RNA–Protein interactions for RNA: ENST00000471396.1

TRIM59-204, Transcript of tripartite motif containing 59, humanhuman

TSL 4

Gene TRIM59, Length 548 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-204ENST00000471396 AEBP2Q6ZN18 517 aaPredicted RBP19.62■□□□□ 0.73
TRIM59-204ENST00000471396 CHIC1Q5VXU3 224 aa18.8■□□□□ 0.6
TRIM59-204ENST00000471396 NISCHQ9Y2I1 1504 aa18.71■□□□□ 0.59
TRIM59-204ENST00000471396 CCDC180Q9P1Z9 1646 aa16.67■□□□□ 0.26
TRIM59-204ENST00000471396 PHF23Q9BUL5 403 aaPredicted RBP16.58■□□□□ 0.24
TRIM59-204ENST00000471396 SENP3Q9H4L4 574 aaPredicted RBP16.56■□□□□ 0.24
TRIM59-204ENST00000471396 ABCC9O60706 1549 aa16.3■□□□□ 0.2
TRIM59-204ENST00000471396 RB1CC1Q8TDY2 1594 aa15.69■□□□□ 0.1
TRIM59-204ENST00000471396 NACADO15069 1562 aa15.67■□□□□ 0.1
TRIM59-204ENST00000471396 ZCCHC6Q5VYS8 1495 aaKnown RBP15.6■□□□□ 0.09
TRIM59-204ENST00000471396 MYO15BQ96JP2 1530 aa15.58■□□□□ 0.09
TRIM59-204ENST00000471396 DCAF8L2P0C7V8 631 aa15.56■□□□□ 0.08
TRIM59-204ENST00000471396 DCAF1Q9Y4B6 1507 aa15.5■□□□□ 0.07
TRIM59-204ENST00000471396 FOXD1Q16676 465 aa15.47■□□□□ 0.07
TRIM59-204ENST00000471396 UNC13AQ9UPW8 1703 aa15.33■□□□□ 0.04
TRIM59-204ENST00000471396 PLPPR3Q6T4P5 718 aa15.32■□□□□ 0.04
TRIM59-204ENST00000471396 BICRAQ9NZM4 1560 aa15.2■□□□□ 0.02
TRIM59-204ENST00000471396 SCRIBQ14160 1630 aa15.19■□□□□ 0.02
TRIM59-204ENST00000471396 PABPN1Q86U42 306 aaKnown RBP eCLIP15.19■□□□□ 0.02
TRIM59-204ENST00000471396 SHROOM4Q9ULL8 1493 aa15.08■□□□□ 0.01
TRIM59-204ENST00000471396 DNAJC5BQ9UF47 199 aa14.93□□□□□ -0.02
TRIM59-204ENST00000471396 EIF4G1Q04637 1599 aaKnown RBP14.81□□□□□ -0.04
TRIM59-204ENST00000471396 CC2D2AQ9P2K1 1620 aa14.75□□□□□ -0.05
TRIM59-204ENST00000471396 PPP6R1Q9UPN7 881 aa14.7□□□□□ -0.06
TRIM59-204ENST00000471396 CECR2Q9BXF3 1484 aa14.66□□□□□ -0.06
TRIM59-204ENST00000471396 ADRA2BP18089 450 aa14.59□□□□□ -0.07
TRIM59-204ENST00000471396 SMARCA4P51532 1647 aa14.53□□□□□ -0.08
TRIM59-204ENST00000471396 BAZ1AQ9NRL2 1556 aaPredicted RBP14.51□□□□□ -0.09
TRIM59-204ENST00000471396 ATAD2BQ9ULI0 1458 aa14.45□□□□□ -0.1
TRIM59-204ENST00000471396 SMARCA2P51531 1590 aa14.45□□□□□ -0.1
TRIM59-204ENST00000471396 NCAPD3P42695 1498 aa14.44□□□□□ -0.1
TRIM59-204ENST00000471396 PIAS4Q8N2W9 510 aaPredicted RBP14.43□□□□□ -0.1
TRIM59-204ENST00000471396 MROH2BQ7Z745 1585 aa14.41□□□□□ -0.1
TRIM59-204ENST00000471396 PEG3Q9GZU2 1588 aa14.41□□□□□ -0.1
TRIM59-204ENST00000471396 HMGXB3Q12766 1538 aa14.4□□□□□ -0.1
TRIM59-204ENST00000471396 BAZ1BQ9UIG0 1483 aaKnown RBP14.33□□□□□ -0.12
TRIM59-204ENST00000471396 MSH5O43196 834 aa14.3□□□□□ -0.12
TRIM59-204ENST00000471396 WIZO95785 1651 aa14.25□□□□□ -0.13
TRIM59-204ENST00000471396 RSF1Q96T23 1441 aaPredicted RBP14.23□□□□□ -0.13
TRIM59-204ENST00000471396 TOP2AP11388 1531 aaKnown RBP14.13□□□□□ -0.15
TRIM59-204ENST00000471396 NESP48681 1621 aa14.09□□□□□ -0.15
TRIM59-204ENST00000471396 LAMC3Q9Y6N6 1575 aa14.08□□□□□ -0.16
TRIM59-204ENST00000471396 ERCC6Q03468 1493 aa14.06□□□□□ -0.16
TRIM59-204ENST00000471396 CADPSQ9ULU8 1353 aa14.01□□□□□ -0.17
TRIM59-204ENST00000471396 PDS5BQ9NTI5 1447 aa13.97□□□□□ -0.17
TRIM59-204ENST00000471396 KIF21AQ7Z4S6 1674 aa13.95□□□□□ -0.18
TRIM59-204ENST00000471396 CUX2O14529 1486 aa13.93□□□□□ -0.18
TRIM59-204ENST00000471396 CFTRP13569 1480 aa13.93□□□□□ -0.18
TRIM59-204ENST00000471396 CCDC88BA6NC98 1476 aa13.93□□□□□ -0.18
TRIM59-204ENST00000471396 THOC2Q8NI27 1593 aaKnown RBP13.92□□□□□ -0.18
TRIM59-204ENST00000471396 FANCD2Q9BXW9 1451 aa13.87□□□□□ -0.19
TRIM59-204ENST00000471396 PRDM2Q13029 1718 aa13.86□□□□□ -0.19
TRIM59-204ENST00000471396 CEP164Q9UPV0 1460 aa13.86□□□□□ -0.19
TRIM59-204ENST00000471396 MRC2Q9UBG0 1479 aa13.85□□□□□ -0.19
TRIM59-204ENST00000471396 WDR62O43379 1518 aa13.81□□□□□ -0.2
TRIM59-204ENST00000471396 SUPT5HO00267 1087 aaKnown RBP13.81□□□□□ -0.2
TRIM59-204ENST00000471396 URB2Q14146 1524 aaKnown RBP13.73□□□□□ -0.21
TRIM59-204ENST00000471396 TOPBP1Q92547 1522 aa13.64□□□□□ -0.23
TRIM59-204ENST00000471396 ABCC8Q09428 1581 aa13.64□□□□□ -0.23
TRIM59-204ENST00000471396 DNMBPQ6XZF7 1577 aa13.63□□□□□ -0.23
TRIM59-204ENST00000471396 POTEDQ86YR6 584 aa13.62□□□□□ -0.23
TRIM59-204ENST00000471396 IFT140Q96RY7 1462 aa13.57□□□□□ -0.24
TRIM59-204ENST00000471396 PPP4R3CPQ6ZMV5 832 aa13.55□□□□□ -0.24
TRIM59-204ENST00000471396 POLA1P09884 1462 aaPredicted RBP13.53□□□□□ -0.24
TRIM59-204ENST00000471396 CUX1P39880 1505 aa13.53□□□□□ -0.24
TRIM59-204ENST00000471396 KCNA4P22459 653 aa13.51□□□□□ -0.25
TRIM59-204ENST00000471396 TARBP1Q13395 1621 aaKnown RBP13.5□□□□□ -0.25
TRIM59-204ENST00000471396 ZNF608Q9ULD9 1512 aaPredicted RBP13.49□□□□□ -0.25
TRIM59-204ENST00000471396 FGD5Q6ZNL6 1462 aa13.49□□□□□ -0.25
TRIM59-204ENST00000471396 DNAJC5Q9H3Z4 198 aa13.48□□□□□ -0.25
TRIM59-204ENST00000471396 EIF4G3O43432 1585 aaKnown RBP13.46□□□□□ -0.25
TRIM59-204ENST00000471396 RAD54L2Q9Y4B4 1467 aa13.45□□□□□ -0.26
TRIM59-204ENST00000471396 SOGA1O94964 1423 aa13.45□□□□□ -0.26
TRIM59-204ENST00000471396 WRNQ14191 1432 aaPredicted RBP eCLIP13.43□□□□□ -0.26
TRIM59-204ENST00000471396 WDR97A6NE52 1622 aa13.42□□□□□ -0.26
TRIM59-204ENST00000471396 BIVM-ERCC5R4GMW8 1640 aa13.42□□□□□ -0.26
TRIM59-204ENST00000471396 TOP2BQ02880 1626 aa13.41□□□□□ -0.26
TRIM59-204ENST00000471396 SYNJ1O43426 1573 aa13.41□□□□□ -0.26
TRIM59-204ENST00000471396 AQRO60306 1485 aaKnown RBP eCLIP13.4□□□□□ -0.268e-7■■■■■ 28.7
TRIM59-204ENST00000471396 TDRD9Q8NDG6 1382 aaKnown RBP13.36□□□□□ -0.27
TRIM59-204ENST00000471396 ABCA10Q8WWZ4 1543 aa13.36□□□□□ -0.27
TRIM59-204ENST00000471396 MAPK8IP2Q13387 824 aaPredicted RBP13.35□□□□□ -0.27
TRIM59-204ENST00000471396 ABCA5Q8WWZ7 1642 aa13.33□□□□□ -0.28
TRIM59-204ENST00000471396 GRIN2BQ13224 1484 aa13.31□□□□□ -0.28
TRIM59-204ENST00000471396 GAPVD1Q14C86 1478 aa13.3□□□□□ -0.28
TRIM59-204ENST00000471396 SNAPC4Q5SXM2 1469 aa13.3□□□□□ -0.28
TRIM59-204ENST00000471396 PBRM1Q86U86 1689 aa13.3□□□□□ -0.28
TRIM59-204ENST00000471396 MAGI1Q96QZ7 1491 aaPredicted RBP13.29□□□□□ -0.28
TRIM59-204ENST00000471396 OSCARQ8IYS5 282 aa13.29□□□□□ -0.28
TRIM59-204ENST00000471396 CHD1O14646 1710 aa13.29□□□□□ -0.28
TRIM59-204ENST00000471396 SCAF1Q9H7N4 1312 aaKnown RBP13.24□□□□□ -0.29
TRIM59-204ENST00000471396 NCBP3Q53F19 620 aaKnown RBP13.24□□□□□ -0.29
TRIM59-204ENST00000471396 SYNJ2O15056 1496 aa13.23□□□□□ -0.29
TRIM59-204ENST00000471396 DMRT2Q9Y5R5 561 aa13.23□□□□□ -0.29
TRIM59-204ENST00000471396 ADAMTS12P58397 1594 aa13.21□□□□□ -0.29
TRIM59-204ENST00000471396 FBLN2P98095 1184 aa13.21□□□□□ -0.29
TRIM59-204ENST00000471396 ERICH3Q5RHP9 1530 aa13.2□□□□□ -0.3
TRIM59-204ENST00000471396 CHMP7Q8WUX9 453 aaPredicted RBP13.18□□□□□ -0.3
TRIM59-204ENST00000471396 FHAD1B1AJZ9 1412 aa13.16□□□□□ -0.3
TRIM59-204ENST00000471396 CLASP1Q7Z460 1538 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms