RNA–Protein interactions for RNA: ENST00000471655.1

VPS8-221, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 434 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-221ENST00000471655 NISCHQ9Y2I1 1504 aa37.08■■■■□ 3.53
VPS8-221ENST00000471655 CCDC180Q9P1Z9 1646 aa33.14■■■□□ 2.9
VPS8-221ENST00000471655 ABCC9O60706 1549 aa32.75■■■□□ 2.83
VPS8-221ENST00000471655 RB1CC1Q8TDY2 1594 aa31.39■■■□□ 2.61
VPS8-221ENST00000471655 NACADO15069 1562 aa31.27■■■□□ 2.6
VPS8-221ENST00000471655 DCAF8L2P0C7V8 631 aa31.07■■■□□ 2.56
VPS8-221ENST00000471655 MYO15BQ96JP2 1530 aa31.02■■■□□ 2.56
VPS8-221ENST00000471655 ZCCHC6Q5VYS8 1495 aaKnown RBP30.8■■■□□ 2.52
VPS8-221ENST00000471655 DCAF1Q9Y4B6 1507 aa30.72■■■□□ 2.51
VPS8-221ENST00000471655 UNC13AQ9UPW8 1703 aa30.61■■■□□ 2.49
VPS8-221ENST00000471655 PABPN1Q86U42 306 aaKnown RBP eCLIP30.54■■■□□ 2.48
VPS8-221ENST00000471655 DNAJC5BQ9UF47 199 aa30.47■■■□□ 2.47
VPS8-221ENST00000471655 BICRAQ9NZM4 1560 aa30.45■■■□□ 2.46
VPS8-221ENST00000471655 SHROOM4Q9ULL8 1493 aa30.16■■■□□ 2.42
VPS8-221ENST00000471655 SCRIBQ14160 1630 aa30.13■■■□□ 2.41
VPS8-221ENST00000471655 EIF4G1Q04637 1599 aaKnown RBP29.66■■■□□ 2.34
VPS8-221ENST00000471655 CC2D2AQ9P2K1 1620 aa29.63■■■□□ 2.33
VPS8-221ENST00000471655 CECR2Q9BXF3 1484 aa29.5■■■□□ 2.31
VPS8-221ENST00000471655 NCAPD3P42695 1498 aa28.89■■■□□ 2.22
VPS8-221ENST00000471655 SMARCA4P51532 1647 aa28.83■■■□□ 2.21
VPS8-221ENST00000471655 ATAD2BQ9ULI0 1458 aa28.8■■■□□ 2.2
VPS8-221ENST00000471655 BAZ1AQ9NRL2 1556 aaPredicted RBP28.76■■■□□ 2.19
VPS8-221ENST00000471655 SMARCA2P51531 1590 aa28.75■■■□□ 2.19
VPS8-221ENST00000471655 HMGXB3Q12766 1538 aa28.67■■■□□ 2.18
VPS8-221ENST00000471655 PEG3Q9GZU2 1588 aa28.62■■■□□ 2.17
VPS8-221ENST00000471655 MROH2BQ7Z745 1585 aa28.54■■■□□ 2.16
VPS8-221ENST00000471655 BAZ1BQ9UIG0 1483 aaKnown RBP28.52■■■□□ 2.16
VPS8-221ENST00000471655 ERCC6Q03468 1493 aa28.27■■■□□ 2.12
VPS8-221ENST00000471655 NESP48681 1621 aa28.22■■■□□ 2.11
VPS8-221ENST00000471655 WIZO95785 1651 aa28.19■■■□□ 2.1
VPS8-221ENST00000471655 CUX2O14529 1486 aa28.17■■■□□ 2.1
VPS8-221ENST00000471655 LAMC3Q9Y6N6 1575 aa28.16■■■□□ 2.1
VPS8-221ENST00000471655 RSF1Q96T23 1441 aaPredicted RBP28.09■■■□□ 2.09
VPS8-221ENST00000471655 CADPSQ9ULU8 1353 aa27.99■■■□□ 2.07
VPS8-221ENST00000471655 PDS5BQ9NTI5 1447 aa27.99■■■□□ 2.07
VPS8-221ENST00000471655 THOC2Q8NI27 1593 aaKnown RBP27.9■■■□□ 2.06
VPS8-221ENST00000471655 TOP2AP11388 1531 aaKnown RBP27.9■■■□□ 2.06
VPS8-221ENST00000471655 KIF21AQ7Z4S6 1674 aa27.87■■■□□ 2.05
VPS8-221ENST00000471655 DNAJC5Q9H3Z4 198 aa27.8■■■□□ 2.04
VPS8-221ENST00000471655 CFTRP13569 1480 aa27.75■■■□□ 2.03
VPS8-221ENST00000471655 MRC2Q9UBG0 1479 aa27.7■■■□□ 2.02
VPS8-221ENST00000471655 FANCD2Q9BXW9 1451 aa27.64■■■□□ 2.02
VPS8-221ENST00000471655 CEP164Q9UPV0 1460 aa27.64■■■□□ 2.02
VPS8-221ENST00000471655 WDR62O43379 1518 aa27.62■■■□□ 2.01
VPS8-221ENST00000471655 CCDC88BA6NC98 1476 aa27.58■■■□□ 2.01
VPS8-221ENST00000471655 PRDM2Q13029 1718 aa27.46■■□□□ 1.99
VPS8-221ENST00000471655 URB2Q14146 1524 aaKnown RBP27.39■■□□□ 1.98
VPS8-221ENST00000471655 ABCC8Q09428 1581 aa27.19■■□□□ 1.94
VPS8-221ENST00000471655 TOPBP1Q92547 1522 aa27.16■■□□□ 1.94
VPS8-221ENST00000471655 IFT140Q96RY7 1462 aa27.11■■□□□ 1.93
VPS8-221ENST00000471655 DNMBPQ6XZF7 1577 aa27.09■■□□□ 1.93
VPS8-221ENST00000471655 SUPT5HO00267 1087 aaKnown RBP27.01■■□□□ 1.91
VPS8-221ENST00000471655 ZNF608Q9ULD9 1512 aaPredicted RBP26.98■■□□□ 1.91
VPS8-221ENST00000471655 OSCARQ8IYS5 282 aa26.94■■□□□ 1.9
VPS8-221ENST00000471655 POLA1P09884 1462 aaPredicted RBP26.9■■□□□ 1.9
VPS8-221ENST00000471655 TARBP1Q13395 1621 aaKnown RBP26.9■■□□□ 1.9
VPS8-221ENST00000471655 EIF4G3O43432 1585 aaKnown RBP26.84■■□□□ 1.89
VPS8-221ENST00000471655 SOGA1O94964 1423 aa26.8■■□□□ 1.88
VPS8-221ENST00000471655 CUX1P39880 1505 aa26.8■■□□□ 1.88
VPS8-221ENST00000471655 AQRO60306 1485 aaKnown RBP eCLIP26.79■■□□□ 1.88
VPS8-221ENST00000471655 FGD5Q6ZNL6 1462 aa26.77■■□□□ 1.88
VPS8-221ENST00000471655 RAD54L2Q9Y4B4 1467 aa26.77■■□□□ 1.88
VPS8-221ENST00000471655 WDR97A6NE52 1622 aa26.71■■□□□ 1.87
VPS8-221ENST00000471655 TDRD9Q8NDG6 1382 aaKnown RBP26.68■■□□□ 1.86
VPS8-221ENST00000471655 TRIM41Q8WV44 630 aa26.6■■□□□ 1.85
VPS8-221ENST00000471655 CHD1O14646 1710 aa26.56■■□□□ 1.84
VPS8-221ENST00000471655 GRIN2BQ13224 1484 aa26.54■■□□□ 1.84
VPS8-221ENST00000471655 ABCA10Q8WWZ4 1543 aa26.52■■□□□ 1.84
VPS8-221ENST00000471655 SNAPC4Q5SXM2 1469 aa26.51■■□□□ 1.83
VPS8-221ENST00000471655 MAGI1Q96QZ7 1491 aaPredicted RBP26.51■■□□□ 1.83
VPS8-221ENST00000471655 FBLN2P98095 1184 aa26.51■■□□□ 1.83
VPS8-221ENST00000471655 RIMBP3CA6NJZ7 1639 aa26.5■■□□□ 1.83
VPS8-221ENST00000471655 RIMBP3BA6NNM3 1639 aa26.5■■□□□ 1.83
VPS8-221ENST00000471655 RIMBP3Q9UFD9 1639 aa26.5■■□□□ 1.83
VPS8-221ENST00000471655 WRNQ14191 1432 aaPredicted RBP eCLIP26.49■■□□□ 1.83
VPS8-221ENST00000471655 GAPVD1Q14C86 1478 aa26.48■■□□□ 1.83
VPS8-221ENST00000471655 TOP2BQ02880 1626 aa26.47■■□□□ 1.83
VPS8-221ENST00000471655 BIVM-ERCC5R4GMW8 1640 aa26.47■■□□□ 1.83
VPS8-221ENST00000471655 ARHGEF11O15085 1522 aa26.45■■□□□ 1.83
VPS8-221ENST00000471655 CHMP7Q8WUX9 453 aaPredicted RBP26.43■■□□□ 1.82
VPS8-221ENST00000471655 ABCA5Q8WWZ7 1642 aa26.43■■□□□ 1.82
VPS8-221ENST00000471655 SYNJ1O43426 1573 aa26.41■■□□□ 1.82
VPS8-221ENST00000471655 SYNJ2O15056 1496 aa26.41■■□□□ 1.82
VPS8-221ENST00000471655 PBRM1Q86U86 1689 aa26.4■■□□□ 1.82
VPS8-221ENST00000471655 CLASP1Q7Z460 1538 aa26.33■■□□□ 1.81
VPS8-221ENST00000471655 CYB5RLQ6IPT4 315 aa26.24■■□□□ 1.79
VPS8-221ENST00000471655 ARAP1Q96P48 1450 aa26.22■■□□□ 1.79
VPS8-221ENST00000471655 ERICH3Q5RHP9 1530 aa26.2■■□□□ 1.79
VPS8-221ENST00000471655 ADAMTS12P58397 1594 aa26.19■■□□□ 1.78
VPS8-221ENST00000471655 GRIN2AQ12879 1464 aa26.18■■□□□ 1.78
VPS8-221ENST00000471655 FHAD1B1AJZ9 1412 aa26.17■■□□□ 1.78
VPS8-221ENST00000471655 NUP160Q12769 1436 aa26.11■■□□□ 1.77
VPS8-221ENST00000471655 CEP170Q5SW79 1584 aa26.05■■□□□ 1.76
VPS8-221ENST00000471655 KIF27Q86VH2 1401 aa25.98■■□□□ 1.75
VPS8-221ENST00000471655 IGF1RP08069 1367 aa25.95■■□□□ 1.74
VPS8-221ENST00000471655 SHROOM2Q13796 1616 aa25.94■■□□□ 1.74
VPS8-221ENST00000471655 ERCC6L2Q5T890 1561 aa25.89■■□□□ 1.73
VPS8-221ENST00000471655 CUL7Q14999 1698 aa25.86■■□□□ 1.73
VPS8-221ENST00000471655 JPH4Q96JJ6 628 aa25.84■■□□□ 1.73
VPS8-221ENST00000471655 TRHP20396 242 aaPredicted RBP25.82■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 97.8 ms