RNA–Protein interactions for RNA: ENST00000471452.1

BCR-209, Transcript of BCR, RhoGEF and GTPase activating protein, humanhuman

TSL 3

Gene BCR, Length 638 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BCR-209ENST00000471452 NISCHQ9Y2I1 1504 aa31.23■■■□□ 2.59
BCR-209ENST00000471452 ABCC9O60706 1549 aa28.46■■■□□ 2.15
BCR-209ENST00000471452 CCDC180Q9P1Z9 1646 aa28.12■■■□□ 2.09
BCR-209ENST00000471452 DNAJC5BQ9UF47 199 aa26.92■■□□□ 1.9
BCR-209ENST00000471452 RB1CC1Q8TDY2 1594 aa26.9■■□□□ 1.9
BCR-209ENST00000471452 NACADO15069 1562 aa26.63■■□□□ 1.85
BCR-209ENST00000471452 DCAF8L2P0C7V8 631 aa26.54■■□□□ 1.84
BCR-209ENST00000471452 PABPN1Q86U42 306 aaKnown RBP eCLIP26.46■■□□□ 1.83
BCR-209ENST00000471452 UNC13AQ9UPW8 1703 aa26.34■■□□□ 1.81
BCR-209ENST00000471452 BICRAQ9NZM4 1560 aa26.16■■□□□ 1.78
BCR-209ENST00000471452 MYO15BQ96JP2 1530 aa26.14■■□□□ 1.77
BCR-209ENST00000471452 ZCCHC6Q5VYS8 1495 aaKnown RBP25.84■■□□□ 1.73
BCR-209ENST00000471452 DCAF1Q9Y4B6 1507 aa25.72■■□□□ 1.71
BCR-209ENST00000471452 SCRIBQ14160 1630 aa25.7■■□□□ 1.7
BCR-209ENST00000471452 SHROOM4Q9ULL8 1493 aa25.69■■□□□ 1.7
BCR-209ENST00000471452 CC2D2AQ9P2K1 1620 aa25.66■■□□□ 1.7
BCR-209ENST00000471452 CECR2Q9BXF3 1484 aa25.63■■□□□ 1.69
BCR-209ENST00000471452 EIF4G1Q04637 1599 aaKnown RBP25.54■■□□□ 1.68
BCR-209ENST00000471452 DNAJC5Q9H3Z4 198 aa24.85■■□□□ 1.57
BCR-209ENST00000471452 NCAPD3P42695 1498 aa24.59■■□□□ 1.53
BCR-209ENST00000471452 ERCC6Q03468 1493 aa24.58■■□□□ 1.52
BCR-209ENST00000471452 CUX2O14529 1486 aa24.56■■□□□ 1.52
BCR-209ENST00000471452 ATAD2BQ9ULI0 1458 aa24.51■■□□□ 1.51
BCR-209ENST00000471452 SMARCA4P51532 1647 aa24.44■■□□□ 1.5
BCR-209ENST00000471452 SMARCA2P51531 1590 aa24.41■■□□□ 1.5
BCR-209ENST00000471452 HMGXB3Q12766 1538 aa24.4■■□□□ 1.5
BCR-209ENST00000471452 NESP48681 1621 aa24.38■■□□□ 1.49
BCR-209ENST00000471452 BAZ1BQ9UIG0 1483 aaKnown RBP24.28■■□□□ 1.48
BCR-209ENST00000471452 BAZ1AQ9NRL2 1556 aaPredicted RBP24.25■■□□□ 1.47
BCR-209ENST00000471452 THOC2Q8NI27 1593 aaKnown RBP24.16■■□□□ 1.46
BCR-209ENST00000471452 PEG3Q9GZU2 1588 aa24.16■■□□□ 1.46
BCR-209ENST00000471452 MROH2BQ7Z745 1585 aa24.1■■□□□ 1.45
BCR-209ENST00000471452 LAMC3Q9Y6N6 1575 aa24.09■■□□□ 1.45
BCR-209ENST00000471452 KIF21AQ7Z4S6 1674 aa24.05■■□□□ 1.44
BCR-209ENST00000471452 PDS5BQ9NTI5 1447 aa23.95■■□□□ 1.42
BCR-209ENST00000471452 CADPSQ9ULU8 1353 aa23.84■■□□□ 1.41
BCR-209ENST00000471452 WIZO95785 1651 aa23.8■■□□□ 1.4
BCR-209ENST00000471452 MRC2Q9UBG0 1479 aa23.8■■□□□ 1.4
BCR-209ENST00000471452 WDR62O43379 1518 aa23.74■■□□□ 1.39
BCR-209ENST00000471452 TRIM41Q8WV44 630 aa23.74■■□□□ 1.39
BCR-209ENST00000471452 CEP164Q9UPV0 1460 aa23.66■■□□□ 1.38
BCR-209ENST00000471452 FANCD2Q9BXW9 1451 aa23.61■■□□□ 1.37
BCR-209ENST00000471452 CFTRP13569 1480 aa23.52■■□□□ 1.36
BCR-209ENST00000471452 RSF1Q96T23 1441 aaPredicted RBP23.48■■□□□ 1.35
BCR-209ENST00000471452 TOP2AP11388 1531 aaKnown RBP23.45■■□□□ 1.34
BCR-209ENST00000471452 URB2Q14146 1524 aaKnown RBP23.45■■□□□ 1.34
BCR-209ENST00000471452 OSCARQ8IYS5 282 aa23.4■■□□□ 1.34
BCR-209ENST00000471452 PRDM2Q13029 1718 aa23.27■■□□□ 1.32
BCR-209ENST00000471452 ZNF608Q9ULD9 1512 aaPredicted RBP23.22■■□□□ 1.31
BCR-209ENST00000471452 CCDC88BA6NC98 1476 aa23.19■■□□□ 1.3
BCR-209ENST00000471452 RIMBP3CA6NJZ7 1639 aa23.18■■□□□ 1.3
BCR-209ENST00000471452 RIMBP3BA6NNM3 1639 aa23.18■■□□□ 1.3
BCR-209ENST00000471452 RIMBP3Q9UFD9 1639 aa23.18■■□□□ 1.3
BCR-209ENST00000471452 IFT140Q96RY7 1462 aa23.17■■□□□ 1.3
BCR-209ENST00000471452 TOPBP1Q92547 1522 aa23.13■■□□□ 1.29
BCR-209ENST00000471452 EIF4G3O43432 1585 aaKnown RBP23.07■■□□□ 1.28
BCR-209ENST00000471452 ARHGEF11O15085 1522 aa23.07■■□□□ 1.28
BCR-209ENST00000471452 DNMBPQ6XZF7 1577 aa23.01■■□□□ 1.27
BCR-209ENST00000471452 ABCC8Q09428 1581 aa22.99■■□□□ 1.27
BCR-209ENST00000471452 AQRO60306 1485 aaKnown RBP eCLIP22.96■■□□□ 1.27
BCR-209ENST00000471452 CHD1O14646 1710 aa22.95■■□□□ 1.26
BCR-209ENST00000471452 TARBP1Q13395 1621 aaKnown RBP22.94■■□□□ 1.26
BCR-209ENST00000471452 CYB5RLQ6IPT4 315 aa22.92■■□□□ 1.26
BCR-209ENST00000471452 POLA1P09884 1462 aaPredicted RBP22.88■■□□□ 1.25
BCR-209ENST00000471452 FBLN2P98095 1184 aa22.88■■□□□ 1.25
BCR-209ENST00000471452 ARAP1Q96P48 1450 aa22.84■■□□□ 1.25
BCR-209ENST00000471452 RAD54L2Q9Y4B4 1467 aa22.84■■□□□ 1.25
BCR-209ENST00000471452 TDRD9Q8NDG6 1382 aaKnown RBP22.78■■□□□ 1.24
BCR-209ENST00000471452 TRHP20396 242 aaPredicted RBP22.76■■□□□ 1.23
BCR-209ENST00000471452 SOGA1O94964 1423 aa22.75■■□□□ 1.23
BCR-209ENST00000471452 SNAPC4Q5SXM2 1469 aa22.73■■□□□ 1.23
BCR-209ENST00000471452 FGD5Q6ZNL6 1462 aa22.72■■□□□ 1.23
BCR-209ENST00000471452 CUX1P39880 1505 aa22.66■■□□□ 1.22
BCR-209ENST00000471452 CLASP1Q7Z460 1538 aa22.65■■□□□ 1.22
BCR-209ENST00000471452 WDR97A6NE52 1622 aa22.63■■□□□ 1.21
BCR-209ENST00000471452 CHMP7Q8WUX9 453 aaPredicted RBP22.62■■□□□ 1.21
BCR-209ENST00000471452 MAGI1Q96QZ7 1491 aaPredicted RBP22.6■■□□□ 1.21
BCR-209ENST00000471452 SYNJ1O43426 1573 aa22.6■■□□□ 1.21
BCR-209ENST00000471452 GRIN2BQ13224 1484 aa22.59■■□□□ 1.21
BCR-209ENST00000471452 SYNJ2O15056 1496 aa22.54■■□□□ 1.2
BCR-209ENST00000471452 PBRM1Q86U86 1689 aa22.51■■□□□ 1.19
BCR-209ENST00000471452 GAPVD1Q14C86 1478 aa22.48■■□□□ 1.19
BCR-209ENST00000471452 ABCA5Q8WWZ7 1642 aa22.42■■□□□ 1.18
BCR-209ENST00000471452 ABCA10Q8WWZ4 1543 aa22.4■■□□□ 1.18
BCR-209ENST00000471452 ERCC6L2Q5T890 1561 aa22.33■■□□□ 1.17
BCR-209ENST00000471452 GRIN2AQ12879 1464 aa22.31■■□□□ 1.16
BCR-209ENST00000471452 SUPT5HO00267 1087 aaKnown RBP22.3■■□□□ 1.16
BCR-209ENST00000471452 ADAMTS12P58397 1594 aa22.29■■□□□ 1.16
BCR-209ENST00000471452 CEP170Q5SW79 1584 aa22.27■■□□□ 1.16
BCR-209ENST00000471452 AEBP2Q6ZN18 517 aaPredicted RBP22.27■■□□□ 1.16
BCR-209ENST00000471452 WRNQ14191 1432 aaPredicted RBP eCLIP22.26■■□□□ 1.15
BCR-209ENST00000471452 NUP160Q12769 1436 aa22.23■■□□□ 1.15
BCR-209ENST00000471452 BIVM-ERCC5R4GMW8 1640 aa22.2■■□□□ 1.14
BCR-209ENST00000471452 TOP2BQ02880 1626 aa22.19■■□□□ 1.14
BCR-209ENST00000471452 FHAD1B1AJZ9 1412 aa22.17■■□□□ 1.14
BCR-209ENST00000471452 SHROOM2Q13796 1616 aa22.17■■□□□ 1.14
BCR-209ENST00000471452 ERICH3Q5RHP9 1530 aa22.11■■□□□ 1.13
BCR-209ENST00000471452 PRG4Q92954 1404 aaPredicted RBP22.06■■□□□ 1.12
BCR-209ENST00000471452 KIF13AQ9H1H9 1805 aa22.03■■□□□ 1.12
BCR-209ENST00000471452 JPH4Q96JJ6 628 aa21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms