RNA–Protein interactions for RNA: ENST00000471357.1

LINC00880-201, long intergenic non-protein coding RNA 880, humanhuman

TSL 1 (best) BASIC

Gene LINC00880, Length 2,018 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00880-201ENST00000471357 NISCHQ9Y2I1 1504 aa27.32■■□□□ 1.96
LINC00880-201ENST00000471357 CCDC180Q9P1Z9 1646 aa23.85■■□□□ 1.41
LINC00880-201ENST00000471357 ZCCHC6Q5VYS8 1495 aaKnown RBP22.91■■□□□ 1.26
LINC00880-201ENST00000471357 ABCC9O60706 1549 aa22.68■■□□□ 1.22
LINC00880-201ENST00000471357 DCAF8L2P0C7V8 631 aa22.64■■□□□ 1.21
LINC00880-201ENST00000471357 DCAF1Q9Y4B6 1507 aa22.59■■□□□ 1.21
LINC00880-201ENST00000471357 MYO15BQ96JP2 1530 aa22.37■■□□□ 1.17
LINC00880-201ENST00000471357 NACADO15069 1562 aa22.26■■□□□ 1.15
LINC00880-201ENST00000471357 SHROOM4Q9ULL8 1493 aa22.2■■□□□ 1.14
LINC00880-201ENST00000471357 RB1CC1Q8TDY2 1594 aa22.1■■□□□ 1.13
LINC00880-201ENST00000471357 SCRIBQ14160 1630 aa21.91■■□□□ 1.1
LINC00880-201ENST00000471357 UNC13AQ9UPW8 1703 aa21.6■■□□□ 1.05
LINC00880-201ENST00000471357 BICRAQ9NZM4 1560 aa21.41■■□□□ 1.02
LINC00880-201ENST00000471357 PABPN1Q86U42 306 aaKnown RBP eCLIP21.39■■□□□ 1.01
LINC00880-201ENST00000471357 SUPT5HO00267 1087 aaKnown RBP21.33■■□□□ 1.01
LINC00880-201ENST00000471357 CECR2Q9BXF3 1484 aa21.23■□□□□ 0.99
LINC00880-201ENST00000471357 RSF1Q96T23 1441 aaPredicted RBP21.15■□□□□ 0.98
LINC00880-201ENST00000471357 BAZ1AQ9NRL2 1556 aaPredicted RBP21.1■□□□□ 0.97
LINC00880-201ENST00000471357 MROH2BQ7Z745 1585 aa21.09■□□□□ 0.97
LINC00880-201ENST00000471357 SMARCA4P51532 1647 aa21.01■□□□□ 0.95
LINC00880-201ENST00000471357 WIZO95785 1651 aa20.9■□□□□ 0.94
LINC00880-201ENST00000471357 EIF4G1Q04637 1599 aaKnown RBP20.79■□□□□ 0.92
LINC00880-201ENST00000471357 PEG3Q9GZU2 1588 aa20.76■□□□□ 0.91
LINC00880-201ENST00000471357 ATAD2BQ9ULI0 1458 aa20.71■□□□□ 0.91
LINC00880-201ENST00000471357 SMARCA2P51531 1590 aa20.69■□□□□ 0.9
LINC00880-201ENST00000471357 TOP2AP11388 1531 aaKnown RBP20.69■□□□□ 0.9
LINC00880-201ENST00000471357 BAZ1BQ9UIG0 1483 aaKnown RBP20.58■□□□□ 0.89
LINC00880-201ENST00000471357 NCAPD3P42695 1498 aa20.56■□□□□ 0.88
LINC00880-201ENST00000471357 CC2D2AQ9P2K1 1620 aa20.51■□□□□ 0.87
LINC00880-201ENST00000471357 HMGXB3Q12766 1538 aa20.5■□□□□ 0.87
LINC00880-201ENST00000471357 CCDC88BA6NC98 1476 aa20.49■□□□□ 0.87
LINC00880-201ENST00000471357 CHIC1Q5VXU3 224 aa20.36■□□□□ 0.85
LINC00880-201ENST00000471357 DNAJC5BQ9UF47 199 aa20.12■□□□□ 0.81
LINC00880-201ENST00000471357 TRIM41Q8WV44 630 aa20.08■□□□□ 0.8
LINC00880-201ENST00000471357 CFTRP13569 1480 aa20.07■□□□□ 0.8
LINC00880-201ENST00000471357 CADPSQ9ULU8 1353 aa20.04■□□□□ 0.8
LINC00880-201ENST00000471357 ABCC8Q09428 1581 aa20■□□□□ 0.79
LINC00880-201ENST00000471357 WRNQ14191 1432 aaPredicted RBP eCLIP19.92■□□□□ 0.78
LINC00880-201ENST00000471357 PRDM2Q13029 1718 aa19.9■□□□□ 0.78
LINC00880-201ENST00000471357 NESP48681 1621 aa19.86■□□□□ 0.77
LINC00880-201ENST00000471357 LAMC3Q9Y6N6 1575 aa19.86■□□□□ 0.77
LINC00880-201ENST00000471357 SYNJ1O43426 1573 aa19.81■□□□□ 0.76
LINC00880-201ENST00000471357 FANCD2Q9BXW9 1451 aa19.79■□□□□ 0.76
LINC00880-201ENST00000471357 TOP2BQ02880 1626 aa19.75■□□□□ 0.75
LINC00880-201ENST00000471357 PDS5BQ9NTI5 1447 aa19.75■□□□□ 0.75
LINC00880-201ENST00000471357 CUX1P39880 1505 aa19.72■□□□□ 0.75
LINC00880-201ENST00000471357 BIVM-ERCC5R4GMW8 1640 aa19.72■□□□□ 0.75
LINC00880-201ENST00000471357 FAM9AQ8IZU1 332 aaPredicted RBP19.69■□□□□ 0.74
LINC00880-201ENST00000471357 CEP164Q9UPV0 1460 aa19.68■□□□□ 0.74
LINC00880-201ENST00000471357 SOGA1O94964 1423 aa19.63■□□□□ 0.73
LINC00880-201ENST00000471357 KIF21AQ7Z4S6 1674 aa19.6■□□□□ 0.73
LINC00880-201ENST00000471357 DNMBPQ6XZF7 1577 aa19.59■□□□□ 0.73
LINC00880-201ENST00000471357 EEA1Q15075 1411 aa19.58■□□□□ 0.73
LINC00880-201ENST00000471357 LOC105371045A0A1W2PR82 267 aa19.57■□□□□ 0.72
LINC00880-201ENST00000471357 TOPBP1Q92547 1522 aa19.56■□□□□ 0.72
LINC00880-201ENST00000471357 RUSC2Q8N2Y8 1516 aa19.55■□□□□ 0.72
LINC00880-201ENST00000471357 URB2Q14146 1524 aaKnown RBP19.54■□□□□ 0.72
LINC00880-201ENST00000471357 FGD5Q6ZNL6 1462 aa19.53■□□□□ 0.72
LINC00880-201ENST00000471357 CSRNP3Q8WYN3 585 aa19.51■□□□□ 0.71
LINC00880-201ENST00000471357 MRC2Q9UBG0 1479 aa19.47■□□□□ 0.71
LINC00880-201ENST00000471357 ERCC6Q03468 1493 aa19.47■□□□□ 0.71
LINC00880-201ENST00000471357 POLA1P09884 1462 aaPredicted RBP19.46■□□□□ 0.71
LINC00880-201ENST00000471357 KIF27Q86VH2 1401 aa19.43■□□□□ 0.7
LINC00880-201ENST00000471357 EHMT2Q96KQ7 1210 aa19.41■□□□□ 0.7
LINC00880-201ENST00000471357 CUX2O14529 1486 aa19.4■□□□□ 0.7
LINC00880-201ENST00000471357 RAD54L2Q9Y4B4 1467 aa19.4■□□□□ 0.7
LINC00880-201ENST00000471357 ABCA10Q8WWZ4 1543 aa19.37■□□□□ 0.69
LINC00880-201ENST00000471357 WDR62O43379 1518 aa19.36■□□□□ 0.69
LINC00880-201ENST00000471357 THOC2Q8NI27 1593 aaKnown RBP19.31■□□□□ 0.68
LINC00880-201ENST00000471357 KIF21BO75037 1637 aa19.3■□□□□ 0.68
LINC00880-201ENST00000471357 GOLGA3Q08378 1498 aa19.3■□□□□ 0.68
LINC00880-201ENST00000471357 IGF1RP08069 1367 aa19.28■□□□□ 0.68
LINC00880-201ENST00000471357 WDR97A6NE52 1622 aa19.27■□□□□ 0.68
LINC00880-201ENST00000471357 TARBP1Q13395 1621 aaKnown RBP19.26■□□□□ 0.67
LINC00880-201ENST00000471357 PRXQ9BXM0 1461 aa19.26■□□□□ 0.67
LINC00880-201ENST00000471357 UBTFP17480 764 aaKnown RBP19.25■□□□□ 0.67
LINC00880-201ENST00000471357 TDRD9Q8NDG6 1382 aaKnown RBP19.24■□□□□ 0.67
LINC00880-201ENST00000471357 IFT140Q96RY7 1462 aa19.23■□□□□ 0.67
LINC00880-201ENST00000471357 TNIKQ9UKE5 1360 aa19.23■□□□□ 0.67
LINC00880-201ENST00000471357 RAPGEF2Q9Y4G8 1499 aa19.22■□□□□ 0.67
LINC00880-201ENST00000471357 ERICH3Q5RHP9 1530 aa19.2■□□□□ 0.66
LINC00880-201ENST00000471357 ABCA5Q8WWZ7 1642 aa19.19■□□□□ 0.66
LINC00880-201ENST00000471357 GAPVD1Q14C86 1478 aa19.19■□□□□ 0.66
LINC00880-201ENST00000471357 CARMIL1Q5VZK9 1371 aa19.18■□□□□ 0.66
LINC00880-201ENST00000471357 AQRO60306 1485 aaKnown RBP eCLIP19.13■□□□□ 0.65
LINC00880-201ENST00000471357 ZNF608Q9ULD9 1512 aaPredicted RBP19.11■□□□□ 0.65
LINC00880-201ENST00000471357 CUL7Q14999 1698 aa19.1■□□□□ 0.65
LINC00880-201ENST00000471357 CEP162Q5TB80 1403 aa19.1■□□□□ 0.65
LINC00880-201ENST00000471357 GRIN2BQ13224 1484 aa19.06■□□□□ 0.64
LINC00880-201ENST00000471357 PBRM1Q86U86 1689 aa19.05■□□□□ 0.64
LINC00880-201ENST00000471357 EIF4G3O43432 1585 aaKnown RBP19.02■□□□□ 0.64
LINC00880-201ENST00000471357 FHAD1B1AJZ9 1412 aa18.99■□□□□ 0.63
LINC00880-201ENST00000471357 CLIP1P30622 1438 aa18.99■□□□□ 0.63
LINC00880-201ENST00000471357 ADAMTS12P58397 1594 aa18.96■□□□□ 0.63
LINC00880-201ENST00000471357 RANGAP1P46060 587 aaPredicted RBP18.95■□□□□ 0.62
LINC00880-201ENST00000471357 SNAPC4Q5SXM2 1469 aa18.93■□□□□ 0.62
LINC00880-201ENST00000471357 MAGI1Q96QZ7 1491 aaPredicted RBP18.91■□□□□ 0.62
LINC00880-201ENST00000471357 CTTNBP2Q8WZ74 1663 aa18.85■□□□□ 0.61
LINC00880-201ENST00000471357 SYNJ2O15056 1496 aa18.84■□□□□ 0.61
LINC00880-201ENST00000471357 CHMP7Q8WUX9 453 aaPredicted RBP18.83■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms