RNA–Protein interactions for RNA: ENST00000471375.5

HDAC10-209, Transcript of histone deacetylase 10, humanhuman

TSL 5

Gene HDAC10, Length 928 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC10-209ENST00000471375 NISCHQ9Y2I1 1504 aa47.41■■■■■ 5.18
HDAC10-209ENST00000471375 CCDC180Q9P1Z9 1646 aa42.26■■■■■ 4.36
HDAC10-209ENST00000471375 ABCC9O60706 1549 aa41.28■■■■■ 4.2
HDAC10-209ENST00000471375 RB1CC1Q8TDY2 1594 aa39.76■■■■□ 3.96
HDAC10-209ENST00000471375 NACADO15069 1562 aa39.72■■■■□ 3.95
HDAC10-209ENST00000471375 MYO15BQ96JP2 1530 aa39.51■■■■□ 3.92
HDAC10-209ENST00000471375 ZCCHC6Q5VYS8 1495 aaKnown RBP39.51■■■■□ 3.92
HDAC10-209ENST00000471375 DCAF8L2P0C7V8 631 aa39.45■■■■□ 3.91
HDAC10-209ENST00000471375 DCAF1Q9Y4B6 1507 aa39.3■■■■□ 3.88
HDAC10-209ENST00000471375 UNC13AQ9UPW8 1703 aa38.86■■■■□ 3.81
HDAC10-209ENST00000471375 BICRAQ9NZM4 1560 aa38.56■■■■□ 3.76
HDAC10-209ENST00000471375 PABPN1Q86U42 306 aaKnown RBP eCLIP38.5■■■■□ 3.75
HDAC10-209ENST00000471375 SCRIBQ14160 1630 aa38.45■■■■□ 3.75
HDAC10-209ENST00000471375 SHROOM4Q9ULL8 1493 aa38.24■■■■□ 3.71
HDAC10-209ENST00000471375 DNAJC5BQ9UF47 199 aa37.9■■■■□ 3.66
HDAC10-209ENST00000471375 EIF4G1Q04637 1599 aaKnown RBP37.55■■■■□ 3.6
HDAC10-209ENST00000471375 CC2D2AQ9P2K1 1620 aa37.39■■■■□ 3.58
HDAC10-209ENST00000471375 CECR2Q9BXF3 1484 aa37.13■■■■□ 3.54
HDAC10-209ENST00000471375 SMARCA4P51532 1647 aa36.83■■■■□ 3.49
HDAC10-209ENST00000471375 BAZ1AQ9NRL2 1556 aaPredicted RBP36.78■■■■□ 3.48
HDAC10-209ENST00000471375 NCAPD3P42695 1498 aa36.62■■■■□ 3.45
HDAC10-209ENST00000471375 ATAD2BQ9ULI0 1458 aa36.62■■■■□ 3.45
HDAC10-209ENST00000471375 SMARCA2P51531 1590 aa36.61■■■■□ 3.45
HDAC10-209ENST00000471375 PEG3Q9GZU2 1588 aa36.52■■■■□ 3.44
HDAC10-209ENST00000471375 MROH2BQ7Z745 1585 aa36.51■■■■□ 3.44
HDAC10-209ENST00000471375 HMGXB3Q12766 1538 aa36.49■■■■□ 3.43
HDAC10-209ENST00000471375 BAZ1BQ9UIG0 1483 aaKnown RBP36.31■■■■□ 3.4
HDAC10-209ENST00000471375 WIZO95785 1651 aa36.11■■■■□ 3.37
HDAC10-209ENST00000471375 RSF1Q96T23 1441 aaPredicted RBP36.07■■■■□ 3.36
HDAC10-209ENST00000471375 TOP2AP11388 1531 aaKnown RBP35.78■■■■□ 3.32
HDAC10-209ENST00000471375 NESP48681 1621 aa35.71■■■■□ 3.31
HDAC10-209ENST00000471375 LAMC3Q9Y6N6 1575 aa35.7■■■■□ 3.31
HDAC10-209ENST00000471375 ERCC6Q03468 1493 aa35.6■■■■□ 3.29
HDAC10-209ENST00000471375 CADPSQ9ULU8 1353 aa35.52■■■■□ 3.28
HDAC10-209ENST00000471375 PDS5BQ9NTI5 1447 aa35.41■■■■□ 3.26
HDAC10-209ENST00000471375 KIF21AQ7Z4S6 1674 aa35.33■■■■□ 3.25
HDAC10-209ENST00000471375 CUX2O14529 1486 aa35.33■■■■□ 3.25
HDAC10-209ENST00000471375 CFTRP13569 1480 aa35.33■■■■□ 3.25
HDAC10-209ENST00000471375 CCDC88BA6NC98 1476 aa35.3■■■■□ 3.24
HDAC10-209ENST00000471375 THOC2Q8NI27 1593 aaKnown RBP35.28■■■■□ 3.24
HDAC10-209ENST00000471375 FANCD2Q9BXW9 1451 aa35.12■■■■□ 3.21
HDAC10-209ENST00000471375 PRDM2Q13029 1718 aa35.11■■■■□ 3.21
HDAC10-209ENST00000471375 CEP164Q9UPV0 1460 aa35.1■■■■□ 3.21
HDAC10-209ENST00000471375 MRC2Q9UBG0 1479 aa35.08■■■■□ 3.21
HDAC10-209ENST00000471375 WDR62O43379 1518 aa34.99■■■■□ 3.19
HDAC10-209ENST00000471375 SUPT5HO00267 1087 aaKnown RBP34.96■■■■□ 3.19
HDAC10-209ENST00000471375 URB2Q14146 1524 aaKnown RBP34.78■■■■□ 3.16
HDAC10-209ENST00000471375 ABCC8Q09428 1581 aa34.58■■■■□ 3.13
HDAC10-209ENST00000471375 TOPBP1Q92547 1522 aa34.56■■■■□ 3.12
HDAC10-209ENST00000471375 DNMBPQ6XZF7 1577 aa34.54■■■■□ 3.12
HDAC10-209ENST00000471375 IFT140Q96RY7 1462 aa34.38■■■■□ 3.09
HDAC10-209ENST00000471375 CUX1P39880 1505 aa34.27■■■■□ 3.08
HDAC10-209ENST00000471375 POLA1P09884 1462 aaPredicted RBP34.27■■■■□ 3.08
HDAC10-209ENST00000471375 DNAJC5Q9H3Z4 198 aa34.23■■■■□ 3.07
HDAC10-209ENST00000471375 TARBP1Q13395 1621 aaKnown RBP34.22■■■■□ 3.07
HDAC10-209ENST00000471375 ZNF608Q9ULD9 1512 aaPredicted RBP34.18■■■■□ 3.06
HDAC10-209ENST00000471375 FGD5Q6ZNL6 1462 aa34.16■■■■□ 3.06
HDAC10-209ENST00000471375 EIF4G3O43432 1585 aaKnown RBP34.11■■■■□ 3.05
HDAC10-209ENST00000471375 SOGA1O94964 1423 aa34.08■■■■□ 3.05
HDAC10-209ENST00000471375 RAD54L2Q9Y4B4 1467 aa34.07■■■■□ 3.04
HDAC10-209ENST00000471375 WRNQ14191 1432 aaPredicted RBP eCLIP34.02■■■■□ 3.04
HDAC10-209ENST00000471375 WDR97A6NE52 1622 aa34.01■■■■□ 3.03
HDAC10-209ENST00000471375 BIVM-ERCC5R4GMW8 1640 aa34.01■■■■□ 3.03
HDAC10-209ENST00000471375 TOP2BQ02880 1626 aa33.99■■■■□ 3.03
HDAC10-209ENST00000471375 AQRO60306 1485 aaKnown RBP eCLIP33.96■■■■□ 3.035e-7■■■□□ 15
HDAC10-209ENST00000471375 SYNJ1O43426 1573 aa33.95■■■■□ 3.03
HDAC10-209ENST00000471375 TDRD9Q8NDG6 1382 aaKnown RBP33.87■■■■□ 3.01
HDAC10-209ENST00000471375 ABCA10Q8WWZ4 1543 aa33.86■■■■□ 3.01
HDAC10-209ENST00000471375 ABCA5Q8WWZ7 1642 aa33.75■■■□□ 2.99
HDAC10-209ENST00000471375 OSCARQ8IYS5 282 aa33.74■■■□□ 2.99
HDAC10-209ENST00000471375 GRIN2BQ13224 1484 aa33.74■■■□□ 2.99
HDAC10-209ENST00000471375 GAPVD1Q14C86 1478 aa33.72■■■□□ 2.99
HDAC10-209ENST00000471375 SNAPC4Q5SXM2 1469 aa33.69■■■□□ 2.98
HDAC10-209ENST00000471375 PBRM1Q86U86 1689 aa33.68■■■□□ 2.98
HDAC10-209ENST00000471375 MAGI1Q96QZ7 1491 aaPredicted RBP33.68■■■□□ 2.98
HDAC10-209ENST00000471375 CHD1O14646 1710 aa33.67■■■□□ 2.98
HDAC10-209ENST00000471375 SYNJ2O15056 1496 aa33.53■■■□□ 2.96
HDAC10-209ENST00000471375 FBLN2P98095 1184 aa33.49■■■□□ 2.95
HDAC10-209ENST00000471375 ERICH3Q5RHP9 1530 aa33.47■■■□□ 2.95
HDAC10-209ENST00000471375 ADAMTS12P58397 1594 aa33.43■■■□□ 2.94
HDAC10-209ENST00000471375 CHMP7Q8WUX9 453 aaPredicted RBP33.43■■■□□ 2.94
HDAC10-209ENST00000471375 FHAD1B1AJZ9 1412 aa33.34■■■□□ 2.93
HDAC10-209ENST00000471375 CLASP1Q7Z460 1538 aa33.33■■■□□ 2.93
HDAC10-209ENST00000471375 GRIN2AQ12879 1464 aa33.31■■■□□ 2.92
HDAC10-209ENST00000471375 KIF27Q86VH2 1401 aa33.31■■■□□ 2.92
HDAC10-209ENST00000471375 RIMBP3CA6NJZ7 1639 aa33.28■■■□□ 2.92
HDAC10-209ENST00000471375 RIMBP3BA6NNM3 1639 aa33.28■■■□□ 2.92
HDAC10-209ENST00000471375 RIMBP3Q9UFD9 1639 aa33.28■■■□□ 2.92
HDAC10-209ENST00000471375 ARHGEF11O15085 1522 aa33.28■■■□□ 2.92
HDAC10-209ENST00000471375 NUP160Q12769 1436 aa33.18■■■□□ 2.9
HDAC10-209ENST00000471375 IGF1RP08069 1367 aa33.16■■■□□ 2.9
HDAC10-209ENST00000471375 CUL7Q14999 1698 aa33.16■■■□□ 2.9
HDAC10-209ENST00000471375 CEP170Q5SW79 1584 aa33.14■■■□□ 2.9
HDAC10-209ENST00000471375 TRIM41Q8WV44 630 aa33.07■■■□□ 2.88
HDAC10-209ENST00000471375 ARAP1Q96P48 1450 aa32.99■■■□□ 2.87
HDAC10-209ENST00000471375 CARMIL1Q5VZK9 1371 aa32.96■■■□□ 2.87
HDAC10-209ENST00000471375 SHROOM2Q13796 1616 aa32.96■■■□□ 2.87
HDAC10-209ENST00000471375 RUSC2Q8N2Y8 1516 aa32.94■■■□□ 2.86
HDAC10-209ENST00000471375 CYB5RLQ6IPT4 315 aa32.85■■■□□ 2.85
HDAC10-209ENST00000471375 KIAA0586Q9BVV6 1533 aa32.82■■■□□ 2.85
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms