC78-208ENST00000471861 CECR2Q9BXF3 1484 aa41.64■■■■■ 4.26
CCDC78-208ENST00000471861 SCRIBQ14160 1630 aa41.62■■■■■ 4.25
CCDC78-208ENST00000471861 EIF4G1Q04637 1599 aaKnown RBP41.5■■■■■ 4.23
CCDC78-208ENST00000471861 DNAJC5Q9H3Z4 198 aa40.51■■■■■ 4.08
CCDC78-208ENST00000471861 CUX2O14529 1486 aa39.99■■■■□ 3.99
CCDC78-208ENST00000471861 NCAPD3P42695 1498 aa39.99■■■■□ 3.99
CCDC78-208ENST00000471861 ERCC6Q03468 1493 aa39.85■■■■□ 3.97
CCDC78-208ENST00000471861 ATAD2BQ9ULI0 1458 aa39.81■■■■□ 3.96
CCDC78-208ENST00000471861 HMGXB3Q12766 1538 aa39.67■■■■□ 3.94
CCDC78-208ENST00000471861 SMARCA4P51532 1647 aa39.65■■■■□ 3.94
CCDC78-208ENST00000471861 SMARCA2P51531 1590 aa39.63■■■■□ 3.94
CCDC78-208ENST00000471861 NESP48681 1621 aa39.58■■■■□ 3.93
CCDC78-208ENST00000471861 BAZ1BQ9UIG0 1483 aaKnown RBP39.37■■■■□ 3.89
CCDC78-208ENST00000471861 BAZ1AQ9NRL2 1556 aaPredicted RBP39.34■■■■□ 3.89
CCDC78-208ENST00000471861 THOC2Q8NI27 1593 aaKnown RBP39.3■■■■□ 3.88
CCDC78-208ENST00000471861 PEG3Q9GZU2 1588 aa39.29■■■■□ 3.88
CCDC78-208ENST00000471861 LAMC3Q9Y6N6 1575 aa39.15■■■■□ 3.86
CCDC78-208ENST00000471861 MROH2BQ7Z745 1585 aa39.08■■■■□ 3.85
CCDC78-208ENST00000471861 KIF21AQ7Z4S6 1674 aa39.03■■■■□ 3.84
CCDC78-208ENST00000471861 PDS5BQ9NTI5 1447 aa38.89■■■■□ 3.82
CCDC78-208ENST00000471861 CADPSQ9ULU8 1353 aa38.72■■■■□ 3.79
CCDC78-208ENST00000471861 MRC2Q9UBG0 1479 aa38.66■■■■□ 3.78
CCDC78-208ENST00000471861 WDR62O43379 1518 aa38.62■■■■□ 3.77
CCDC78-208ENST00000471861 WIZO95785 1651 aa38.57■■■■□ 3.76
CCDC78-208ENST00000471861 TRIM41Q8WV44 630 aa38.49■■■■□ 3.75
CCDC78-208ENST00000471861 CEP164Q9UPV0 1460 aa38.38■■■■□ 3.73
CCDC78-208ENST00000471861 FANCD2Q9BXW9 1451 aa38.31■■■■□ 3.72
CCDC78-208ENST00000471861 CFTRP13569 1480 aa38.22■■■■□ 3.71
CCDC78-208ENST00000471861 URB2Q14146 1524 aaKnown RBP38.08■■■■□ 3.69
CCDC78-208ENST00000471861 RSF1Q96T23 1441 aaPredicted RBP38.06■■■■□ 3.68
CCDC78-208ENST00000471861 TOP2AP11388 1531 aaKnown RBP38.04■■■■□ 3.68
CCDC78-208ENST00000471861 OSCARQ8IYS5 282 aa37.98■■■■□ 3.67
CCDC78-208ENST00000471861 PRDM2Q13029 1718 aa37.77■■■■□ 3.64
CCDC78-208ENST00000471861 ZNF608Q9ULD9 1512 aaPredicted RBP37.69■■■■□ 3.62
CCDC78-208ENST00000471861 RIMBP3CA6NJZ7 1639 aa37.68■■■■□ 3.62
CCDC78-208ENST00000471861 RIMBP3BA6NNM3 1639 aa37.68■■■■□ 3.62
CCDC78-208ENST00000471861 RIMBP3Q9UFD9 1639 aa37.68■■■■□ 3.62
CCDC78-208ENST00000471861 IFT140Q96RY7 1462 aa37.63■■■■□ 3.61
CCDC78-208ENST00000471861 CCDC88BA6NC98 1476 aa37.6■■■■□ 3.61
CCDC78-208ENST00000471861 TOPBP1Q92547 1522 aa37.55■■■■□ 3.6
CCDC78-208ENST00000471861 ARHGEF11O15085 1522 aa37.51■■■■□ 3.59
CCDC78-208ENST00000471861 EIF4G3O43432 1585 aaKnown RBP37.45■■■■□ 3.59
CCDC78-208ENST00000471861 DNMBPQ6XZF7 1577 aa37.36■■■■□ 3.57
CCDC78-208ENST00000471861 ABCC8Q09428 1581 aa37.33■■■■□ 3.57
CCDC78-208ENST00000471861 TARBP1Q13395 1621 aaKnown RBP37.28■■■■□ 3.56
CCDC78-208ENST00000471861 CHD1O14646 1710 aa37.24■■■■□ 3.55
CCDC78-208ENST00000471861 AQRO60306 1485 aaKnown RBP eCLIP37.24■■■■□ 3.55
CCDC78-208ENST00000471861 CYB5RLQ6IPT4 315 aa37.16■■■■□ 3.54
CCDC78-208ENST00000471861 POLA1P09884 1462 aaPredicted RBP37.14■■■■□ 3.54
CCDC78-208ENST00000471861 ARAP1Q96P48 1450 aa37.13■■■■□ 3.54
CCDC78-208ENST00000471861 RAD54L2Q9Y4B4 1467 aa37.01■■■■□ 3.52
CCDC78-208ENST00000471861 FBLN2P98095 1184 aa36.98■■■■□ 3.51
CCDC78-208ENST00000471861 TDRD9Q8NDG6 1382 aaKnown RBP36.91■■■■□ 3.5
CCDC78-208ENST00000471861 SOGA1O94964 1423 aa36.89■■■■□ 3.5
CCDC78-208ENST00000471861 SNAPC4Q5SXM2 1469 aa36.87■■■■□ 3.49
CCDC78-208ENST00000471861 TRHP20396 242 aaPredicted RBP36.86■■■■□ 3.49
CCDC78-208ENST00000471861 CLASP1Q7Z460 1538 aa36.85■■■■□ 3.49
CCDC78-208ENST00000471861 FGD5Q6ZNL6 1462 aa36.82■■■■□ 3.49
CCDC78-208ENST00000471861 WDR97A6NE52 1622 aa36.8■■■■□ 3.48
CCDC78-208ENST00000471861 CUX1P39880 1505 aa36.75■■■■□ 3.47
CCDC78-208ENST00000471861 MAGI1Q96QZ7 1491 aaPredicted RBP36.71■■■■□ 3.47
CCDC78-208ENST00000471861 SYNJ1O43426 1573 aa36.69■■■■□ 3.46
CCDC78-208ENST00000471861 GRIN2BQ13224 1484 aa36.65■■■■□ 3.46
CCDC78-208ENST00000471861 CHMP7Q8WUX9 453 aaPredicted RBP36.63■■■■□ 3.45
CCDC78-208ENST00000471861 SYNJ2O15056 1496 aa36.61■■■■□ 3.45
CCDC78-208ENST00000471861 PBRM1Q86U86 1689 aa36.51■■■■□ 3.43
CCDC78-208ENST00000471861 GAPVD1Q14C86 1478 aa36.45■■■■□ 3.43
CCDC78-208ENST00000471861 ABCA5Q8WWZ7 1642 aa36.41■■■■□ 3.42
CCDC78-208ENST00000471861 ABCA10Q8WWZ4 1543 aa36.38■■■■□ 3.41
CCDC78-208ENST00000471861 ERCC6L2Q5T890 1561 aa36.27■■■■□ 3.4
CCDC78-208ENST00000471861 GRIN2AQ12879 1464 aa36.21■■■■□ 3.39
CCDC78-208ENST00000471861 ADAMTS12P58397 1594 aa36.16■■■■□ 3.38
CCDC78-208ENST00000471861 CEP170Q5SW79 1584 aa36.15■■■■□ 3.38
CCDC78-208ENST00000471861 NUP160Q12769 1436 aa36.13■■■■□ 3.37
CCDC78-208ENST00000471861 AEBP2Q6ZN18 517 aaPredicted RBP36.1■■■■□ 3.37
CCDC78-208ENST00000471861 WRNQ14191 1432 aaPredicted RBP eCLIP36.07■■■■□ 3.36
CCDC78-208ENST00000471861 SHROOM2Q13796 1616 aa36.04■■■■□ 3.36
CCDC78-208ENST00000471861 BIVM-ERCC5R4GMW8 1640 aa36.01■■■■□ 3.35
CCDC78-208ENST00000471861 TOP2BQ02880 1626 aa35.98■■■■□ 3.35
CCDC78-208ENST00000471861 FHAD1B1AJZ9 1412 aa35.97■■■■□ 3.35
CCDC78-208ENST00000471861 ERICH3Q5RHP9 1530 aa35.88■■■■□ 3.33
CCDC78-208ENST00000471861 SUPT5HO00267 1087 aaKnown RBP35.88■■■■□ 3.33
CCDC78-208ENST00000471861 KIF13AQ9H1H9 1805 aa35.81■■■■□ 3.32
CCDC78-208ENST00000471861 PRG4Q92954 1404 aaPredicted RBP35.76■■■■□ 3.32
CCDC78-208ENST00000471861 RUSC2Q8N2Y8 1516 aa35.67■■■■□ 3.3
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms