RNA–Protein interactions for RNA: ENST00000471426.1

RBMS3-211, Transcript of RNA binding motif single stranded interacting protein 3, humanhuman

TSL 4

Gene RBMS3, Length 841 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBMS3-211ENST00000471426 NISCHQ9Y2I1 1504 aa31.31■■■□□ 2.6
RBMS3-211ENST00000471426 CCDC180Q9P1Z9 1646 aa28.15■■■□□ 2.1
RBMS3-211ENST00000471426 ABCC9O60706 1549 aa28.02■■■□□ 2.08
RBMS3-211ENST00000471426 RB1CC1Q8TDY2 1594 aa26.7■■□□□ 1.86
RBMS3-211ENST00000471426 NACADO15069 1562 aa26.53■■□□□ 1.84
RBMS3-211ENST00000471426 UNC13AQ9UPW8 1703 aa26.25■■□□□ 1.79
RBMS3-211ENST00000471426 DNAJC5BQ9UF47 199 aa26.22■■□□□ 1.79
RBMS3-211ENST00000471426 MYO15BQ96JP2 1530 aa26.19■■□□□ 1.78
RBMS3-211ENST00000471426 DCAF8L2P0C7V8 631 aa26.19■■□□□ 1.78
RBMS3-211ENST00000471426 PABPN1Q86U42 306 aaKnown RBP eCLIP26.01■■□□□ 1.75
RBMS3-211ENST00000471426 BICRAQ9NZM4 1560 aa26.01■■□□□ 1.75
RBMS3-211ENST00000471426 ZCCHC6Q5VYS8 1495 aaKnown RBP26■■□□□ 1.75
RBMS3-211ENST00000471426 DCAF1Q9Y4B6 1507 aa25.88■■□□□ 1.73
RBMS3-211ENST00000471426 SCRIBQ14160 1630 aa25.63■■□□□ 1.69
RBMS3-211ENST00000471426 SHROOM4Q9ULL8 1493 aa25.6■■□□□ 1.69
RBMS3-211ENST00000471426 CC2D2AQ9P2K1 1620 aa25.36■■□□□ 1.65
RBMS3-211ENST00000471426 EIF4G1Q04637 1599 aaKnown RBP25.32■■□□□ 1.64
RBMS3-211ENST00000471426 CECR2Q9BXF3 1484 aa25.21■■□□□ 1.63
RBMS3-211ENST00000471426 NCAPD3P42695 1498 aa24.47■■□□□ 1.51
RBMS3-211ENST00000471426 SMARCA4P51532 1647 aa24.46■■□□□ 1.51
RBMS3-211ENST00000471426 ATAD2BQ9ULI0 1458 aa24.42■■□□□ 1.5
RBMS3-211ENST00000471426 HMGXB3Q12766 1538 aa24.35■■□□□ 1.49
RBMS3-211ENST00000471426 SMARCA2P51531 1590 aa24.34■■□□□ 1.49
RBMS3-211ENST00000471426 BAZ1AQ9NRL2 1556 aaPredicted RBP24.29■■□□□ 1.48
RBMS3-211ENST00000471426 PEG3Q9GZU2 1588 aa24.23■■□□□ 1.47
RBMS3-211ENST00000471426 BAZ1BQ9UIG0 1483 aaKnown RBP24.16■■□□□ 1.46
RBMS3-211ENST00000471426 MROH2BQ7Z745 1585 aa24.15■■□□□ 1.46
RBMS3-211ENST00000471426 ERCC6Q03468 1493 aa24.13■■□□□ 1.45
RBMS3-211ENST00000471426 CUX2O14529 1486 aa24.13■■□□□ 1.45
RBMS3-211ENST00000471426 NESP48681 1621 aa24.12■■□□□ 1.45
RBMS3-211ENST00000471426 DNAJC5Q9H3Z4 198 aa23.98■■□□□ 1.43
RBMS3-211ENST00000471426 LAMC3Q9Y6N6 1575 aa23.95■■□□□ 1.42
RBMS3-211ENST00000471426 THOC2Q8NI27 1593 aaKnown RBP23.94■■□□□ 1.42
RBMS3-211ENST00000471426 WIZO95785 1651 aa23.89■■□□□ 1.42
RBMS3-211ENST00000471426 KIF21AQ7Z4S6 1674 aa23.88■■□□□ 1.41
RBMS3-211ENST00000471426 PDS5BQ9NTI5 1447 aa23.71■■□□□ 1.39
RBMS3-211ENST00000471426 CADPSQ9ULU8 1353 aa23.69■■□□□ 1.38
RBMS3-211ENST00000471426 RSF1Q96T23 1441 aaPredicted RBP23.62■■□□□ 1.37
RBMS3-211ENST00000471426 MRC2Q9UBG0 1479 aa23.57■■□□□ 1.36
RBMS3-211ENST00000471426 WDR62O43379 1518 aa23.57■■□□□ 1.36
RBMS3-211ENST00000471426 TOP2AP11388 1531 aaKnown RBP23.57■■□□□ 1.36
RBMS3-211ENST00000471426 CEP164Q9UPV0 1460 aa23.49■■□□□ 1.35
RBMS3-211ENST00000471426 CFTRP13569 1480 aa23.48■■□□□ 1.35
RBMS3-211ENST00000471426 FANCD2Q9BXW9 1451 aa23.46■■□□□ 1.35
RBMS3-211ENST00000471426 PRDM2Q13029 1718 aa23.38■■□□□ 1.33
RBMS3-211ENST00000471426 URB2Q14146 1524 aaKnown RBP23.31■■□□□ 1.32
RBMS3-211ENST00000471426 CCDC88BA6NC98 1476 aa23.25■■□□□ 1.31
RBMS3-211ENST00000471426 TOPBP1Q92547 1522 aa23.05■■□□□ 1.28
RBMS3-211ENST00000471426 ZNF608Q9ULD9 1512 aaPredicted RBP23.01■■□□□ 1.27
RBMS3-211ENST00000471426 IFT140Q96RY7 1462 aa23■■□□□ 1.27
RBMS3-211ENST00000471426 DNMBPQ6XZF7 1577 aa22.98■■□□□ 1.27
RBMS3-211ENST00000471426 EIF4G3O43432 1585 aaKnown RBP22.93■■□□□ 1.26
RBMS3-211ENST00000471426 ABCC8Q09428 1581 aa22.93■■□□□ 1.26
RBMS3-211ENST00000471426 TRIM41Q8WV44 630 aa22.91■■□□□ 1.26
RBMS3-211ENST00000471426 OSCARQ8IYS5 282 aa22.9■■□□□ 1.26
RBMS3-211ENST00000471426 TARBP1Q13395 1621 aaKnown RBP22.9■■□□□ 1.26
RBMS3-211ENST00000471426 POLA1P09884 1462 aaPredicted RBP22.82■■□□□ 1.24
RBMS3-211ENST00000471426 RIMBP3CA6NJZ7 1639 aa22.79■■□□□ 1.24
RBMS3-211ENST00000471426 RIMBP3BA6NNM3 1639 aa22.79■■□□□ 1.24
RBMS3-211ENST00000471426 RIMBP3Q9UFD9 1639 aa22.79■■□□□ 1.24
RBMS3-211ENST00000471426 CHD1O14646 1710 aa22.77■■□□□ 1.24
RBMS3-211ENST00000471426 AQRO60306 1485 aaKnown RBP eCLIP22.75■■□□□ 1.23
RBMS3-211ENST00000471426 RAD54L2Q9Y4B4 1467 aa22.72■■□□□ 1.23
RBMS3-211ENST00000471426 ARHGEF11O15085 1522 aa22.69■■□□□ 1.22
RBMS3-211ENST00000471426 CUX1P39880 1505 aa22.69■■□□□ 1.22
RBMS3-211ENST00000471426 FGD5Q6ZNL6 1462 aa22.67■■□□□ 1.22
RBMS3-211ENST00000471426 WDR97A6NE52 1622 aa22.64■■□□□ 1.21
RBMS3-211ENST00000471426 SOGA1O94964 1423 aa22.63■■□□□ 1.21
RBMS3-211ENST00000471426 TDRD9Q8NDG6 1382 aaKnown RBP22.59■■□□□ 1.21
RBMS3-211ENST00000471426 SNAPC4Q5SXM2 1469 aa22.56■■□□□ 1.2
RBMS3-211ENST00000471426 PBRM1Q86U86 1689 aa22.51■■□□□ 1.19
RBMS3-211ENST00000471426 CLASP1Q7Z460 1538 aa22.49■■□□□ 1.19
RBMS3-211ENST00000471426 ARAP1Q96P48 1450 aa22.48■■□□□ 1.19
RBMS3-211ENST00000471426 MAGI1Q96QZ7 1491 aaPredicted RBP22.48■■□□□ 1.19
RBMS3-211ENST00000471426 SUPT5HO00267 1087 aaKnown RBP22.47■■□□□ 1.19
RBMS3-211ENST00000471426 FBLN2P98095 1184 aa22.47■■□□□ 1.19
RBMS3-211ENST00000471426 GRIN2BQ13224 1484 aa22.47■■□□□ 1.19
RBMS3-211ENST00000471426 ABCA5Q8WWZ7 1642 aa22.46■■□□□ 1.19
RBMS3-211ENST00000471426 SYNJ1O43426 1573 aa22.42■■□□□ 1.18
RBMS3-211ENST00000471426 ABCA10Q8WWZ4 1543 aa22.41■■□□□ 1.18
RBMS3-211ENST00000471426 SYNJ2O15056 1496 aa22.41■■□□□ 1.18
RBMS3-211ENST00000471426 GAPVD1Q14C86 1478 aa22.4■■□□□ 1.18
RBMS3-211ENST00000471426 CYB5RLQ6IPT4 315 aa22.38■■□□□ 1.17
RBMS3-211ENST00000471426 BIVM-ERCC5R4GMW8 1640 aa22.38■■□□□ 1.17
RBMS3-211ENST00000471426 TOP2BQ02880 1626 aa22.34■■□□□ 1.17
RBMS3-211ENST00000471426 CHMP7Q8WUX9 453 aaPredicted RBP22.32■■□□□ 1.16
RBMS3-211ENST00000471426 ADAMTS12P58397 1594 aa22.27■■□□□ 1.16
RBMS3-211ENST00000471426 WRNQ14191 1432 aaPredicted RBP eCLIP22.26■■□□□ 1.15
RBMS3-211ENST00000471426 GRIN2AQ12879 1464 aa22.22■■□□□ 1.15
RBMS3-211ENST00000471426 CEP170Q5SW79 1584 aa22.19■■□□□ 1.14
RBMS3-211ENST00000471426 ERCC6L2Q5T890 1561 aa22.15■■□□□ 1.14
RBMS3-211ENST00000471426 NUP160Q12769 1436 aa22.14■■□□□ 1.14
RBMS3-211ENST00000471426 ERICH3Q5RHP9 1530 aa22.13■■□□□ 1.13
RBMS3-211ENST00000471426 SHROOM2Q13796 1616 aa22.1■■□□□ 1.13
RBMS3-211ENST00000471426 FHAD1B1AJZ9 1412 aa22.1■■□□□ 1.13
RBMS3-211ENST00000471426 TRHP20396 242 aaPredicted RBP22.07■■□□□ 1.12
RBMS3-211ENST00000471426 RUSC2Q8N2Y8 1516 aa21.97■■□□□ 1.11
RBMS3-211ENST00000471426 PRG4Q92954 1404 aaPredicted RBP21.87■■□□□ 1.09
RBMS3-211ENST00000471426 CUL7Q14999 1698 aa21.85■■□□□ 1.09
RBMS3-211ENST00000471426 AEBP2Q6ZN18 517 aaPredicted RBP21.81■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms