RNA–Protein interactions for RNA: ENST00000471613.1

KLHDC9-205, Transcript of kelch domain containing 9, humanhuman

TSL 2

Gene KLHDC9, Length 776 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC9-205ENST00000471613 NISCHQ9Y2I1 1504 aa52.13■■■■■ 5.94
KLHDC9-205ENST00000471613 CCDC180Q9P1Z9 1646 aa46.63■■■■■ 5.06
KLHDC9-205ENST00000471613 ABCC9O60706 1549 aa45.98■■■■■ 4.95
KLHDC9-205ENST00000471613 RB1CC1Q8TDY2 1594 aa44.08■■■■■ 4.65
KLHDC9-205ENST00000471613 NACADO15069 1562 aa43.9■■■■■ 4.62
KLHDC9-205ENST00000471613 DCAF8L2P0C7V8 631 aa43.73■■■■■ 4.59
KLHDC9-205ENST00000471613 MYO15BQ96JP2 1530 aa43.46■■■■■ 4.55
KLHDC9-205ENST00000471613 ZCCHC6Q5VYS8 1495 aaKnown RBP43.33■■■■■ 4.53
KLHDC9-205ENST00000471613 UNC13AQ9UPW8 1703 aa43.14■■■■■ 4.5
KLHDC9-205ENST00000471613 DCAF1Q9Y4B6 1507 aa43.12■■■■■ 4.49
KLHDC9-205ENST00000471613 PABPN1Q86U42 306 aaKnown RBP eCLIP42.85■■■■■ 4.45
KLHDC9-205ENST00000471613 BICRAQ9NZM4 1560 aa42.72■■■■■ 4.43
KLHDC9-205ENST00000471613 DNAJC5BQ9UF47 199 aa42.53■■■■■ 4.4
KLHDC9-205ENST00000471613 SCRIBQ14160 1630 aa42.49■■■■■ 4.39
KLHDC9-205ENST00000471613 SHROOM4Q9ULL8 1493 aa42.24■■■■■ 4.35
KLHDC9-205ENST00000471613 EIF4G1Q04637 1599 aaKnown RBP41.65■■■■■ 4.26
KLHDC9-205ENST00000471613 CC2D2AQ9P2K1 1620 aa41.61■■■■■ 4.25
KLHDC9-205ENST00000471613 CECR2Q9BXF3 1484 aa41.36■■■■■ 4.21
KLHDC9-205ENST00000471613 SMARCA4P51532 1647 aa40.59■■■■■ 4.09
KLHDC9-205ENST00000471613 BAZ1AQ9NRL2 1556 aaPredicted RBP40.47■■■■■ 4.07
KLHDC9-205ENST00000471613 NCAPD3P42695 1498 aa40.45■■■■■ 4.07
KLHDC9-205ENST00000471613 ATAD2BQ9ULI0 1458 aa40.42■■■■■ 4.06
KLHDC9-205ENST00000471613 SMARCA2P51531 1590 aa40.4■■■■■ 4.06
KLHDC9-205ENST00000471613 HMGXB3Q12766 1538 aa40.26■■■■■ 4.04
KLHDC9-205ENST00000471613 PEG3Q9GZU2 1588 aa40.18■■■■■ 4.02
KLHDC9-205ENST00000471613 MROH2BQ7Z745 1585 aa40.16■■■■■ 4.02
KLHDC9-205ENST00000471613 BAZ1BQ9UIG0 1483 aaKnown RBP40.11■■■■■ 4.01
KLHDC9-205ENST00000471613 WIZO95785 1651 aa39.76■■■■□ 3.96
KLHDC9-205ENST00000471613 ERCC6Q03468 1493 aa39.7■■■■□ 3.95
KLHDC9-205ENST00000471613 NESP48681 1621 aa39.65■■■■□ 3.94
KLHDC9-205ENST00000471613 LAMC3Q9Y6N6 1575 aa39.53■■■■□ 3.92
KLHDC9-205ENST00000471613 RSF1Q96T23 1441 aaPredicted RBP39.51■■■■□ 3.92
KLHDC9-205ENST00000471613 CUX2O14529 1486 aa39.43■■■■□ 3.9
KLHDC9-205ENST00000471613 TOP2AP11388 1531 aaKnown RBP39.29■■■■□ 3.88
KLHDC9-205ENST00000471613 KIF21AQ7Z4S6 1674 aa39.25■■■■□ 3.87
KLHDC9-205ENST00000471613 CADPSQ9ULU8 1353 aa39.25■■■■□ 3.87
KLHDC9-205ENST00000471613 PDS5BQ9NTI5 1447 aa39.24■■■■□ 3.87
KLHDC9-205ENST00000471613 THOC2Q8NI27 1593 aaKnown RBP39.19■■■■□ 3.86
KLHDC9-205ENST00000471613 CFTRP13569 1480 aa38.94■■■■□ 3.82
KLHDC9-205ENST00000471613 MRC2Q9UBG0 1479 aa38.87■■■■□ 3.81
KLHDC9-205ENST00000471613 CEP164Q9UPV0 1460 aa38.85■■■■□ 3.81
KLHDC9-205ENST00000471613 FANCD2Q9BXW9 1451 aa38.84■■■■□ 3.81
KLHDC9-205ENST00000471613 CCDC88BA6NC98 1476 aa38.79■■■■□ 3.8
KLHDC9-205ENST00000471613 WDR62O43379 1518 aa38.78■■■■□ 3.8
KLHDC9-205ENST00000471613 PRDM2Q13029 1718 aa38.77■■■■□ 3.8
KLHDC9-205ENST00000471613 DNAJC5Q9H3Z4 198 aa38.68■■■■□ 3.78
KLHDC9-205ENST00000471613 URB2Q14146 1524 aaKnown RBP38.47■■■■□ 3.75
KLHDC9-205ENST00000471613 SUPT5HO00267 1087 aaKnown RBP38.19■■■■□ 3.7
KLHDC9-205ENST00000471613 TOPBP1Q92547 1522 aa38.17■■■■□ 3.7
KLHDC9-205ENST00000471613 ABCC8Q09428 1581 aa38.15■■■■□ 3.7
KLHDC9-205ENST00000471613 DNMBPQ6XZF7 1577 aa38.11■■■■□ 3.69
KLHDC9-205ENST00000471613 IFT140Q96RY7 1462 aa38.04■■■■□ 3.68
KLHDC9-205ENST00000471613 ZNF608Q9ULD9 1512 aaPredicted RBP37.89■■■■□ 3.66
KLHDC9-205ENST00000471613 TARBP1Q13395 1621 aaKnown RBP37.81■■■■□ 3.64
KLHDC9-205ENST00000471613 POLA1P09884 1462 aaPredicted RBP37.81■■■■□ 3.64
KLHDC9-205ENST00000471613 EIF4G3O43432 1585 aaKnown RBP37.79■■■■□ 3.64
KLHDC9-205ENST00000471613 CUX1P39880 1505 aa37.71■■■■□ 3.63
KLHDC9-205ENST00000471613 OSCARQ8IYS5 282 aa37.68■■■■□ 3.62
KLHDC9-205ENST00000471613 FGD5Q6ZNL6 1462 aa37.66■■■■□ 3.62
KLHDC9-205ENST00000471613 SOGA1O94964 1423 aa37.64■■■■□ 3.62
KLHDC9-205ENST00000471613 RAD54L2Q9Y4B4 1467 aa37.64■■■■□ 3.62
KLHDC9-205ENST00000471613 AQRO60306 1485 aaKnown RBP eCLIP37.61■■■■□ 3.61
KLHDC9-205ENST00000471613 WDR97A6NE52 1622 aa37.51■■■■□ 3.6
KLHDC9-205ENST00000471613 TDRD9Q8NDG6 1382 aaKnown RBP37.46■■■■□ 3.59
KLHDC9-205ENST00000471613 CHD1O14646 1710 aa37.44■■■■□ 3.58
KLHDC9-205ENST00000471613 BIVM-ERCC5R4GMW8 1640 aa37.32■■■■□ 3.57
KLHDC9-205ENST00000471613 WRNQ14191 1432 aaPredicted RBP eCLIP37.3■■■■□ 3.56
KLHDC9-205ENST00000471613 TOP2BQ02880 1626 aa37.3■■■■□ 3.56
KLHDC9-205ENST00000471613 SNAPC4Q5SXM2 1469 aa37.28■■■■□ 3.56
KLHDC9-205ENST00000471613 ABCA10Q8WWZ4 1543 aa37.27■■■■□ 3.56
KLHDC9-205ENST00000471613 FBLN2P98095 1184 aa37.27■■■■□ 3.56
KLHDC9-205ENST00000471613 GRIN2BQ13224 1484 aa37.26■■■■□ 3.56
KLHDC9-205ENST00000471613 SYNJ1O43426 1573 aa37.26■■■■□ 3.56
KLHDC9-205ENST00000471613 PBRM1Q86U86 1689 aa37.26■■■■□ 3.56
KLHDC9-205ENST00000471613 TRIM41Q8WV44 630 aa37.25■■■■□ 3.55
KLHDC9-205ENST00000471613 MAGI1Q96QZ7 1491 aaPredicted RBP37.23■■■■□ 3.55
KLHDC9-205ENST00000471613 GAPVD1Q14C86 1478 aa37.21■■■■□ 3.55
KLHDC9-205ENST00000471613 ABCA5Q8WWZ7 1642 aa37.2■■■■□ 3.55
KLHDC9-205ENST00000471613 RIMBP3CA6NJZ7 1639 aa37.19■■■■□ 3.54
KLHDC9-205ENST00000471613 RIMBP3BA6NNM3 1639 aa37.19■■■■□ 3.54
KLHDC9-205ENST00000471613 RIMBP3Q9UFD9 1639 aa37.19■■■■□ 3.54
KLHDC9-205ENST00000471613 ARHGEF11O15085 1522 aa37.1■■■■□ 3.53
KLHDC9-205ENST00000471613 CHMP7Q8WUX9 453 aaPredicted RBP37.09■■■■□ 3.53
KLHDC9-205ENST00000471613 SYNJ2O15056 1496 aa37.08■■■■□ 3.53
KLHDC9-205ENST00000471613 CLASP1Q7Z460 1538 aa36.95■■■■□ 3.51
KLHDC9-205ENST00000471613 ADAMTS12P58397 1594 aa36.87■■■■□ 3.49
KLHDC9-205ENST00000471613 ERICH3Q5RHP9 1530 aa36.84■■■■□ 3.49
KLHDC9-205ENST00000471613 GRIN2AQ12879 1464 aa36.79■■■■□ 3.48
KLHDC9-205ENST00000471613 FHAD1B1AJZ9 1412 aa36.76■■■■□ 3.47
KLHDC9-205ENST00000471613 ARAP1Q96P48 1450 aa36.75■■■■□ 3.47
KLHDC9-205ENST00000471613 CYB5RLQ6IPT4 315 aa36.75■■■■□ 3.47
KLHDC9-205ENST00000471613 CEP170Q5SW79 1584 aa36.65■■■■□ 3.46
KLHDC9-205ENST00000471613 NUP160Q12769 1436 aa36.62■■■■□ 3.45
KLHDC9-205ENST00000471613 KIF27Q86VH2 1401 aa36.56■■■■□ 3.44
KLHDC9-205ENST00000471613 CUL7Q14999 1698 aa36.47■■■■□ 3.43
KLHDC9-205ENST00000471613 SHROOM2Q13796 1616 aa36.45■■■■□ 3.42
KLHDC9-205ENST00000471613 IGF1RP08069 1367 aa36.42■■■■□ 3.42
KLHDC9-205ENST00000471613 ERCC6L2Q5T890 1561 aa36.4■■■■□ 3.42
KLHDC9-205ENST00000471613 RUSC2Q8N2Y8 1516 aa36.34■■■■□ 3.41
KLHDC9-205ENST00000471613 JPH4Q96JJ6 628 aa36.23■■■■□ 3.39
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms