RNA–Protein interactions for RNA: ENST00000471364.1

RUBCN-208, Transcript of RUN and cysteine rich domain containing beclin 1 interacting protein, humanhuman

TSL 3

Gene RUBCN, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUBCN-208ENST00000471364 NISCHQ9Y2I1 1504 aa30.93■■■□□ 2.54
RUBCN-208ENST00000471364 ABCC9O60706 1549 aa28.04■■■□□ 2.08
RUBCN-208ENST00000471364 CCDC180Q9P1Z9 1646 aa27.92■■■□□ 2.06
RUBCN-208ENST00000471364 RB1CC1Q8TDY2 1594 aa26.66■■□□□ 1.86
RUBCN-208ENST00000471364 DNAJC5BQ9UF47 199 aa26.44■■□□□ 1.82
RUBCN-208ENST00000471364 NACADO15069 1562 aa26.41■■□□□ 1.82
RUBCN-208ENST00000471364 DCAF8L2P0C7V8 631 aa26.19■■□□□ 1.78
RUBCN-208ENST00000471364 UNC13AQ9UPW8 1703 aa26.11■■□□□ 1.77
RUBCN-208ENST00000471364 PABPN1Q86U42 306 aaKnown RBP eCLIP26.04■■□□□ 1.76
RUBCN-208ENST00000471364 MYO15BQ96JP2 1530 aa25.97■■□□□ 1.75
RUBCN-208ENST00000471364 BICRAQ9NZM4 1560 aa25.84■■□□□ 1.73
RUBCN-208ENST00000471364 ZCCHC6Q5VYS8 1495 aaKnown RBP25.58■■□□□ 1.69
RUBCN-208ENST00000471364 DCAF1Q9Y4B6 1507 aa25.55■■□□□ 1.68
RUBCN-208ENST00000471364 SHROOM4Q9ULL8 1493 aa25.51■■□□□ 1.67
RUBCN-208ENST00000471364 SCRIBQ14160 1630 aa25.37■■□□□ 1.65
RUBCN-208ENST00000471364 CC2D2AQ9P2K1 1620 aa25.36■■□□□ 1.65
RUBCN-208ENST00000471364 CECR2Q9BXF3 1484 aa25.29■■□□□ 1.64
RUBCN-208ENST00000471364 EIF4G1Q04637 1599 aaKnown RBP25.24■■□□□ 1.63
RUBCN-208ENST00000471364 DNAJC5Q9H3Z4 198 aa24.48■■□□□ 1.51
RUBCN-208ENST00000471364 NCAPD3P42695 1498 aa24.35■■□□□ 1.49
RUBCN-208ENST00000471364 CUX2O14529 1486 aa24.29■■□□□ 1.48
RUBCN-208ENST00000471364 ERCC6Q03468 1493 aa24.26■■□□□ 1.47
RUBCN-208ENST00000471364 ATAD2BQ9ULI0 1458 aa24.24■■□□□ 1.47
RUBCN-208ENST00000471364 SMARCA2P51531 1590 aa24.2■■□□□ 1.47
RUBCN-208ENST00000471364 SMARCA4P51532 1647 aa24.2■■□□□ 1.46
RUBCN-208ENST00000471364 HMGXB3Q12766 1538 aa24.18■■□□□ 1.46
RUBCN-208ENST00000471364 BAZ1AQ9NRL2 1556 aaPredicted RBP24.05■■□□□ 1.44
RUBCN-208ENST00000471364 BAZ1BQ9UIG0 1483 aaKnown RBP24.02■■□□□ 1.44
RUBCN-208ENST00000471364 NESP48681 1621 aa24.02■■□□□ 1.44
RUBCN-208ENST00000471364 PEG3Q9GZU2 1588 aa23.96■■□□□ 1.43
RUBCN-208ENST00000471364 LAMC3Q9Y6N6 1575 aa23.88■■□□□ 1.41
RUBCN-208ENST00000471364 THOC2Q8NI27 1593 aaKnown RBP23.86■■□□□ 1.41
RUBCN-208ENST00000471364 MROH2BQ7Z745 1585 aa23.81■■□□□ 1.4
RUBCN-208ENST00000471364 KIF21AQ7Z4S6 1674 aa23.79■■□□□ 1.4
RUBCN-208ENST00000471364 PDS5BQ9NTI5 1447 aa23.73■■□□□ 1.39
RUBCN-208ENST00000471364 CADPSQ9ULU8 1353 aa23.6■■□□□ 1.37
RUBCN-208ENST00000471364 WIZO95785 1651 aa23.56■■□□□ 1.36
RUBCN-208ENST00000471364 MRC2Q9UBG0 1479 aa23.53■■□□□ 1.36
RUBCN-208ENST00000471364 WDR62O43379 1518 aa23.48■■□□□ 1.35
RUBCN-208ENST00000471364 CEP164Q9UPV0 1460 aa23.4■■□□□ 1.34
RUBCN-208ENST00000471364 FANCD2Q9BXW9 1451 aa23.34■■□□□ 1.33
RUBCN-208ENST00000471364 TRIM41Q8WV44 630 aa23.33■■□□□ 1.33
RUBCN-208ENST00000471364 CFTRP13569 1480 aa23.29■■□□□ 1.32
RUBCN-208ENST00000471364 TOP2AP11388 1531 aaKnown RBP23.23■■□□□ 1.31
RUBCN-208ENST00000471364 RSF1Q96T23 1441 aaPredicted RBP23.23■■□□□ 1.31
RUBCN-208ENST00000471364 PRDM2Q13029 1718 aa23.17■■□□□ 1.3
RUBCN-208ENST00000471364 URB2Q14146 1524 aaKnown RBP23.15■■□□□ 1.3
RUBCN-208ENST00000471364 OSCARQ8IYS5 282 aa23.14■■□□□ 1.29
RUBCN-208ENST00000471364 CCDC88BA6NC98 1476 aa22.95■■□□□ 1.26
RUBCN-208ENST00000471364 IFT140Q96RY7 1462 aa22.93■■□□□ 1.26
RUBCN-208ENST00000471364 ZNF608Q9ULD9 1512 aaPredicted RBP22.88■■□□□ 1.25
RUBCN-208ENST00000471364 RIMBP3CA6NJZ7 1639 aa22.88■■□□□ 1.25
RUBCN-208ENST00000471364 RIMBP3BA6NNM3 1639 aa22.88■■□□□ 1.25
RUBCN-208ENST00000471364 RIMBP3Q9UFD9 1639 aa22.88■■□□□ 1.25
RUBCN-208ENST00000471364 TOPBP1Q92547 1522 aa22.87■■□□□ 1.25
RUBCN-208ENST00000471364 ABCC8Q09428 1581 aa22.85■■□□□ 1.25
RUBCN-208ENST00000471364 EIF4G3O43432 1585 aaKnown RBP22.8■■□□□ 1.24
RUBCN-208ENST00000471364 DNMBPQ6XZF7 1577 aa22.79■■□□□ 1.24
RUBCN-208ENST00000471364 ARHGEF11O15085 1522 aa22.76■■□□□ 1.23
RUBCN-208ENST00000471364 CHD1O14646 1710 aa22.71■■□□□ 1.23
RUBCN-208ENST00000471364 TARBP1Q13395 1621 aaKnown RBP22.71■■□□□ 1.23
RUBCN-208ENST00000471364 AQRO60306 1485 aaKnown RBP eCLIP22.66■■□□□ 1.22
RUBCN-208ENST00000471364 POLA1P09884 1462 aaPredicted RBP22.62■■□□□ 1.21
RUBCN-208ENST00000471364 CYB5RLQ6IPT4 315 aa22.59■■□□□ 1.21
RUBCN-208ENST00000471364 FBLN2P98095 1184 aa22.57■■□□□ 1.2
RUBCN-208ENST00000471364 RAD54L2Q9Y4B4 1467 aa22.53■■□□□ 1.2
RUBCN-208ENST00000471364 SOGA1O94964 1423 aa22.52■■□□□ 1.2
RUBCN-208ENST00000471364 ARAP1Q96P48 1450 aa22.51■■□□□ 1.19
RUBCN-208ENST00000471364 WDR97A6NE52 1622 aa22.5■■□□□ 1.19
RUBCN-208ENST00000471364 TDRD9Q8NDG6 1382 aaKnown RBP22.48■■□□□ 1.19
RUBCN-208ENST00000471364 FGD5Q6ZNL6 1462 aa22.45■■□□□ 1.18
RUBCN-208ENST00000471364 TRHP20396 242 aaPredicted RBP22.44■■□□□ 1.18
RUBCN-208ENST00000471364 SNAPC4Q5SXM2 1469 aa22.43■■□□□ 1.18
RUBCN-208ENST00000471364 SYNJ1O43426 1573 aa22.39■■□□□ 1.18
RUBCN-208ENST00000471364 CUX1P39880 1505 aa22.39■■□□□ 1.17
RUBCN-208ENST00000471364 MAGI1Q96QZ7 1491 aaPredicted RBP22.39■■□□□ 1.17
RUBCN-208ENST00000471364 CLASP1Q7Z460 1538 aa22.38■■□□□ 1.17
RUBCN-208ENST00000471364 CHMP7Q8WUX9 453 aaPredicted RBP22.38■■□□□ 1.17
RUBCN-208ENST00000471364 GRIN2BQ13224 1484 aa22.35■■□□□ 1.17
RUBCN-208ENST00000471364 PBRM1Q86U86 1689 aa22.32■■□□□ 1.16
RUBCN-208ENST00000471364 SYNJ2O15056 1496 aa22.31■■□□□ 1.16
RUBCN-208ENST00000471364 GAPVD1Q14C86 1478 aa22.25■■□□□ 1.15
RUBCN-208ENST00000471364 SUPT5HO00267 1087 aaKnown RBP22.2■■□□□ 1.14
RUBCN-208ENST00000471364 ABCA10Q8WWZ4 1543 aa22.2■■□□□ 1.14
RUBCN-208ENST00000471364 ABCA5Q8WWZ7 1642 aa22.2■■□□□ 1.14
RUBCN-208ENST00000471364 GRIN2AQ12879 1464 aa22.07■■□□□ 1.12
RUBCN-208ENST00000471364 WRNQ14191 1432 aaPredicted RBP eCLIP22.06■■□□□ 1.12
RUBCN-208ENST00000471364 ADAMTS12P58397 1594 aa22.04■■□□□ 1.12
RUBCN-208ENST00000471364 BIVM-ERCC5R4GMW8 1640 aa22.03■■□□□ 1.12
RUBCN-208ENST00000471364 TOP2BQ02880 1626 aa22.02■■□□□ 1.11
RUBCN-208ENST00000471364 CEP170Q5SW79 1584 aa22■■□□□ 1.11
RUBCN-208ENST00000471364 ERCC6L2Q5T890 1561 aa21.99■■□□□ 1.11
RUBCN-208ENST00000471364 NUP160Q12769 1436 aa21.98■■□□□ 1.11
RUBCN-208ENST00000471364 AEBP2Q6ZN18 517 aaPredicted RBP21.96■■□□□ 1.11
RUBCN-208ENST00000471364 FHAD1B1AJZ9 1412 aa21.96■■□□□ 1.11
RUBCN-208ENST00000471364 SHROOM2Q13796 1616 aa21.95■■□□□ 1.1
RUBCN-208ENST00000471364 ERICH3Q5RHP9 1530 aa21.93■■□□□ 1.1
RUBCN-208ENST00000471364 KIF13AQ9H1H9 1805 aa21.82■■□□□ 1.08
RUBCN-208ENST00000471364 PRG4Q92954 1404 aaPredicted RBP21.8■■□□□ 1.08
RUBCN-208ENST00000471364 JPH4Q96JJ6 628 aa21.76■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 165.8 ms