RNA–Protein interactions for RNA: ENST00000471551.5

SLC1A4-202, Transcript of solute carrier family 1 member 4, humanhuman

TSL 4

Gene SLC1A4, Length 461 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A4-202ENST00000471551 NISCHQ9Y2I1 1504 aa29.62■■■□□ 2.33
SLC1A4-202ENST00000471551 ABCC9O60706 1549 aa26.84■■□□□ 1.89
SLC1A4-202ENST00000471551 CCDC180Q9P1Z9 1646 aa26.06■■□□□ 1.76
SLC1A4-202ENST00000471551 DNAJC5BQ9UF47 199 aa25.89■■□□□ 1.74
SLC1A4-202ENST00000471551 RB1CC1Q8TDY2 1594 aa25.14■■□□□ 1.61
SLC1A4-202ENST00000471551 PABPN1Q86U42 306 aaKnown RBP eCLIP24.95■■□□□ 1.58
SLC1A4-202ENST00000471551 ZCCHC6Q5VYS8 1495 aaKnown RBP24.85■■□□□ 1.57
SLC1A4-202ENST00000471551 NACADO15069 1562 aa24.82■■□□□ 1.56
SLC1A4-202ENST00000471551 DCAF8L2P0C7V8 631 aa24.67■■□□□ 1.54
SLC1A4-202ENST00000471551 UNC13AQ9UPW8 1703 aa24.64■■□□□ 1.54
SLC1A4-202ENST00000471551 DCAF1Q9Y4B6 1507 aa24.58■■□□□ 1.53
SLC1A4-202ENST00000471551 BICRAQ9NZM4 1560 aa24.57■■□□□ 1.52
SLC1A4-202ENST00000471551 MYO15BQ96JP2 1530 aa24.36■■□□□ 1.49
SLC1A4-202ENST00000471551 CECR2Q9BXF3 1484 aa24.2■■□□□ 1.47
SLC1A4-202ENST00000471551 CC2D2AQ9P2K1 1620 aa24.17■■□□□ 1.46
SLC1A4-202ENST00000471551 DNAJC5Q9H3Z4 198 aa24.1■■□□□ 1.45
SLC1A4-202ENST00000471551 SHROOM4Q9ULL8 1493 aa23.97■■□□□ 1.43
SLC1A4-202ENST00000471551 EIF4G1Q04637 1599 aaKnown RBP23.95■■□□□ 1.43
SLC1A4-202ENST00000471551 SCRIBQ14160 1630 aa23.81■■□□□ 1.4
SLC1A4-202ENST00000471551 CUX2O14529 1486 aa23.29■■□□□ 1.32
SLC1A4-202ENST00000471551 ERCC6Q03468 1493 aa23.11■■□□□ 1.29
SLC1A4-202ENST00000471551 NCAPD3P42695 1498 aa22.99■■□□□ 1.27
SLC1A4-202ENST00000471551 SUPT5HO00267 1087 aaKnown RBP22.99■■□□□ 1.27
SLC1A4-202ENST00000471551 NESP48681 1621 aa22.92■■□□□ 1.26
SLC1A4-202ENST00000471551 RSF1Q96T23 1441 aaPredicted RBP22.91■■□□□ 1.26
SLC1A4-202ENST00000471551 BAZ1AQ9NRL2 1556 aaPredicted RBP22.9■■□□□ 1.26
SLC1A4-202ENST00000471551 ATAD2BQ9ULI0 1458 aa22.85■■□□□ 1.25
SLC1A4-202ENST00000471551 MROH2BQ7Z745 1585 aa22.83■■□□□ 1.25
SLC1A4-202ENST00000471551 TRIM41Q8WV44 630 aa22.78■■□□□ 1.24
SLC1A4-202ENST00000471551 SMARCA4P51532 1647 aa22.77■■□□□ 1.24
SLC1A4-202ENST00000471551 THOC2Q8NI27 1593 aaKnown RBP22.73■■□□□ 1.23
SLC1A4-202ENST00000471551 HMGXB3Q12766 1538 aa22.7■■□□□ 1.22
SLC1A4-202ENST00000471551 SMARCA2P51531 1590 aa22.65■■□□□ 1.22
SLC1A4-202ENST00000471551 WIZO95785 1651 aa22.59■■□□□ 1.21
SLC1A4-202ENST00000471551 PEG3Q9GZU2 1588 aa22.56■■□□□ 1.2
SLC1A4-202ENST00000471551 BAZ1BQ9UIG0 1483 aaKnown RBP22.54■■□□□ 1.2
SLC1A4-202ENST00000471551 KIF21AQ7Z4S6 1674 aa22.51■■□□□ 1.19
SLC1A4-202ENST00000471551 LAMC3Q9Y6N6 1575 aa22.5■■□□□ 1.19
SLC1A4-202ENST00000471551 TOP2AP11388 1531 aaKnown RBP22.45■■□□□ 1.18
SLC1A4-202ENST00000471551 PDS5BQ9NTI5 1447 aa22.4■■□□□ 1.18
SLC1A4-202ENST00000471551 MRC2Q9UBG0 1479 aa22.28■■□□□ 1.16
SLC1A4-202ENST00000471551 CADPSQ9ULU8 1353 aa22.26■■□□□ 1.15
SLC1A4-202ENST00000471551 WDR62O43379 1518 aa22.26■■□□□ 1.15
SLC1A4-202ENST00000471551 CCDC88BA6NC98 1476 aa22.19■■□□□ 1.14
SLC1A4-202ENST00000471551 OSCARQ8IYS5 282 aa22.16■■□□□ 1.14
SLC1A4-202ENST00000471551 CEP164Q9UPV0 1460 aa22.04■■□□□ 1.12
SLC1A4-202ENST00000471551 FANCD2Q9BXW9 1451 aa22■■□□□ 1.11
SLC1A4-202ENST00000471551 CHIC1Q5VXU3 224 aa21.99■■□□□ 1.11
SLC1A4-202ENST00000471551 RIMBP3CA6NJZ7 1639 aa21.96■■□□□ 1.11
SLC1A4-202ENST00000471551 RIMBP3BA6NNM3 1639 aa21.96■■□□□ 1.11
SLC1A4-202ENST00000471551 RIMBP3Q9UFD9 1639 aa21.96■■□□□ 1.11
SLC1A4-202ENST00000471551 URB2Q14146 1524 aaKnown RBP21.91■■□□□ 1.1
SLC1A4-202ENST00000471551 CFTRP13569 1480 aa21.88■■□□□ 1.09
SLC1A4-202ENST00000471551 ARHGEF11O15085 1522 aa21.82■■□□□ 1.08
SLC1A4-202ENST00000471551 ZNF608Q9ULD9 1512 aaPredicted RBP21.77■■□□□ 1.08
SLC1A4-202ENST00000471551 CYB5RLQ6IPT4 315 aa21.74■■□□□ 1.07
SLC1A4-202ENST00000471551 TRHP20396 242 aaPredicted RBP21.65■■□□□ 1.06
SLC1A4-202ENST00000471551 IFT140Q96RY7 1462 aa21.63■■□□□ 1.05
SLC1A4-202ENST00000471551 ARAP1Q96P48 1450 aa21.6■■□□□ 1.05
SLC1A4-202ENST00000471551 ABCC8Q09428 1581 aa21.6■■□□□ 1.05
SLC1A4-202ENST00000471551 PRDM2Q13029 1718 aa21.6■■□□□ 1.05
SLC1A4-202ENST00000471551 WRNQ14191 1432 aaPredicted RBP eCLIP21.58■■□□□ 1.05
SLC1A4-202ENST00000471551 TOPBP1Q92547 1522 aa21.53■■□□□ 1.04
SLC1A4-202ENST00000471551 EIF4G3O43432 1585 aaKnown RBP21.53■■□□□ 1.04
SLC1A4-202ENST00000471551 AQRO60306 1485 aaKnown RBP eCLIP21.49■■□□□ 1.03
SLC1A4-202ENST00000471551 CHD1O14646 1710 aa21.49■■□□□ 1.03
SLC1A4-202ENST00000471551 AEBP2Q6ZN18 517 aaPredicted RBP21.43■■□□□ 1.02
SLC1A4-202ENST00000471551 SYNJ1O43426 1573 aa21.43■■□□□ 1.02
SLC1A4-202ENST00000471551 FBLN2P98095 1184 aa21.42■■□□□ 1.02
SLC1A4-202ENST00000471551 TOP2BQ02880 1626 aa21.41■■□□□ 1.02
SLC1A4-202ENST00000471551 TARBP1Q13395 1621 aaKnown RBP21.39■■□□□ 1.01
SLC1A4-202ENST00000471551 BIVM-ERCC5R4GMW8 1640 aa21.39■■□□□ 1.01
SLC1A4-202ENST00000471551 CUX1P39880 1505 aa21.35■■□□□ 1.01
SLC1A4-202ENST00000471551 DNMBPQ6XZF7 1577 aa21.35■■□□□ 1.01
SLC1A4-202ENST00000471551 EEA1Q15075 1411 aa21.28■■□□□ 1
SLC1A4-202ENST00000471551 POLA1P09884 1462 aaPredicted RBP21.27■■□□□ 1
SLC1A4-202ENST00000471551 RAD54L2Q9Y4B4 1467 aa21.27■■□□□ 1
SLC1A4-202ENST00000471551 CLASP1Q7Z460 1538 aa21.25■□□□□ 0.99
SLC1A4-202ENST00000471551 TDRD9Q8NDG6 1382 aaKnown RBP21.24■□□□□ 0.99
SLC1A4-202ENST00000471551 SOGA1O94964 1423 aa21.21■□□□□ 0.99
SLC1A4-202ENST00000471551 FAM9AQ8IZU1 332 aaPredicted RBP21.2■□□□□ 0.98
SLC1A4-202ENST00000471551 SNAPC4Q5SXM2 1469 aa21.2■□□□□ 0.98
SLC1A4-202ENST00000471551 FGD5Q6ZNL6 1462 aa21.16■□□□□ 0.98
SLC1A4-202ENST00000471551 CHMP7Q8WUX9 453 aaPredicted RBP21.13■□□□□ 0.97
SLC1A4-202ENST00000471551 CSRNP3Q8WYN3 585 aa21.12■□□□□ 0.97
SLC1A4-202ENST00000471551 RUSC2Q8N2Y8 1516 aa21.1■□□□□ 0.97
SLC1A4-202ENST00000471551 KIF27Q86VH2 1401 aa21.08■□□□□ 0.97
SLC1A4-202ENST00000471551 GAPVD1Q14C86 1478 aa21.07■□□□□ 0.96
SLC1A4-202ENST00000471551 LOC105371045A0A1W2PR82 267 aa21.06■□□□□ 0.96
SLC1A4-202ENST00000471551 MAGI1Q96QZ7 1491 aaPredicted RBP21.05■□□□□ 0.96
SLC1A4-202ENST00000471551 ABCA10Q8WWZ4 1543 aa21.02■□□□□ 0.96
SLC1A4-202ENST00000471551 SYNJ2O15056 1496 aa21.01■□□□□ 0.95
SLC1A4-202ENST00000471551 GRIN2BQ13224 1484 aa21.01■□□□□ 0.95
SLC1A4-202ENST00000471551 WDR97A6NE52 1622 aa20.99■□□□□ 0.95
SLC1A4-202ENST00000471551 ERCC6L2Q5T890 1561 aa20.97■□□□□ 0.95
SLC1A4-202ENST00000471551 KIF21BO75037 1637 aa20.93■□□□□ 0.94
SLC1A4-202ENST00000471551 GOLGA3Q08378 1498 aa20.91■□□□□ 0.94
SLC1A4-202ENST00000471551 PRXQ9BXM0 1461 aa20.88■□□□□ 0.93
SLC1A4-202ENST00000471551 IGF1RP08069 1367 aa20.88■□□□□ 0.93
SLC1A4-202ENST00000471551 PBRM1Q86U86 1689 aa20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 147.5 ms