RNA–Protein interactions for RNA: ENST00000471266.5

MFSD1-208, Transcript of major facilitator superfamily domain containing 1, humanhuman

TSL 4

Gene MFSD1, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MFSD1-208ENST00000471266 NISCHQ9Y2I1 1504 aa46.14■■■■■ 4.98
MFSD1-208ENST00000471266 CCDC180Q9P1Z9 1646 aa41.23■■■■■ 4.19
MFSD1-208ENST00000471266 ABCC9O60706 1549 aa41.08■■■■■ 4.17
MFSD1-208ENST00000471266 RB1CC1Q8TDY2 1594 aa39.2■■■■□ 3.87
MFSD1-208ENST00000471266 DCAF8L2P0C7V8 631 aa39.01■■■■□ 3.84
MFSD1-208ENST00000471266 NACADO15069 1562 aa38.99■■■■□ 3.83
MFSD1-208ENST00000471266 MYO15BQ96JP2 1530 aa38.53■■■■□ 3.76
MFSD1-208ENST00000471266 PABPN1Q86U42 306 aaKnown RBP eCLIP38.34■■■■□ 3.73
MFSD1-208ENST00000471266 DNAJC5BQ9UF47 199 aa38.32■■■■□ 3.72
MFSD1-208ENST00000471266 ZCCHC6Q5VYS8 1495 aaKnown RBP38.28■■■■□ 3.72
MFSD1-208ENST00000471266 UNC13AQ9UPW8 1703 aa38.15■■■■□ 3.7
MFSD1-208ENST00000471266 DCAF1Q9Y4B6 1507 aa38.12■■■■□ 3.69
MFSD1-208ENST00000471266 BICRAQ9NZM4 1560 aa37.97■■■■□ 3.67
MFSD1-208ENST00000471266 SCRIBQ14160 1630 aa37.62■■■■□ 3.61
MFSD1-208ENST00000471266 SHROOM4Q9ULL8 1493 aa37.56■■■■□ 3.6
MFSD1-208ENST00000471266 CC2D2AQ9P2K1 1620 aa37.07■■■■□ 3.53
MFSD1-208ENST00000471266 EIF4G1Q04637 1599 aaKnown RBP37.07■■■■□ 3.52
MFSD1-208ENST00000471266 CECR2Q9BXF3 1484 aa36.99■■■■□ 3.51
MFSD1-208ENST00000471266 NCAPD3P42695 1498 aa36.02■■■■□ 3.36
MFSD1-208ENST00000471266 ATAD2BQ9ULI0 1458 aa35.93■■■■□ 3.34
MFSD1-208ENST00000471266 SMARCA4P51532 1647 aa35.9■■■■□ 3.34
MFSD1-208ENST00000471266 SMARCA2P51531 1590 aa35.85■■■■□ 3.33
MFSD1-208ENST00000471266 BAZ1AQ9NRL2 1556 aaPredicted RBP35.81■■■■□ 3.32
MFSD1-208ENST00000471266 HMGXB3Q12766 1538 aa35.73■■■■□ 3.31
MFSD1-208ENST00000471266 BAZ1BQ9UIG0 1483 aaKnown RBP35.61■■■■□ 3.29
MFSD1-208ENST00000471266 PEG3Q9GZU2 1588 aa35.55■■■■□ 3.28
MFSD1-208ENST00000471266 MROH2BQ7Z745 1585 aa35.55■■■■□ 3.28
MFSD1-208ENST00000471266 ERCC6Q03468 1493 aa35.49■■■■□ 3.27
MFSD1-208ENST00000471266 NESP48681 1621 aa35.33■■■■□ 3.25
MFSD1-208ENST00000471266 CUX2O14529 1486 aa35.3■■■■□ 3.24
MFSD1-208ENST00000471266 LAMC3Q9Y6N6 1575 aa35.13■■■■□ 3.21
MFSD1-208ENST00000471266 WIZO95785 1651 aa35.1■■■■□ 3.21
MFSD1-208ENST00000471266 DNAJC5Q9H3Z4 198 aa35.06■■■■□ 3.2
MFSD1-208ENST00000471266 PDS5BQ9NTI5 1447 aa35■■■■□ 3.19
MFSD1-208ENST00000471266 CADPSQ9ULU8 1353 aa34.97■■■■□ 3.19
MFSD1-208ENST00000471266 RSF1Q96T23 1441 aaPredicted RBP34.94■■■■□ 3.18
MFSD1-208ENST00000471266 THOC2Q8NI27 1593 aaKnown RBP34.87■■■■□ 3.17
MFSD1-208ENST00000471266 KIF21AQ7Z4S6 1674 aa34.81■■■■□ 3.16
MFSD1-208ENST00000471266 TOP2AP11388 1531 aaKnown RBP34.71■■■■□ 3.15
MFSD1-208ENST00000471266 MRC2Q9UBG0 1479 aa34.63■■■■□ 3.13
MFSD1-208ENST00000471266 CFTRP13569 1480 aa34.58■■■■□ 3.13
MFSD1-208ENST00000471266 CEP164Q9UPV0 1460 aa34.56■■■■□ 3.12
MFSD1-208ENST00000471266 FANCD2Q9BXW9 1451 aa34.54■■■■□ 3.12
MFSD1-208ENST00000471266 WDR62O43379 1518 aa34.5■■■■□ 3.11
MFSD1-208ENST00000471266 CCDC88BA6NC98 1476 aa34.34■■■■□ 3.09
MFSD1-208ENST00000471266 URB2Q14146 1524 aaKnown RBP34.2■■■■□ 3.07
MFSD1-208ENST00000471266 PRDM2Q13029 1718 aa34.12■■■■□ 3.05
MFSD1-208ENST00000471266 ABCC8Q09428 1581 aa33.89■■■■□ 3.02
MFSD1-208ENST00000471266 TOPBP1Q92547 1522 aa33.89■■■■□ 3.02
MFSD1-208ENST00000471266 IFT140Q96RY7 1462 aa33.86■■■■□ 3.01
MFSD1-208ENST00000471266 OSCARQ8IYS5 282 aa33.84■■■■□ 3.01
MFSD1-208ENST00000471266 DNMBPQ6XZF7 1577 aa33.77■■■■□ 3
MFSD1-208ENST00000471266 ZNF608Q9ULD9 1512 aaPredicted RBP33.74■■■□□ 2.99
MFSD1-208ENST00000471266 SUPT5HO00267 1087 aaKnown RBP33.69■■■□□ 2.98
MFSD1-208ENST00000471266 TRIM41Q8WV44 630 aa33.67■■■□□ 2.98
MFSD1-208ENST00000471266 POLA1P09884 1462 aaPredicted RBP33.56■■■□□ 2.96
MFSD1-208ENST00000471266 EIF4G3O43432 1585 aaKnown RBP33.53■■■□□ 2.96
MFSD1-208ENST00000471266 TARBP1Q13395 1621 aaKnown RBP33.51■■■□□ 2.96
MFSD1-208ENST00000471266 AQRO60306 1485 aaKnown RBP eCLIP33.5■■■□□ 2.95
MFSD1-208ENST00000471266 SOGA1O94964 1423 aa33.48■■■□□ 2.95
MFSD1-208ENST00000471266 RAD54L2Q9Y4B4 1467 aa33.44■■■□□ 2.94
MFSD1-208ENST00000471266 FGD5Q6ZNL6 1462 aa33.4■■■□□ 2.94
MFSD1-208ENST00000471266 CUX1P39880 1505 aa33.38■■■□□ 2.93
MFSD1-208ENST00000471266 TDRD9Q8NDG6 1382 aaKnown RBP33.37■■■□□ 2.93
MFSD1-208ENST00000471266 FBLN2P98095 1184 aa33.34■■■□□ 2.93
MFSD1-208ENST00000471266 WDR97A6NE52 1622 aa33.23■■■□□ 2.91
MFSD1-208ENST00000471266 RIMBP3CA6NJZ7 1639 aa33.21■■■□□ 2.91
MFSD1-208ENST00000471266 RIMBP3BA6NNM3 1639 aa33.21■■■□□ 2.91
MFSD1-208ENST00000471266 RIMBP3Q9UFD9 1639 aa33.21■■■□□ 2.91
MFSD1-208ENST00000471266 CHD1O14646 1710 aa33.2■■■□□ 2.91
MFSD1-208ENST00000471266 ARHGEF11O15085 1522 aa33.18■■■□□ 2.9
MFSD1-208ENST00000471266 SNAPC4Q5SXM2 1469 aa33.16■■■□□ 2.9
MFSD1-208ENST00000471266 GRIN2BQ13224 1484 aa33.13■■■□□ 2.89
MFSD1-208ENST00000471266 CHMP7Q8WUX9 453 aaPredicted RBP33.13■■■□□ 2.89
MFSD1-208ENST00000471266 MAGI1Q96QZ7 1491 aaPredicted RBP33.09■■■□□ 2.89
MFSD1-208ENST00000471266 GAPVD1Q14C86 1478 aa33.05■■■□□ 2.88
MFSD1-208ENST00000471266 ABCA10Q8WWZ4 1543 aa33.02■■■□□ 2.88
MFSD1-208ENST00000471266 CYB5RLQ6IPT4 315 aa33.02■■■□□ 2.88
MFSD1-208ENST00000471266 WRNQ14191 1432 aaPredicted RBP eCLIP33.01■■■□□ 2.87
MFSD1-208ENST00000471266 SYNJ2O15056 1496 aa32.99■■■□□ 2.87
MFSD1-208ENST00000471266 SYNJ1O43426 1573 aa32.92■■■□□ 2.86
MFSD1-208ENST00000471266 TOP2BQ02880 1626 aa32.9■■■□□ 2.86
MFSD1-208ENST00000471266 PBRM1Q86U86 1689 aa32.9■■■□□ 2.86
MFSD1-208ENST00000471266 ABCA5Q8WWZ7 1642 aa32.89■■■□□ 2.86
MFSD1-208ENST00000471266 BIVM-ERCC5R4GMW8 1640 aa32.88■■■□□ 2.85
MFSD1-208ENST00000471266 CLASP1Q7Z460 1538 aa32.87■■■□□ 2.85
MFSD1-208ENST00000471266 ARAP1Q96P48 1450 aa32.86■■■□□ 2.85
MFSD1-208ENST00000471266 GRIN2AQ12879 1464 aa32.68■■■□□ 2.82
MFSD1-208ENST00000471266 FHAD1B1AJZ9 1412 aa32.65■■■□□ 2.82
MFSD1-208ENST00000471266 ADAMTS12P58397 1594 aa32.64■■■□□ 2.82
MFSD1-208ENST00000471266 ERICH3Q5RHP9 1530 aa32.62■■■□□ 2.81
MFSD1-208ENST00000471266 TRHP20396 242 aaPredicted RBP32.61■■■□□ 2.81
MFSD1-208ENST00000471266 NUP160Q12769 1436 aa32.56■■■□□ 2.8
MFSD1-208ENST00000471266 CEP170Q5SW79 1584 aa32.5■■■□□ 2.79
MFSD1-208ENST00000471266 KIF27Q86VH2 1401 aa32.37■■■□□ 2.77
MFSD1-208ENST00000471266 ERCC6L2Q5T890 1561 aa32.36■■■□□ 2.77
MFSD1-208ENST00000471266 JPH4Q96JJ6 628 aa32.32■■■□□ 2.76
MFSD1-208ENST00000471266 SHROOM2Q13796 1616 aa32.32■■■□□ 2.76
MFSD1-208ENST00000471266 IGF1RP08069 1367 aa32.31■■■□□ 2.76
MFSD1-208ENST00000471266 PRG4Q92954 1404 aaPredicted RBP32.26■■■□□ 2.76
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms