RNA–Protein interactions for RNA: ENST00000471624.1

C4A-252, Transcript of complement C4A (Rodgers blood group), humanhuman

TSL 2

Gene C4A, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4A-252ENST00000471624 NISCHQ9Y2I1 1504 aa48.79■■■■■ 5.4
C4A-252ENST00000471624 CCDC180Q9P1Z9 1646 aa43.64■■■■■ 4.58
C4A-252ENST00000471624 ABCC9O60706 1549 aa43.6■■■■■ 4.57
C4A-252ENST00000471624 RB1CC1Q8TDY2 1594 aa41.5■■■■■ 4.23
C4A-252ENST00000471624 NACADO15069 1562 aa41.25■■■■■ 4.19
C4A-252ENST00000471624 DCAF8L2P0C7V8 631 aa41.21■■■■■ 4.19
C4A-252ENST00000471624 DNAJC5BQ9UF47 199 aa40.85■■■■■ 4.13
C4A-252ENST00000471624 MYO15BQ96JP2 1530 aa40.71■■■■■ 4.11
C4A-252ENST00000471624 PABPN1Q86U42 306 aaKnown RBP eCLIP40.67■■■■■ 4.1
C4A-252ENST00000471624 UNC13AQ9UPW8 1703 aa40.58■■■■■ 4.09
C4A-252ENST00000471624 ZCCHC6Q5VYS8 1495 aaKnown RBP40.45■■■■■ 4.07
C4A-252ENST00000471624 BICRAQ9NZM4 1560 aa40.34■■■■■ 4.05
C4A-252ENST00000471624 DCAF1Q9Y4B6 1507 aa40.26■■■■■ 4.03
C4A-252ENST00000471624 SCRIBQ14160 1630 aa39.85■■■■□ 3.97
C4A-252ENST00000471624 SHROOM4Q9ULL8 1493 aa39.7■■■■□ 3.95
C4A-252ENST00000471624 CC2D2AQ9P2K1 1620 aa39.36■■■■□ 3.89
C4A-252ENST00000471624 EIF4G1Q04637 1599 aaKnown RBP39.31■■■■□ 3.88
C4A-252ENST00000471624 CECR2Q9BXF3 1484 aa39.24■■■■□ 3.87
C4A-252ENST00000471624 NCAPD3P42695 1498 aa38.11■■■■□ 3.69
C4A-252ENST00000471624 ATAD2BQ9ULI0 1458 aa38.03■■■■□ 3.68
C4A-252ENST00000471624 SMARCA4P51532 1647 aa38.01■■■■□ 3.68
C4A-252ENST00000471624 SMARCA2P51531 1590 aa37.89■■■■□ 3.66
C4A-252ENST00000471624 BAZ1AQ9NRL2 1556 aaPredicted RBP37.83■■■■□ 3.65
C4A-252ENST00000471624 HMGXB3Q12766 1538 aa37.81■■■■□ 3.64
C4A-252ENST00000471624 BAZ1BQ9UIG0 1483 aaKnown RBP37.65■■■■□ 3.62
C4A-252ENST00000471624 MROH2BQ7Z745 1585 aa37.63■■■■□ 3.61
C4A-252ENST00000471624 PEG3Q9GZU2 1588 aa37.62■■■■□ 3.61
C4A-252ENST00000471624 ERCC6Q03468 1493 aa37.59■■■■□ 3.61
C4A-252ENST00000471624 NESP48681 1621 aa37.52■■■■□ 3.6
C4A-252ENST00000471624 CUX2O14529 1486 aa37.44■■■■□ 3.58
C4A-252ENST00000471624 DNAJC5Q9H3Z4 198 aa37.32■■■■□ 3.56
C4A-252ENST00000471624 LAMC3Q9Y6N6 1575 aa37.19■■■■□ 3.54
C4A-252ENST00000471624 WIZO95785 1651 aa37.18■■■■□ 3.54
C4A-252ENST00000471624 THOC2Q8NI27 1593 aaKnown RBP37.04■■■■□ 3.52
C4A-252ENST00000471624 PDS5BQ9NTI5 1447 aa37■■■■□ 3.51
C4A-252ENST00000471624 KIF21AQ7Z4S6 1674 aa36.99■■■■□ 3.51
C4A-252ENST00000471624 CADPSQ9ULU8 1353 aa36.98■■■■□ 3.51
C4A-252ENST00000471624 RSF1Q96T23 1441 aaPredicted RBP36.91■■■■□ 3.5
C4A-252ENST00000471624 TOP2AP11388 1531 aaKnown RBP36.68■■■■□ 3.46
C4A-252ENST00000471624 MRC2Q9UBG0 1479 aa36.68■■■■□ 3.46
C4A-252ENST00000471624 CFTRP13569 1480 aa36.58■■■■□ 3.45
C4A-252ENST00000471624 WDR62O43379 1518 aa36.57■■■■□ 3.44
C4A-252ENST00000471624 FANCD2Q9BXW9 1451 aa36.55■■■■□ 3.44
C4A-252ENST00000471624 CEP164Q9UPV0 1460 aa36.55■■■■□ 3.44
C4A-252ENST00000471624 CCDC88BA6NC98 1476 aa36.31■■■■□ 3.4
C4A-252ENST00000471624 URB2Q14146 1524 aaKnown RBP36.26■■■■□ 3.4
C4A-252ENST00000471624 PRDM2Q13029 1718 aa36.15■■■■□ 3.38
C4A-252ENST00000471624 TOPBP1Q92547 1522 aa35.88■■■■□ 3.33
C4A-252ENST00000471624 OSCARQ8IYS5 282 aa35.83■■■■□ 3.33
C4A-252ENST00000471624 IFT140Q96RY7 1462 aa35.82■■■■□ 3.32
C4A-252ENST00000471624 ZNF608Q9ULD9 1512 aaPredicted RBP35.81■■■■□ 3.32
C4A-252ENST00000471624 TRIM41Q8WV44 630 aa35.78■■■■□ 3.32
C4A-252ENST00000471624 ABCC8Q09428 1581 aa35.76■■■■□ 3.31
C4A-252ENST00000471624 DNMBPQ6XZF7 1577 aa35.73■■■■□ 3.31
C4A-252ENST00000471624 EIF4G3O43432 1585 aaKnown RBP35.55■■■■□ 3.28
C4A-252ENST00000471624 TARBP1Q13395 1621 aaKnown RBP35.54■■■■□ 3.28
C4A-252ENST00000471624 POLA1P09884 1462 aaPredicted RBP35.53■■■■□ 3.28
C4A-252ENST00000471624 AQRO60306 1485 aaKnown RBP eCLIP35.51■■■■□ 3.28
C4A-252ENST00000471624 SUPT5HO00267 1087 aaKnown RBP35.45■■■■□ 3.27
C4A-252ENST00000471624 RAD54L2Q9Y4B4 1467 aa35.44■■■■□ 3.26
C4A-252ENST00000471624 SOGA1O94964 1423 aa35.38■■■■□ 3.25
C4A-252ENST00000471624 CUX1P39880 1505 aa35.33■■■■□ 3.25
C4A-252ENST00000471624 TDRD9Q8NDG6 1382 aaKnown RBP35.33■■■■□ 3.25
C4A-252ENST00000471624 FGD5Q6ZNL6 1462 aa35.33■■■■□ 3.25
C4A-252ENST00000471624 RIMBP3CA6NJZ7 1639 aa35.32■■■■□ 3.24
C4A-252ENST00000471624 RIMBP3BA6NNM3 1639 aa35.32■■■■□ 3.24
C4A-252ENST00000471624 RIMBP3Q9UFD9 1639 aa35.32■■■■□ 3.24
C4A-252ENST00000471624 CHD1O14646 1710 aa35.26■■■■□ 3.24
C4A-252ENST00000471624 FBLN2P98095 1184 aa35.26■■■■□ 3.24
C4A-252ENST00000471624 ARHGEF11O15085 1522 aa35.22■■■■□ 3.23
C4A-252ENST00000471624 SNAPC4Q5SXM2 1469 aa35.11■■■■□ 3.21
C4A-252ENST00000471624 WDR97A6NE52 1622 aa35.11■■■■□ 3.21
C4A-252ENST00000471624 GRIN2BQ13224 1484 aa35.03■■■■□ 3.2
C4A-252ENST00000471624 CYB5RLQ6IPT4 315 aa35.01■■■■□ 3.2
C4A-252ENST00000471624 CHMP7Q8WUX9 453 aaPredicted RBP35■■■■□ 3.19
C4A-252ENST00000471624 MAGI1Q96QZ7 1491 aaPredicted RBP34.99■■■■□ 3.19
C4A-252ENST00000471624 GAPVD1Q14C86 1478 aa34.94■■■■□ 3.18
C4A-252ENST00000471624 ABCA10Q8WWZ4 1543 aa34.91■■■■□ 3.18
C4A-252ENST00000471624 ARAP1Q96P48 1450 aa34.9■■■■□ 3.18
C4A-252ENST00000471624 SYNJ2O15056 1496 aa34.89■■■■□ 3.18
C4A-252ENST00000471624 CLASP1Q7Z460 1538 aa34.87■■■■□ 3.17
C4A-252ENST00000471624 PBRM1Q86U86 1689 aa34.87■■■■□ 3.17
C4A-252ENST00000471624 ABCA5Q8WWZ7 1642 aa34.84■■■■□ 3.17
C4A-252ENST00000471624 SYNJ1O43426 1573 aa34.84■■■■□ 3.17
C4A-252ENST00000471624 WRNQ14191 1432 aaPredicted RBP eCLIP34.81■■■■□ 3.16
C4A-252ENST00000471624 TOP2BQ02880 1626 aa34.77■■■■□ 3.16
C4A-252ENST00000471624 BIVM-ERCC5R4GMW8 1640 aa34.76■■■■□ 3.15
C4A-252ENST00000471624 GRIN2AQ12879 1464 aa34.58■■■■□ 3.13
C4A-252ENST00000471624 ADAMTS12P58397 1594 aa34.57■■■■□ 3.12
C4A-252ENST00000471624 TRHP20396 242 aaPredicted RBP34.56■■■■□ 3.12
C4A-252ENST00000471624 FHAD1B1AJZ9 1412 aa34.49■■■■□ 3.11
C4A-252ENST00000471624 NUP160Q12769 1436 aa34.47■■■■□ 3.11
C4A-252ENST00000471624 ERICH3Q5RHP9 1530 aa34.46■■■■□ 3.11
C4A-252ENST00000471624 CEP170Q5SW79 1584 aa34.46■■■■□ 3.11
C4A-252ENST00000471624 ERCC6L2Q5T890 1561 aa34.4■■■■□ 3.1
C4A-252ENST00000471624 SHROOM2Q13796 1616 aa34.27■■■■□ 3.08
C4A-252ENST00000471624 JPH4Q96JJ6 628 aa34.15■■■■□ 3.06
C4A-252ENST00000471624 PRG4Q92954 1404 aaPredicted RBP34.14■■■■□ 3.06
C4A-252ENST00000471624 IGF1RP08069 1367 aa34.13■■■■□ 3.05
C4A-252ENST00000471624 KIF27Q86VH2 1401 aa34.11■■■■□ 3.05
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms