RNA–Protein interactions for RNA: ENST00000471135.2

RAI1-203, Transcript of retinoic acid induced 1, humanhuman

TSL 3

Gene RAI1, Length 570 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAI1-203ENST00000471135 NISCHQ9Y2I1 1504 aa32.35■■■□□ 2.77
RAI1-203ENST00000471135 CCDC180Q9P1Z9 1646 aa28.93■■■□□ 2.22
RAI1-203ENST00000471135 ABCC9O60706 1549 aa28.45■■■□□ 2.15
RAI1-203ENST00000471135 RB1CC1Q8TDY2 1594 aa27.29■■□□□ 1.96
RAI1-203ENST00000471135 NACADO15069 1562 aa27.19■■□□□ 1.94
RAI1-203ENST00000471135 DCAF8L2P0C7V8 631 aa27■■□□□ 1.91
RAI1-203ENST00000471135 MYO15BQ96JP2 1530 aa26.95■■□□□ 1.9
RAI1-203ENST00000471135 ZCCHC6Q5VYS8 1495 aaKnown RBP26.92■■□□□ 1.9
RAI1-203ENST00000471135 UNC13AQ9UPW8 1703 aa26.76■■□□□ 1.88
RAI1-203ENST00000471135 DCAF1Q9Y4B6 1507 aa26.75■■□□□ 1.87
RAI1-203ENST00000471135 BICRAQ9NZM4 1560 aa26.5■■□□□ 1.83
RAI1-203ENST00000471135 PABPN1Q86U42 306 aaKnown RBP eCLIP26.49■■□□□ 1.83
RAI1-203ENST00000471135 SCRIBQ14160 1630 aa26.36■■□□□ 1.81
RAI1-203ENST00000471135 DNAJC5BQ9UF47 199 aa26.26■■□□□ 1.79
RAI1-203ENST00000471135 SHROOM4Q9ULL8 1493 aa26.18■■□□□ 1.78
RAI1-203ENST00000471135 EIF4G1Q04637 1599 aaKnown RBP25.81■■□□□ 1.72
RAI1-203ENST00000471135 CC2D2AQ9P2K1 1620 aa25.76■■□□□ 1.71
RAI1-203ENST00000471135 CECR2Q9BXF3 1484 aa25.59■■□□□ 1.69
RAI1-203ENST00000471135 SMARCA4P51532 1647 aa25.19■■□□□ 1.62
RAI1-203ENST00000471135 BAZ1AQ9NRL2 1556 aaPredicted RBP25.1■■□□□ 1.61
RAI1-203ENST00000471135 NCAPD3P42695 1498 aa25.06■■□□□ 1.6
RAI1-203ENST00000471135 ATAD2BQ9ULI0 1458 aa25.05■■□□□ 1.6
RAI1-203ENST00000471135 SMARCA2P51531 1590 aa25.04■■□□□ 1.6
RAI1-203ENST00000471135 HMGXB3Q12766 1538 aa24.97■■□□□ 1.59
RAI1-203ENST00000471135 MROH2BQ7Z745 1585 aa24.93■■□□□ 1.58
RAI1-203ENST00000471135 PEG3Q9GZU2 1588 aa24.93■■□□□ 1.58
RAI1-203ENST00000471135 BAZ1BQ9UIG0 1483 aaKnown RBP24.85■■□□□ 1.57
RAI1-203ENST00000471135 WIZO95785 1651 aa24.68■■□□□ 1.54
RAI1-203ENST00000471135 DNAJC5Q9H3Z4 198 aa24.57■■□□□ 1.52
RAI1-203ENST00000471135 NESP48681 1621 aa24.57■■□□□ 1.52
RAI1-203ENST00000471135 RSF1Q96T23 1441 aaPredicted RBP24.53■■□□□ 1.52
RAI1-203ENST00000471135 ERCC6Q03468 1493 aa24.53■■□□□ 1.52
RAI1-203ENST00000471135 LAMC3Q9Y6N6 1575 aa24.48■■□□□ 1.51
RAI1-203ENST00000471135 TOP2AP11388 1531 aaKnown RBP24.4■■□□□ 1.5
RAI1-203ENST00000471135 CUX2O14529 1486 aa24.37■■□□□ 1.49
RAI1-203ENST00000471135 KIF21AQ7Z4S6 1674 aa24.34■■□□□ 1.49
RAI1-203ENST00000471135 CADPSQ9ULU8 1353 aa24.3■■□□□ 1.48
RAI1-203ENST00000471135 THOC2Q8NI27 1593 aaKnown RBP24.29■■□□□ 1.48
RAI1-203ENST00000471135 PDS5BQ9NTI5 1447 aa24.26■■□□□ 1.47
RAI1-203ENST00000471135 CFTRP13569 1480 aa24.14■■□□□ 1.46
RAI1-203ENST00000471135 MRC2Q9UBG0 1479 aa24.07■■□□□ 1.44
RAI1-203ENST00000471135 PRDM2Q13029 1718 aa24.07■■□□□ 1.44
RAI1-203ENST00000471135 CEP164Q9UPV0 1460 aa24.07■■□□□ 1.44
RAI1-203ENST00000471135 CCDC88BA6NC98 1476 aa24.06■■□□□ 1.44
RAI1-203ENST00000471135 FANCD2Q9BXW9 1451 aa24.06■■□□□ 1.44
RAI1-203ENST00000471135 WDR62O43379 1518 aa24.03■■□□□ 1.44
RAI1-203ENST00000471135 URB2Q14146 1524 aaKnown RBP23.85■■□□□ 1.41
RAI1-203ENST00000471135 SUPT5HO00267 1087 aaKnown RBP23.68■■□□□ 1.38
RAI1-203ENST00000471135 TOPBP1Q92547 1522 aa23.66■■□□□ 1.38
RAI1-203ENST00000471135 DNMBPQ6XZF7 1577 aa23.64■■□□□ 1.37
RAI1-203ENST00000471135 ABCC8Q09428 1581 aa23.61■■□□□ 1.37
RAI1-203ENST00000471135 IFT140Q96RY7 1462 aa23.56■■□□□ 1.36
RAI1-203ENST00000471135 ZNF608Q9ULD9 1512 aaPredicted RBP23.49■■□□□ 1.35
RAI1-203ENST00000471135 TARBP1Q13395 1621 aaKnown RBP23.46■■□□□ 1.35
RAI1-203ENST00000471135 POLA1P09884 1462 aaPredicted RBP23.44■■□□□ 1.34
RAI1-203ENST00000471135 EIF4G3O43432 1585 aaKnown RBP23.44■■□□□ 1.34
RAI1-203ENST00000471135 CUX1P39880 1505 aa23.41■■□□□ 1.34
RAI1-203ENST00000471135 FGD5Q6ZNL6 1462 aa23.36■■□□□ 1.33
RAI1-203ENST00000471135 RAD54L2Q9Y4B4 1467 aa23.33■■□□□ 1.33
RAI1-203ENST00000471135 AQRO60306 1485 aaKnown RBP eCLIP23.3■■□□□ 1.32
RAI1-203ENST00000471135 SOGA1O94964 1423 aa23.29■■□□□ 1.32
RAI1-203ENST00000471135 WDR97A6NE52 1622 aa23.26■■□□□ 1.31
RAI1-203ENST00000471135 OSCARQ8IYS5 282 aa23.23■■□□□ 1.31
RAI1-203ENST00000471135 CHD1O14646 1710 aa23.21■■□□□ 1.31
RAI1-203ENST00000471135 TDRD9Q8NDG6 1382 aaKnown RBP23.2■■□□□ 1.3
RAI1-203ENST00000471135 BIVM-ERCC5R4GMW8 1640 aa23.19■■□□□ 1.3
RAI1-203ENST00000471135 TOP2BQ02880 1626 aa23.16■■□□□ 1.3
RAI1-203ENST00000471135 SYNJ1O43426 1573 aa23.16■■□□□ 1.3
RAI1-203ENST00000471135 WRNQ14191 1432 aaPredicted RBP eCLIP23.14■■□□□ 1.295e-6■■■■■ 41.8
RAI1-203ENST00000471135 PBRM1Q86U86 1689 aa23.11■■□□□ 1.29
RAI1-203ENST00000471135 ABCA10Q8WWZ4 1543 aa23.11■■□□□ 1.29
RAI1-203ENST00000471135 ABCA5Q8WWZ7 1642 aa23.1■■□□□ 1.29
RAI1-203ENST00000471135 SNAPC4Q5SXM2 1469 aa23.1■■□□□ 1.29
RAI1-203ENST00000471135 GRIN2BQ13224 1484 aa23.08■■□□□ 1.29
RAI1-203ENST00000471135 MAGI1Q96QZ7 1491 aaPredicted RBP23.06■■□□□ 1.28
RAI1-203ENST00000471135 GAPVD1Q14C86 1478 aa23.05■■□□□ 1.28
RAI1-203ENST00000471135 FBLN2P98095 1184 aa23.01■■□□□ 1.27
RAI1-203ENST00000471135 RIMBP3CA6NJZ7 1639 aa23■■□□□ 1.27
RAI1-203ENST00000471135 RIMBP3BA6NNM3 1639 aa23■■□□□ 1.27
RAI1-203ENST00000471135 RIMBP3Q9UFD9 1639 aa23■■□□□ 1.27
RAI1-203ENST00000471135 SYNJ2O15056 1496 aa22.97■■□□□ 1.27
RAI1-203ENST00000471135 ARHGEF11O15085 1522 aa22.96■■□□□ 1.27
RAI1-203ENST00000471135 TRIM41Q8WV44 630 aa22.94■■□□□ 1.26
RAI1-203ENST00000471135 CLASP1Q7Z460 1538 aa22.91■■□□□ 1.26
RAI1-203ENST00000471135 CHMP7Q8WUX9 453 aaPredicted RBP22.9■■□□□ 1.26
RAI1-203ENST00000471135 ADAMTS12P58397 1594 aa22.89■■□□□ 1.26
RAI1-203ENST00000471135 ERICH3Q5RHP9 1530 aa22.84■■□□□ 1.25
RAI1-203ENST00000471135 GRIN2AQ12879 1464 aa22.8■■□□□ 1.24
RAI1-203ENST00000471135 FHAD1B1AJZ9 1412 aa22.76■■□□□ 1.23
RAI1-203ENST00000471135 ARAP1Q96P48 1450 aa22.75■■□□□ 1.23
RAI1-203ENST00000471135 CEP170Q5SW79 1584 aa22.73■■□□□ 1.23
RAI1-203ENST00000471135 NUP160Q12769 1436 aa22.7■■□□□ 1.22
RAI1-203ENST00000471135 KIF27Q86VH2 1401 aa22.66■■□□□ 1.22
RAI1-203ENST00000471135 CYB5RLQ6IPT4 315 aa22.66■■□□□ 1.22
RAI1-203ENST00000471135 CUL7Q14999 1698 aa22.62■■□□□ 1.21
RAI1-203ENST00000471135 SHROOM2Q13796 1616 aa22.61■■□□□ 1.21
RAI1-203ENST00000471135 RUSC2Q8N2Y8 1516 aa22.57■■□□□ 1.2
RAI1-203ENST00000471135 IGF1RP08069 1367 aa22.57■■□□□ 1.2
RAI1-203ENST00000471135 ERCC6L2Q5T890 1561 aa22.57■■□□□ 1.2
RAI1-203ENST00000471135 CARMIL1Q5VZK9 1371 aa22.43■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms