RNA–Protein interactions for RNA: ENST00000471659.1

TCN2-206, Transcript of transcobalamin 2, humanhuman

TSL 3

Gene TCN2, Length 484 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCN2-206ENST00000471659 NISCHQ9Y2I1 1504 aa20.62■□□□□ 0.89
TCN2-206ENST00000471659 ABCC9O60706 1549 aa18.91■□□□□ 0.62
TCN2-206ENST00000471659 CCDC180Q9P1Z9 1646 aa18.69■□□□□ 0.58
TCN2-206ENST00000471659 DNAJC5BQ9UF47 199 aa18.03■□□□□ 0.48
TCN2-206ENST00000471659 RB1CC1Q8TDY2 1594 aa17.94■□□□□ 0.46
TCN2-206ENST00000471659 NACADO15069 1562 aa17.74■□□□□ 0.43
TCN2-206ENST00000471659 PABPN1Q86U42 306 aaKnown RBP eCLIP17.53■□□□□ 0.4
TCN2-206ENST00000471659 UNC13AQ9UPW8 1703 aa17.5■□□□□ 0.39
TCN2-206ENST00000471659 DCAF8L2P0C7V8 631 aa17.48■□□□□ 0.39
TCN2-206ENST00000471659 MYO15BQ96JP2 1530 aa17.43■□□□□ 0.38
TCN2-206ENST00000471659 BICRAQ9NZM4 1560 aa17.39■□□□□ 0.37
TCN2-206ENST00000471659 SHROOM4Q9ULL8 1493 aa17.21■□□□□ 0.35
TCN2-206ENST00000471659 CECR2Q9BXF3 1484 aa17.11■□□□□ 0.33
TCN2-206ENST00000471659 CC2D2AQ9P2K1 1620 aa17.1■□□□□ 0.33
TCN2-206ENST00000471659 DCAF1Q9Y4B6 1507 aa17.07■□□□□ 0.32
TCN2-206ENST00000471659 ZCCHC6Q5VYS8 1495 aaKnown RBP17■□□□□ 0.31
TCN2-206ENST00000471659 EIF4G1Q04637 1599 aaKnown RBP16.98■□□□□ 0.31
TCN2-206ENST00000471659 SCRIBQ14160 1630 aa16.92■□□□□ 0.3
TCN2-206ENST00000471659 DNAJC5Q9H3Z4 198 aa16.87■□□□□ 0.29
TCN2-206ENST00000471659 CUX2O14529 1486 aa16.51■□□□□ 0.23
TCN2-206ENST00000471659 NCAPD3P42695 1498 aa16.38■□□□□ 0.21
TCN2-206ENST00000471659 ERCC6Q03468 1493 aa16.38■□□□□ 0.21
TCN2-206ENST00000471659 ATAD2BQ9ULI0 1458 aa16.25■□□□□ 0.19
TCN2-206ENST00000471659 SMARCA2P51531 1590 aa16.22■□□□□ 0.19
TCN2-206ENST00000471659 HMGXB3Q12766 1538 aa16.22■□□□□ 0.19
TCN2-206ENST00000471659 NESP48681 1621 aa16.15■□□□□ 0.18
TCN2-206ENST00000471659 SMARCA4P51532 1647 aa16.15■□□□□ 0.18
TCN2-206ENST00000471659 THOC2Q8NI27 1593 aaKnown RBP16.09■□□□□ 0.17
TCN2-206ENST00000471659 BAZ1BQ9UIG0 1483 aaKnown RBP16.07■□□□□ 0.16
TCN2-206ENST00000471659 LAMC3Q9Y6N6 1575 aa16.06■□□□□ 0.16
TCN2-206ENST00000471659 BAZ1AQ9NRL2 1556 aaPredicted RBP16.04■□□□□ 0.16
TCN2-206ENST00000471659 PEG3Q9GZU2 1588 aa16.04■□□□□ 0.16
TCN2-206ENST00000471659 PDS5BQ9NTI5 1447 aa15.98■□□□□ 0.15
TCN2-206ENST00000471659 KIF21AQ7Z4S6 1674 aa15.95■□□□□ 0.14
TCN2-206ENST00000471659 TRIM41Q8WV44 630 aa15.9■□□□□ 0.14
TCN2-206ENST00000471659 MROH2BQ7Z745 1585 aa15.85■□□□□ 0.13
TCN2-206ENST00000471659 CADPSQ9ULU8 1353 aa15.85■□□□□ 0.13
TCN2-206ENST00000471659 MRC2Q9UBG0 1479 aa15.83■□□□□ 0.12
TCN2-206ENST00000471659 WDR62O43379 1518 aa15.81■□□□□ 0.12
TCN2-206ENST00000471659 CEP164Q9UPV0 1460 aa15.7■□□□□ 0.1
TCN2-206ENST00000471659 OSCARQ8IYS5 282 aa15.69■□□□□ 0.1
TCN2-206ENST00000471659 FANCD2Q9BXW9 1451 aa15.65■□□□□ 0.1
TCN2-206ENST00000471659 WIZO95785 1651 aa15.64■□□□□ 0.09
TCN2-206ENST00000471659 CFTRP13569 1480 aa15.6■□□□□ 0.09
TCN2-206ENST00000471659 URB2Q14146 1524 aaKnown RBP15.53■□□□□ 0.08
TCN2-206ENST00000471659 RIMBP3CA6NJZ7 1639 aa15.5■□□□□ 0.07
TCN2-206ENST00000471659 RIMBP3BA6NNM3 1639 aa15.5■□□□□ 0.07
TCN2-206ENST00000471659 RIMBP3Q9UFD9 1639 aa15.5■□□□□ 0.07
TCN2-206ENST00000471659 TOP2AP11388 1531 aaKnown RBP15.45■□□□□ 0.06
TCN2-206ENST00000471659 PRDM2Q13029 1718 aa15.44■□□□□ 0.06
TCN2-206ENST00000471659 IFT140Q96RY7 1462 aa15.41■□□□□ 0.06
TCN2-206ENST00000471659 ARHGEF11O15085 1522 aa15.41■□□□□ 0.06
TCN2-206ENST00000471659 RSF1Q96T23 1441 aaPredicted RBP15.41■□□□□ 0.06
TCN2-206ENST00000471659 ZNF608Q9ULD9 1512 aaPredicted RBP15.38■□□□□ 0.05
TCN2-206ENST00000471659 ABCC8Q09428 1581 aa15.33■□□□□ 0.05
TCN2-206ENST00000471659 TOPBP1Q92547 1522 aa15.32■□□□□ 0.04
TCN2-206ENST00000471659 CYB5RLQ6IPT4 315 aa15.31■□□□□ 0.04
TCN2-206ENST00000471659 EIF4G3O43432 1585 aaKnown RBP15.29■□□□□ 0.04
TCN2-206ENST00000471659 CCDC88BA6NC98 1476 aa15.27■□□□□ 0.03
TCN2-206ENST00000471659 DNMBPQ6XZF7 1577 aa15.24■□□□□ 0.03
TCN2-206ENST00000471659 CHD1O14646 1710 aa15.24■□□□□ 0.03
TCN2-206ENST00000471659 TRHP20396 242 aaPredicted RBP15.23■□□□□ 0.03
TCN2-206ENST00000471659 ARAP1Q96P48 1450 aa15.22■□□□□ 0.03
TCN2-206ENST00000471659 TARBP1Q13395 1621 aaKnown RBP15.22■□□□□ 0.03
TCN2-206ENST00000471659 AQRO60306 1485 aaKnown RBP eCLIP15.2■□□□□ 0.02
TCN2-206ENST00000471659 FBLN2P98095 1184 aa15.16■□□□□ 0.02
TCN2-206ENST00000471659 POLA1P09884 1462 aaPredicted RBP15.13■□□□□ 0.01
TCN2-206ENST00000471659 WDR97A6NE52 1622 aa15.1■□□□□ 0.01
TCN2-206ENST00000471659 SOGA1O94964 1423 aa15.08■□□□□ 0
TCN2-206ENST00000471659 CLASP1Q7Z460 1538 aa15.07■□□□□ 0
TCN2-206ENST00000471659 AEBP2Q6ZN18 517 aaPredicted RBP15.06■□□□□ 0
TCN2-206ENST00000471659 TDRD9Q8NDG6 1382 aaKnown RBP15.05■□□□□ -0
TCN2-206ENST00000471659 RAD54L2Q9Y4B4 1467 aa15.05■□□□□ -0
TCN2-206ENST00000471659 SYNJ1O43426 1573 aa15.05■□□□□ -0
TCN2-206ENST00000471659 MAGI1Q96QZ7 1491 aaPredicted RBP15.04■□□□□ -0
TCN2-206ENST00000471659 SNAPC4Q5SXM2 1469 aa15.03■□□□□ -0
TCN2-206ENST00000471659 CHMP7Q8WUX9 453 aaPredicted RBP15.03■□□□□ -0
TCN2-206ENST00000471659 GRIN2BQ13224 1484 aa14.99□□□□□ -0.01
TCN2-206ENST00000471659 SYNJ2O15056 1496 aa14.98□□□□□ -0.01
TCN2-206ENST00000471659 FGD5Q6ZNL6 1462 aa14.98□□□□□ -0.01
TCN2-206ENST00000471659 GAPVD1Q14C86 1478 aa14.93□□□□□ -0.02
TCN2-206ENST00000471659 CUX1P39880 1505 aa14.92□□□□□ -0.02
TCN2-206ENST00000471659 PBRM1Q86U86 1689 aa14.89□□□□□ -0.03
TCN2-206ENST00000471659 ABCA10Q8WWZ4 1543 aa14.83□□□□□ -0.04
TCN2-206ENST00000471659 ABCA5Q8WWZ7 1642 aa14.83□□□□□ -0.04
TCN2-206ENST00000471659 GRIN2AQ12879 1464 aa14.78□□□□□ -0.04
TCN2-206ENST00000471659 ERCC6L2Q5T890 1561 aa14.77□□□□□ -0.05
TCN2-206ENST00000471659 CEP170Q5SW79 1584 aa14.76□□□□□ -0.05
TCN2-206ENST00000471659 NUP160Q12769 1436 aa14.75□□□□□ -0.05
TCN2-206ENST00000471659 SHROOM2Q13796 1616 aa14.75□□□□□ -0.05
TCN2-206ENST00000471659 WRNQ14191 1432 aaPredicted RBP eCLIP14.72□□□□□ -0.05
TCN2-206ENST00000471659 ADAMTS12P58397 1594 aa14.72□□□□□ -0.05
TCN2-206ENST00000471659 KIF13AQ9H1H9 1805 aa14.71□□□□□ -0.05
TCN2-206ENST00000471659 FHAD1B1AJZ9 1412 aa14.69□□□□□ -0.06
TCN2-206ENST00000471659 ERICH3Q5RHP9 1530 aa14.65□□□□□ -0.06
TCN2-206ENST00000471659 PRG4Q92954 1404 aaPredicted RBP14.63□□□□□ -0.07
TCN2-206ENST00000471659 BIVM-ERCC5R4GMW8 1640 aa14.63□□□□□ -0.07
TCN2-206ENST00000471659 TOP2BQ02880 1626 aa14.62□□□□□ -0.07
TCN2-206ENST00000471659 JPH4Q96JJ6 628 aa14.6□□□□□ -0.07
TCN2-206ENST00000471659 ABCC10Q5T3U5 1492 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms