RNA–Protein interactions for RNA: ENST00000471812.5

GGPS1-204, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 2

Gene GGPS1, Length 850 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-204ENST00000471812 AEBP2Q6ZN18 517 aaPredicted RBP24.41■■□□□ 1.5
GGPS1-204ENST00000471812 NISCHQ9Y2I1 1504 aa23.4■■□□□ 1.34
GGPS1-204ENST00000471812 CHIC1Q5VXU3 224 aa23.06■■□□□ 1.28
GGPS1-204ENST00000471812 CCDC180Q9P1Z9 1646 aa20.83■□□□□ 0.93
GGPS1-204ENST00000471812 SENP3Q9H4L4 574 aaPredicted RBP20.83■□□□□ 0.93
GGPS1-204ENST00000471812 ABCC9O60706 1549 aa20.63■□□□□ 0.89
GGPS1-204ENST00000471812 PHF23Q9BUL5 403 aaPredicted RBP20.56■□□□□ 0.88
GGPS1-204ENST00000471812 RB1CC1Q8TDY2 1594 aa19.64■□□□□ 0.73
GGPS1-204ENST00000471812 DCAF8L2P0C7V8 631 aa19.6■□□□□ 0.73
GGPS1-204ENST00000471812 NACADO15069 1562 aa19.57■□□□□ 0.72
GGPS1-204ENST00000471812 ZCCHC6Q5VYS8 1495 aaKnown RBP19.48■□□□□ 0.71
GGPS1-204ENST00000471812 FOXD1Q16676 465 aa19.44■□□□□ 0.7
GGPS1-204ENST00000471812 UNC13AQ9UPW8 1703 aa19.42■□□□□ 0.7
GGPS1-204ENST00000471812 MYO15BQ96JP2 1530 aa19.35■□□□□ 0.69
GGPS1-204ENST00000471812 PABPN1Q86U42 306 aaKnown RBP eCLIP19.26■□□□□ 0.67
GGPS1-204ENST00000471812 DCAF1Q9Y4B6 1507 aa19.25■□□□□ 0.67
GGPS1-204ENST00000471812 BICRAQ9NZM4 1560 aa19.23■□□□□ 0.67
GGPS1-204ENST00000471812 DNAJC5BQ9UF47 199 aa19.15■□□□□ 0.66
GGPS1-204ENST00000471812 SCRIBQ14160 1630 aa19.12■□□□□ 0.65
GGPS1-204ENST00000471812 SHROOM4Q9ULL8 1493 aa18.72■□□□□ 0.59
GGPS1-204ENST00000471812 PLPPR3Q6T4P5 718 aa18.71■□□□□ 0.59
GGPS1-204ENST00000471812 EIF4G1Q04637 1599 aaKnown RBP18.64■□□□□ 0.58
GGPS1-204ENST00000471812 CC2D2AQ9P2K1 1620 aa18.63■□□□□ 0.57
GGPS1-204ENST00000471812 CECR2Q9BXF3 1484 aa18.48■□□□□ 0.55
GGPS1-204ENST00000471812 SMARCA4P51532 1647 aa18.23■□□□□ 0.51
GGPS1-204ENST00000471812 MSH5O43196 834 aa18.22■□□□□ 0.51
GGPS1-204ENST00000471812 PIAS4Q8N2W9 510 aaPredicted RBP18.16■□□□□ 0.5
GGPS1-204ENST00000471812 ATAD2BQ9ULI0 1458 aa18.13■□□□□ 0.49
GGPS1-204ENST00000471812 MROH2BQ7Z745 1585 aa18.12■□□□□ 0.49
GGPS1-204ENST00000471812 PPP6R1Q9UPN7 881 aa18.1■□□□□ 0.49
GGPS1-204ENST00000471812 BAZ1AQ9NRL2 1556 aaPredicted RBP18.08■□□□□ 0.49
GGPS1-204ENST00000471812 NCAPD3P42695 1498 aa18.08■□□□□ 0.49
GGPS1-204ENST00000471812 ADRA2BP18089 450 aa18.05■□□□□ 0.48
GGPS1-204ENST00000471812 SMARCA2P51531 1590 aa18.02■□□□□ 0.48
GGPS1-204ENST00000471812 HMGXB3Q12766 1538 aa17.99■□□□□ 0.47
GGPS1-204ENST00000471812 POTEDQ86YR6 584 aa17.99■□□□□ 0.47
GGPS1-204ENST00000471812 PEG3Q9GZU2 1588 aa17.98■□□□□ 0.47
GGPS1-204ENST00000471812 WIZO95785 1651 aa17.94■□□□□ 0.46
GGPS1-204ENST00000471812 BAZ1BQ9UIG0 1483 aaKnown RBP17.94■□□□□ 0.46
GGPS1-204ENST00000471812 NESP48681 1621 aa17.87■□□□□ 0.45
GGPS1-204ENST00000471812 RSF1Q96T23 1441 aaPredicted RBP17.8■□□□□ 0.44
GGPS1-204ENST00000471812 ERCC6Q03468 1493 aa17.67■□□□□ 0.42
GGPS1-204ENST00000471812 KIF21AQ7Z4S6 1674 aa17.64■□□□□ 0.42
GGPS1-204ENST00000471812 TOP2AP11388 1531 aaKnown RBP17.63■□□□□ 0.41
GGPS1-204ENST00000471812 LAMC3Q9Y6N6 1575 aa17.62■□□□□ 0.41
GGPS1-204ENST00000471812 THOC2Q8NI27 1593 aaKnown RBP17.58■□□□□ 0.41
GGPS1-204ENST00000471812 CADPSQ9ULU8 1353 aa17.54■□□□□ 0.4
GGPS1-204ENST00000471812 CUX2O14529 1486 aa17.5■□□□□ 0.39
GGPS1-204ENST00000471812 CCDC88BA6NC98 1476 aa17.46■□□□□ 0.39
GGPS1-204ENST00000471812 PDS5BQ9NTI5 1447 aa17.45■□□□□ 0.38
GGPS1-204ENST00000471812 CFTRP13569 1480 aa17.44■□□□□ 0.38
GGPS1-204ENST00000471812 FANCD2Q9BXW9 1451 aa17.38■□□□□ 0.37
GGPS1-204ENST00000471812 MRC2Q9UBG0 1479 aa17.37■□□□□ 0.37
GGPS1-204ENST00000471812 PRDM2Q13029 1718 aa17.35■□□□□ 0.37
GGPS1-204ENST00000471812 CEP164Q9UPV0 1460 aa17.35■□□□□ 0.37
GGPS1-204ENST00000471812 WDR62O43379 1518 aa17.34■□□□□ 0.37
GGPS1-204ENST00000471812 URB2Q14146 1524 aaKnown RBP17.3■□□□□ 0.36
GGPS1-204ENST00000471812 SUPT5HO00267 1087 aaKnown RBP17.25■□□□□ 0.35
GGPS1-204ENST00000471812 DNAJC5Q9H3Z4 198 aa17.18■□□□□ 0.34
GGPS1-204ENST00000471812 TOPBP1Q92547 1522 aa17.12■□□□□ 0.33
GGPS1-204ENST00000471812 DNMBPQ6XZF7 1577 aa17.06■□□□□ 0.32
GGPS1-204ENST00000471812 ZNF608Q9ULD9 1512 aaPredicted RBP17.06■□□□□ 0.32
GGPS1-204ENST00000471812 CUX1P39880 1505 aa17■□□□□ 0.31
GGPS1-204ENST00000471812 TARBP1Q13395 1621 aaKnown RBP16.99■□□□□ 0.31
GGPS1-204ENST00000471812 POLA1P09884 1462 aaPredicted RBP16.97■□□□□ 0.31
GGPS1-204ENST00000471812 IFT140Q96RY7 1462 aa16.96■□□□□ 0.31
GGPS1-204ENST00000471812 RAD54L2Q9Y4B4 1467 aa16.96■□□□□ 0.31
GGPS1-204ENST00000471812 EIF4G3O43432 1585 aaKnown RBP16.94■□□□□ 0.3
GGPS1-204ENST00000471812 ABCC8Q09428 1581 aa16.93■□□□□ 0.3
GGPS1-204ENST00000471812 FGD5Q6ZNL6 1462 aa16.92■□□□□ 0.3
GGPS1-204ENST00000471812 AQRO60306 1485 aaKnown RBP eCLIP16.9■□□□□ 0.3
GGPS1-204ENST00000471812 SOGA1O94964 1423 aa16.85■□□□□ 0.29
GGPS1-204ENST00000471812 KCNA4P22459 653 aa16.84■□□□□ 0.29
GGPS1-204ENST00000471812 WDR97A6NE52 1622 aa16.84■□□□□ 0.29
GGPS1-204ENST00000471812 TDRD9Q8NDG6 1382 aaKnown RBP16.83■□□□□ 0.28
GGPS1-204ENST00000471812 SYNJ1O43426 1573 aa16.82■□□□□ 0.28
GGPS1-204ENST00000471812 CHD1O14646 1710 aa16.81■□□□□ 0.28
GGPS1-204ENST00000471812 BIVM-ERCC5R4GMW8 1640 aa16.77■□□□□ 0.27
GGPS1-204ENST00000471812 TOP2BQ02880 1626 aa16.74■□□□□ 0.27
GGPS1-204ENST00000471812 WRNQ14191 1432 aaPredicted RBP eCLIP16.73■□□□□ 0.27
GGPS1-204ENST00000471812 OSCARQ8IYS5 282 aa16.73■□□□□ 0.27
GGPS1-204ENST00000471812 PBRM1Q86U86 1689 aa16.72■□□□□ 0.27
GGPS1-204ENST00000471812 SNAPC4Q5SXM2 1469 aa16.72■□□□□ 0.27
GGPS1-204ENST00000471812 ABCA5Q8WWZ7 1642 aa16.7■□□□□ 0.26
GGPS1-204ENST00000471812 ABCA10Q8WWZ4 1543 aa16.69■□□□□ 0.26
GGPS1-204ENST00000471812 GAPVD1Q14C86 1478 aa16.66■□□□□ 0.26
GGPS1-204ENST00000471812 FBLN2P98095 1184 aa16.65■□□□□ 0.26
GGPS1-204ENST00000471812 RIMBP3CA6NJZ7 1639 aa16.64■□□□□ 0.25
GGPS1-204ENST00000471812 RIMBP3BA6NNM3 1639 aa16.64■□□□□ 0.25
GGPS1-204ENST00000471812 RIMBP3Q9UFD9 1639 aa16.64■□□□□ 0.25
GGPS1-204ENST00000471812 GRIN2BQ13224 1484 aa16.64■□□□□ 0.25
GGPS1-204ENST00000471812 MAPK8IP2Q13387 824 aaPredicted RBP16.62■□□□□ 0.25
GGPS1-204ENST00000471812 TRIM41Q8WV44 630 aa16.62■□□□□ 0.25
GGPS1-204ENST00000471812 PPP4R3CPQ6ZMV5 832 aa16.6■□□□□ 0.25
GGPS1-204ENST00000471812 MAGI1Q96QZ7 1491 aaPredicted RBP16.6■□□□□ 0.25
GGPS1-204ENST00000471812 ARHGEF11O15085 1522 aa16.59■□□□□ 0.25
GGPS1-204ENST00000471812 CLASP1Q7Z460 1538 aa16.56■□□□□ 0.24
GGPS1-204ENST00000471812 SYNJ2O15056 1496 aa16.56■□□□□ 0.24
GGPS1-204ENST00000471812 ADAMTS12P58397 1594 aa16.55■□□□□ 0.24
GGPS1-204ENST00000471812 CHMP7Q8WUX9 453 aaPredicted RBP16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 233.7 ms