RNA–Protein interactions for RNA: ENST00000471161.1

TMEM139-206, Transcript of transmembrane protein 139, humanhuman

TSL 1 (best)

Gene TMEM139, Length 1,724 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM139-206ENST00000471161 NISCHQ9Y2I1 1504 aa29.72■■■□□ 2.35
TMEM139-206ENST00000471161 CCDC180Q9P1Z9 1646 aa25.9■■□□□ 1.74
TMEM139-206ENST00000471161 ZCCHC6Q5VYS8 1495 aaKnown RBP24.97■■□□□ 1.59
TMEM139-206ENST00000471161 DCAF8L2P0C7V8 631 aa24.55■■□□□ 1.52
TMEM139-206ENST00000471161 ABCC9O60706 1549 aa24.53■■□□□ 1.52
TMEM139-206ENST00000471161 DCAF1Q9Y4B6 1507 aa24.53■■□□□ 1.52
TMEM139-206ENST00000471161 SHROOM4Q9ULL8 1493 aa24.3■■□□□ 1.48
TMEM139-206ENST00000471161 MYO15BQ96JP2 1530 aa24.23■■□□□ 1.47
TMEM139-206ENST00000471161 NACADO15069 1562 aa24.11■■□□□ 1.45
TMEM139-206ENST00000471161 RB1CC1Q8TDY2 1594 aa23.9■■□□□ 1.42
TMEM139-206ENST00000471161 SCRIBQ14160 1630 aa23.87■■□□□ 1.41
TMEM139-206ENST00000471161 UNC13AQ9UPW8 1703 aa23.53■■□□□ 1.36
TMEM139-206ENST00000471161 SUPT5HO00267 1087 aaKnown RBP23.36■■□□□ 1.33
TMEM139-206ENST00000471161 BICRAQ9NZM4 1560 aa23.25■■□□□ 1.31
TMEM139-206ENST00000471161 PABPN1Q86U42 306 aaKnown RBP eCLIP23.15■■□□□ 1.3
TMEM139-206ENST00000471161 CECR2Q9BXF3 1484 aa23.14■■□□□ 1.3
TMEM139-206ENST00000471161 RSF1Q96T23 1441 aaPredicted RBP23.07■■□□□ 1.28
TMEM139-206ENST00000471161 MROH2BQ7Z745 1585 aa23■■□□□ 1.27
TMEM139-206ENST00000471161 BAZ1AQ9NRL2 1556 aaPredicted RBP22.93■■□□□ 1.26
TMEM139-206ENST00000471161 SMARCA4P51532 1647 aa22.86■■□□□ 1.25
TMEM139-206ENST00000471161 WIZO95785 1651 aa22.83■■□□□ 1.25
TMEM139-206ENST00000471161 PEG3Q9GZU2 1588 aa22.56■■□□□ 1.2
TMEM139-206ENST00000471161 TOP2AP11388 1531 aaKnown RBP22.54■■□□□ 1.2
TMEM139-206ENST00000471161 EIF4G1Q04637 1599 aaKnown RBP22.52■■□□□ 1.2
TMEM139-206ENST00000471161 ATAD2BQ9ULI0 1458 aa22.47■■□□□ 1.19
TMEM139-206ENST00000471161 SMARCA2P51531 1590 aa22.43■■□□□ 1.18
TMEM139-206ENST00000471161 CHIC1Q5VXU3 224 aa22.36■■□□□ 1.17
TMEM139-206ENST00000471161 BAZ1BQ9UIG0 1483 aaKnown RBP22.33■■□□□ 1.17
TMEM139-206ENST00000471161 CCDC88BA6NC98 1476 aa22.32■■□□□ 1.16
TMEM139-206ENST00000471161 NCAPD3P42695 1498 aa22.26■■□□□ 1.15
TMEM139-206ENST00000471161 HMGXB3Q12766 1538 aa22.22■■□□□ 1.15
TMEM139-206ENST00000471161 CC2D2AQ9P2K1 1620 aa22.2■■□□□ 1.14
TMEM139-206ENST00000471161 TRIM41Q8WV44 630 aa21.92■■□□□ 1.1
TMEM139-206ENST00000471161 DNAJC5BQ9UF47 199 aa21.92■■□□□ 1.1
TMEM139-206ENST00000471161 ABCC8Q09428 1581 aa21.89■■□□□ 1.1
TMEM139-206ENST00000471161 CFTRP13569 1480 aa21.77■■□□□ 1.08
TMEM139-206ENST00000471161 PRDM2Q13029 1718 aa21.69■■□□□ 1.06
TMEM139-206ENST00000471161 WRNQ14191 1432 aaPredicted RBP eCLIP21.69■■□□□ 1.06
TMEM139-206ENST00000471161 CADPSQ9ULU8 1353 aa21.69■■□□□ 1.06
TMEM139-206ENST00000471161 SYNJ1O43426 1573 aa21.65■■□□□ 1.06
TMEM139-206ENST00000471161 FAM9AQ8IZU1 332 aaPredicted RBP21.58■■□□□ 1.04
TMEM139-206ENST00000471161 NESP48681 1621 aa21.57■■□□□ 1.04
TMEM139-206ENST00000471161 LOC105371045A0A1W2PR82 267 aa21.54■■□□□ 1.04
TMEM139-206ENST00000471161 TOP2BQ02880 1626 aa21.53■■□□□ 1.04
TMEM139-206ENST00000471161 BIVM-ERCC5R4GMW8 1640 aa21.52■■□□□ 1.04
TMEM139-206ENST00000471161 CUX1P39880 1505 aa21.5■■□□□ 1.03
TMEM139-206ENST00000471161 LAMC3Q9Y6N6 1575 aa21.5■■□□□ 1.03
TMEM139-206ENST00000471161 FANCD2Q9BXW9 1451 aa21.47■■□□□ 1.03
TMEM139-206ENST00000471161 SOGA1O94964 1423 aa21.47■■□□□ 1.03
TMEM139-206ENST00000471161 RUSC2Q8N2Y8 1516 aa21.42■■□□□ 1.02
TMEM139-206ENST00000471161 EEA1Q15075 1411 aa21.33■■□□□ 1.01
TMEM139-206ENST00000471161 CEP164Q9UPV0 1460 aa21.32■■□□□ 1
TMEM139-206ENST00000471161 PDS5BQ9NTI5 1447 aa21.31■■□□□ 1
TMEM139-206ENST00000471161 KIF21AQ7Z4S6 1674 aa21.31■■□□□ 1
TMEM139-206ENST00000471161 EHMT2Q96KQ7 1210 aa21.3■■□□□ 1
TMEM139-206ENST00000471161 DNMBPQ6XZF7 1577 aa21.27■■□□□ 1
TMEM139-206ENST00000471161 CSRNP3Q8WYN3 585 aa21.26■□□□□ 0.99
TMEM139-206ENST00000471161 FGD5Q6ZNL6 1462 aa21.25■□□□□ 0.99
TMEM139-206ENST00000471161 TOPBP1Q92547 1522 aa21.25■□□□□ 0.99
TMEM139-206ENST00000471161 URB2Q14146 1524 aaKnown RBP21.23■□□□□ 0.99
TMEM139-206ENST00000471161 POLA1P09884 1462 aaPredicted RBP21.14■□□□□ 0.97
TMEM139-206ENST00000471161 KIF27Q86VH2 1401 aa21.12■□□□□ 0.97
TMEM139-206ENST00000471161 KIF21BO75037 1637 aa21.11■□□□□ 0.97
TMEM139-206ENST00000471161 CUX2O14529 1486 aa21.1■□□□□ 0.97
TMEM139-206ENST00000471161 RAD54L2Q9Y4B4 1467 aa21.1■□□□□ 0.97
TMEM139-206ENST00000471161 GOLGA3Q08378 1498 aa21.08■□□□□ 0.97
TMEM139-206ENST00000471161 MRC2Q9UBG0 1479 aa21.06■□□□□ 0.96
TMEM139-206ENST00000471161 ABCA10Q8WWZ4 1543 aa21.04■□□□□ 0.96
TMEM139-206ENST00000471161 RAPGEF2Q9Y4G8 1499 aa21.02■□□□□ 0.96
TMEM139-206ENST00000471161 PRXQ9BXM0 1461 aa21.01■□□□□ 0.95
TMEM139-206ENST00000471161 TNIKQ9UKE5 1360 aa21.01■□□□□ 0.95
TMEM139-206ENST00000471161 WDR97A6NE52 1622 aa21.01■□□□□ 0.95
TMEM139-206ENST00000471161 UBTFP17480 764 aaKnown RBP20.99■□□□□ 0.95
TMEM139-206ENST00000471161 ERCC6Q03468 1493 aa20.99■□□□□ 0.95
TMEM139-206ENST00000471161 WDR62O43379 1518 aa20.97■□□□□ 0.95
TMEM139-206ENST00000471161 IGF1RP08069 1367 aa20.97■□□□□ 0.95
TMEM139-206ENST00000471161 AEBP2Q6ZN18 517 aaPredicted RBP20.96■□□□□ 0.95
TMEM139-206ENST00000471161 ERICH3Q5RHP9 1530 aa20.96■□□□□ 0.95
TMEM139-206ENST00000471161 TARBP1Q13395 1621 aaKnown RBP20.94■□□□□ 0.94
TMEM139-206ENST00000471161 THOC2Q8NI27 1593 aaKnown RBP20.93■□□□□ 0.94
TMEM139-206ENST00000471161 CEP162Q5TB80 1403 aa20.92■□□□□ 0.94
TMEM139-206ENST00000471161 ABCA5Q8WWZ7 1642 aa20.89■□□□□ 0.93
TMEM139-206ENST00000471161 TDRD9Q8NDG6 1382 aaKnown RBP20.88■□□□□ 0.93
TMEM139-206ENST00000471161 CARMIL1Q5VZK9 1371 aa20.86■□□□□ 0.93
TMEM139-206ENST00000471161 GAPVD1Q14C86 1478 aa20.83■□□□□ 0.92
TMEM139-206ENST00000471161 IFT140Q96RY7 1462 aa20.8■□□□□ 0.92
TMEM139-206ENST00000471161 CUL7Q14999 1698 aa20.79■□□□□ 0.92
TMEM139-206ENST00000471161 CLIP1P30622 1438 aa20.75■□□□□ 0.91
TMEM139-206ENST00000471161 AQRO60306 1485 aaKnown RBP eCLIP20.75■□□□□ 0.91
TMEM139-206ENST00000471161 PBRM1Q86U86 1689 aa20.75■□□□□ 0.91
TMEM139-206ENST00000471161 ZNF608Q9ULD9 1512 aaPredicted RBP20.75■□□□□ 0.91
TMEM139-206ENST00000471161 RANGAP1P46060 587 aaPredicted RBP20.7■□□□□ 0.9
TMEM139-206ENST00000471161 EIF4G3O43432 1585 aaKnown RBP20.65■□□□□ 0.9
TMEM139-206ENST00000471161 GRIN2BQ13224 1484 aa20.65■□□□□ 0.9
TMEM139-206ENST00000471161 ADAMTS12P58397 1594 aa20.61■□□□□ 0.89
TMEM139-206ENST00000471161 CTTNBP2Q8WZ74 1663 aa20.6■□□□□ 0.89
TMEM139-206ENST00000471161 FHAD1B1AJZ9 1412 aa20.59■□□□□ 0.89
TMEM139-206ENST00000471161 ARAP1Q96P48 1450 aa20.59■□□□□ 0.89
TMEM139-206ENST00000471161 ARHGAP35Q9NRY4 1499 aa20.57■□□□□ 0.88
TMEM139-206ENST00000471161 VPS8Q8N3P4 1428 aa20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 139.3 ms