RNA–Protein interactions for RNA: ENST00000471728.1

PSEN2-205, Transcript of presenilin 2, humanhuman

TSL 3

Gene PSEN2, Length 570 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN2-205ENST00000471728 NISCHQ9Y2I1 1504 aa36.03■■■■□ 3.36
PSEN2-205ENST00000471728 ABCC9O60706 1549 aa32.87■■■□□ 2.85
PSEN2-205ENST00000471728 CCDC180Q9P1Z9 1646 aa32.51■■■□□ 2.8
PSEN2-205ENST00000471728 DNAJC5BQ9UF47 199 aa31.17■■■□□ 2.58
PSEN2-205ENST00000471728 RB1CC1Q8TDY2 1594 aa31.16■■■□□ 2.58
PSEN2-205ENST00000471728 NACADO15069 1562 aa30.86■■■□□ 2.53
PSEN2-205ENST00000471728 DCAF8L2P0C7V8 631 aa30.54■■■□□ 2.48
PSEN2-205ENST00000471728 PABPN1Q86U42 306 aaKnown RBP eCLIP30.53■■■□□ 2.48
PSEN2-205ENST00000471728 MYO15BQ96JP2 1530 aa30.35■■■□□ 2.45
PSEN2-205ENST00000471728 UNC13AQ9UPW8 1703 aa30.3■■■□□ 2.44
PSEN2-205ENST00000471728 BICRAQ9NZM4 1560 aa30.22■■■□□ 2.43
PSEN2-205ENST00000471728 SHROOM4Q9ULL8 1493 aa29.91■■■□□ 2.38
PSEN2-205ENST00000471728 ZCCHC6Q5VYS8 1495 aaKnown RBP29.8■■■□□ 2.36
PSEN2-205ENST00000471728 DCAF1Q9Y4B6 1507 aa29.79■■■□□ 2.36
PSEN2-205ENST00000471728 CECR2Q9BXF3 1484 aa29.69■■■□□ 2.34
PSEN2-205ENST00000471728 CC2D2AQ9P2K1 1620 aa29.67■■■□□ 2.34
PSEN2-205ENST00000471728 SCRIBQ14160 1630 aa29.56■■■□□ 2.32
PSEN2-205ENST00000471728 EIF4G1Q04637 1599 aaKnown RBP29.54■■■□□ 2.32
PSEN2-205ENST00000471728 DNAJC5Q9H3Z4 198 aa28.99■■■□□ 2.23
PSEN2-205ENST00000471728 CUX2O14529 1486 aa28.58■■■□□ 2.17
PSEN2-205ENST00000471728 NCAPD3P42695 1498 aa28.51■■■□□ 2.15
PSEN2-205ENST00000471728 ERCC6Q03468 1493 aa28.46■■■□□ 2.15
PSEN2-205ENST00000471728 ATAD2BQ9ULI0 1458 aa28.34■■■□□ 2.13
PSEN2-205ENST00000471728 SMARCA2P51531 1590 aa28.25■■■□□ 2.11
PSEN2-205ENST00000471728 HMGXB3Q12766 1538 aa28.25■■■□□ 2.11
PSEN2-205ENST00000471728 SMARCA4P51532 1647 aa28.18■■■□□ 2.1
PSEN2-205ENST00000471728 NESP48681 1621 aa28.1■■■□□ 2.09
PSEN2-205ENST00000471728 BAZ1BQ9UIG0 1483 aaKnown RBP28.05■■■□□ 2.08
PSEN2-205ENST00000471728 BAZ1AQ9NRL2 1556 aaPredicted RBP28.03■■■□□ 2.08
PSEN2-205ENST00000471728 PEG3Q9GZU2 1588 aa27.95■■■□□ 2.07
PSEN2-205ENST00000471728 THOC2Q8NI27 1593 aaKnown RBP27.93■■■□□ 2.06
PSEN2-205ENST00000471728 LAMC3Q9Y6N6 1575 aa27.9■■■□□ 2.06
PSEN2-205ENST00000471728 PDS5BQ9NTI5 1447 aa27.79■■■□□ 2.04
PSEN2-205ENST00000471728 MROH2BQ7Z745 1585 aa27.73■■■□□ 2.03
PSEN2-205ENST00000471728 KIF21AQ7Z4S6 1674 aa27.69■■■□□ 2.02
PSEN2-205ENST00000471728 CADPSQ9ULU8 1353 aa27.61■■■□□ 2.01
PSEN2-205ENST00000471728 MRC2Q9UBG0 1479 aa27.56■■■□□ 2
PSEN2-205ENST00000471728 TRIM41Q8WV44 630 aa27.5■■□□□ 1.99
PSEN2-205ENST00000471728 WDR62O43379 1518 aa27.5■■□□□ 1.99
PSEN2-205ENST00000471728 CEP164Q9UPV0 1460 aa27.36■■□□□ 1.97
PSEN2-205ENST00000471728 WIZO95785 1651 aa27.33■■□□□ 1.97
PSEN2-205ENST00000471728 FANCD2Q9BXW9 1451 aa27.28■■□□□ 1.96
PSEN2-205ENST00000471728 CFTRP13569 1480 aa27.21■■□□□ 1.95
PSEN2-205ENST00000471728 OSCARQ8IYS5 282 aa27.18■■□□□ 1.94
PSEN2-205ENST00000471728 URB2Q14146 1524 aaKnown RBP27.06■■□□□ 1.92
PSEN2-205ENST00000471728 TOP2AP11388 1531 aaKnown RBP27.05■■□□□ 1.92
PSEN2-205ENST00000471728 RSF1Q96T23 1441 aaPredicted RBP27.04■■□□□ 1.92
PSEN2-205ENST00000471728 IFT140Q96RY7 1462 aa26.85■■□□□ 1.89
PSEN2-205ENST00000471728 RIMBP3CA6NJZ7 1639 aa26.81■■□□□ 1.88
PSEN2-205ENST00000471728 RIMBP3BA6NNM3 1639 aa26.81■■□□□ 1.88
PSEN2-205ENST00000471728 RIMBP3Q9UFD9 1639 aa26.81■■□□□ 1.88
PSEN2-205ENST00000471728 PRDM2Q13029 1718 aa26.8■■□□□ 1.88
PSEN2-205ENST00000471728 ZNF608Q9ULD9 1512 aaPredicted RBP26.79■■□□□ 1.88
PSEN2-205ENST00000471728 ARHGEF11O15085 1522 aa26.72■■□□□ 1.87
PSEN2-205ENST00000471728 CCDC88BA6NC98 1476 aa26.72■■□□□ 1.87
PSEN2-205ENST00000471728 TOPBP1Q92547 1522 aa26.71■■□□□ 1.87
PSEN2-205ENST00000471728 ABCC8Q09428 1581 aa26.68■■□□□ 1.86
PSEN2-205ENST00000471728 EIF4G3O43432 1585 aaKnown RBP26.63■■□□□ 1.85
PSEN2-205ENST00000471728 DNMBPQ6XZF7 1577 aa26.58■■□□□ 1.85
PSEN2-205ENST00000471728 CYB5RLQ6IPT4 315 aa26.53■■□□□ 1.84
PSEN2-205ENST00000471728 AQRO60306 1485 aaKnown RBP eCLIP26.49■■□□□ 1.83
PSEN2-205ENST00000471728 TARBP1Q13395 1621 aaKnown RBP26.49■■□□□ 1.83
PSEN2-205ENST00000471728 CHD1O14646 1710 aa26.44■■□□□ 1.82
PSEN2-205ENST00000471728 ARAP1Q96P48 1450 aa26.42■■□□□ 1.82
PSEN2-205ENST00000471728 POLA1P09884 1462 aaPredicted RBP26.42■■□□□ 1.82
PSEN2-205ENST00000471728 FBLN2P98095 1184 aa26.4■■□□□ 1.82
PSEN2-205ENST00000471728 TRHP20396 242 aaPredicted RBP26.37■■□□□ 1.81
PSEN2-205ENST00000471728 SOGA1O94964 1423 aa26.3■■□□□ 1.8
PSEN2-205ENST00000471728 RAD54L2Q9Y4B4 1467 aa26.3■■□□□ 1.8
PSEN2-205ENST00000471728 TDRD9Q8NDG6 1382 aaKnown RBP26.28■■□□□ 1.8
PSEN2-205ENST00000471728 WDR97A6NE52 1622 aa26.26■■□□□ 1.79
PSEN2-205ENST00000471728 SNAPC4Q5SXM2 1469 aa26.23■■□□□ 1.79
PSEN2-205ENST00000471728 CLASP1Q7Z460 1538 aa26.21■■□□□ 1.79
PSEN2-205ENST00000471728 FGD5Q6ZNL6 1462 aa26.19■■□□□ 1.78
PSEN2-205ENST00000471728 MAGI1Q96QZ7 1491 aaPredicted RBP26.18■■□□□ 1.78
PSEN2-205ENST00000471728 CHMP7Q8WUX9 453 aaPredicted RBP26.18■■□□□ 1.78
PSEN2-205ENST00000471728 SYNJ1O43426 1573 aa26.17■■□□□ 1.78
PSEN2-205ENST00000471728 GRIN2BQ13224 1484 aa26.13■■□□□ 1.77
PSEN2-205ENST00000471728 SYNJ2O15056 1496 aa26.1■■□□□ 1.77
PSEN2-205ENST00000471728 CUX1P39880 1505 aa26.09■■□□□ 1.77
PSEN2-205ENST00000471728 GAPVD1Q14C86 1478 aa25.97■■□□□ 1.75
PSEN2-205ENST00000471728 AEBP2Q6ZN18 517 aaPredicted RBP25.92■■□□□ 1.74
PSEN2-205ENST00000471728 PBRM1Q86U86 1689 aa25.91■■□□□ 1.74
PSEN2-205ENST00000471728 ABCA10Q8WWZ4 1543 aa25.89■■□□□ 1.74
PSEN2-205ENST00000471728 ABCA5Q8WWZ7 1642 aa25.86■■□□□ 1.73
PSEN2-205ENST00000471728 GRIN2AQ12879 1464 aa25.79■■□□□ 1.72
PSEN2-205ENST00000471728 WRNQ14191 1432 aaPredicted RBP eCLIP25.73■■□□□ 1.71
PSEN2-205ENST00000471728 NUP160Q12769 1436 aa25.72■■□□□ 1.71
PSEN2-205ENST00000471728 ERCC6L2Q5T890 1561 aa25.71■■□□□ 1.71
PSEN2-205ENST00000471728 ADAMTS12P58397 1594 aa25.7■■□□□ 1.71
PSEN2-205ENST00000471728 CEP170Q5SW79 1584 aa25.69■■□□□ 1.7
PSEN2-205ENST00000471728 FHAD1B1AJZ9 1412 aa25.64■■□□□ 1.7
PSEN2-205ENST00000471728 SHROOM2Q13796 1616 aa25.63■■□□□ 1.69
PSEN2-205ENST00000471728 TOP2BQ02880 1626 aa25.57■■□□□ 1.68
PSEN2-205ENST00000471728 ERICH3Q5RHP9 1530 aa25.57■■□□□ 1.68
PSEN2-205ENST00000471728 BIVM-ERCC5R4GMW8 1640 aa25.55■■□□□ 1.68
PSEN2-205ENST00000471728 PRG4Q92954 1404 aaPredicted RBP25.5■■□□□ 1.67
PSEN2-205ENST00000471728 SUPT5HO00267 1087 aaKnown RBP25.49■■□□□ 1.67
PSEN2-205ENST00000471728 JPH4Q96JJ6 628 aa25.43■■□□□ 1.66
PSEN2-205ENST00000471728 KIF13AQ9H1H9 1805 aa25.42■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms