RNA–Protein interactions for RNA: ENST00000470950.1

LDLRAP1-203, Transcript of low density lipoprotein receptor adaptor protein 1, humanhuman

TSL 3

Gene LDLRAP1, Length 995 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1-203ENST00000470950 NISCHQ9Y2I1 1504 aa34.4■■■■□ 3.1
LDLRAP1-203ENST00000470950 ABCC9O60706 1549 aa31.58■■■□□ 2.65
LDLRAP1-203ENST00000470950 CCDC180Q9P1Z9 1646 aa31.05■■■□□ 2.56
LDLRAP1-203ENST00000470950 DNAJC5BQ9UF47 199 aa30.09■■■□□ 2.41
LDLRAP1-203ENST00000470950 RB1CC1Q8TDY2 1594 aa29.81■■■□□ 2.36
LDLRAP1-203ENST00000470950 NACADO15069 1562 aa29.5■■■□□ 2.31
LDLRAP1-203ENST00000470950 PABPN1Q86U42 306 aaKnown RBP eCLIP29.35■■■□□ 2.29
LDLRAP1-203ENST00000470950 DCAF8L2P0C7V8 631 aa29.29■■■□□ 2.28
LDLRAP1-203ENST00000470950 UNC13AQ9UPW8 1703 aa29.11■■■□□ 2.25
LDLRAP1-203ENST00000470950 BICRAQ9NZM4 1560 aa28.97■■■□□ 2.23
LDLRAP1-203ENST00000470950 MYO15BQ96JP2 1530 aa28.94■■■□□ 2.22
LDLRAP1-203ENST00000470950 SHROOM4Q9ULL8 1493 aa28.53■■■□□ 2.16
LDLRAP1-203ENST00000470950 CECR2Q9BXF3 1484 aa28.5■■■□□ 2.15
LDLRAP1-203ENST00000470950 CC2D2AQ9P2K1 1620 aa28.48■■■□□ 2.15
LDLRAP1-203ENST00000470950 ZCCHC6Q5VYS8 1495 aaKnown RBP28.4■■■□□ 2.14
LDLRAP1-203ENST00000470950 DCAF1Q9Y4B6 1507 aa28.38■■■□□ 2.13
LDLRAP1-203ENST00000470950 EIF4G1Q04637 1599 aaKnown RBP28.3■■■□□ 2.12
LDLRAP1-203ENST00000470950 SCRIBQ14160 1630 aa28.28■■■□□ 2.12
LDLRAP1-203ENST00000470950 DNAJC5Q9H3Z4 198 aa27.99■■■□□ 2.07
LDLRAP1-203ENST00000470950 CUX2O14529 1486 aa27.42■■□□□ 1.98
LDLRAP1-203ENST00000470950 ERCC6Q03468 1493 aa27.3■■□□□ 1.96
LDLRAP1-203ENST00000470950 NCAPD3P42695 1498 aa27.26■■□□□ 1.95
LDLRAP1-203ENST00000470950 ATAD2BQ9ULI0 1458 aa27.11■■□□□ 1.93
LDLRAP1-203ENST00000470950 HMGXB3Q12766 1538 aa26.99■■□□□ 1.91
LDLRAP1-203ENST00000470950 NESP48681 1621 aa26.98■■□□□ 1.91
LDLRAP1-203ENST00000470950 SMARCA2P51531 1590 aa26.98■■□□□ 1.91
LDLRAP1-203ENST00000470950 SMARCA4P51532 1647 aa26.93■■□□□ 1.9
LDLRAP1-203ENST00000470950 BAZ1BQ9UIG0 1483 aaKnown RBP26.81■■□□□ 1.88
LDLRAP1-203ENST00000470950 THOC2Q8NI27 1593 aaKnown RBP26.79■■□□□ 1.88
LDLRAP1-203ENST00000470950 BAZ1AQ9NRL2 1556 aaPredicted RBP26.73■■□□□ 1.87
LDLRAP1-203ENST00000470950 LAMC3Q9Y6N6 1575 aa26.7■■□□□ 1.86
LDLRAP1-203ENST00000470950 PEG3Q9GZU2 1588 aa26.67■■□□□ 1.86
LDLRAP1-203ENST00000470950 PDS5BQ9NTI5 1447 aa26.59■■□□□ 1.85
LDLRAP1-203ENST00000470950 KIF21AQ7Z4S6 1674 aa26.58■■□□□ 1.85
LDLRAP1-203ENST00000470950 TRIM41Q8WV44 630 aa26.55■■□□□ 1.84
LDLRAP1-203ENST00000470950 MROH2BQ7Z745 1585 aa26.51■■□□□ 1.83
LDLRAP1-203ENST00000470950 CADPSQ9ULU8 1353 aa26.42■■□□□ 1.82
LDLRAP1-203ENST00000470950 MRC2Q9UBG0 1479 aa26.37■■□□□ 1.81
LDLRAP1-203ENST00000470950 WDR62O43379 1518 aa26.32■■□□□ 1.8
LDLRAP1-203ENST00000470950 CEP164Q9UPV0 1460 aa26.17■■□□□ 1.78
LDLRAP1-203ENST00000470950 WIZO95785 1651 aa26.15■■□□□ 1.78
LDLRAP1-203ENST00000470950 FANCD2Q9BXW9 1451 aa26.11■■□□□ 1.77
LDLRAP1-203ENST00000470950 OSCARQ8IYS5 282 aa26.1■■□□□ 1.77
LDLRAP1-203ENST00000470950 CFTRP13569 1480 aa26■■□□□ 1.75
LDLRAP1-203ENST00000470950 URB2Q14146 1524 aaKnown RBP25.92■■□□□ 1.74
LDLRAP1-203ENST00000470950 TOP2AP11388 1531 aaKnown RBP25.79■■□□□ 1.72
LDLRAP1-203ENST00000470950 RSF1Q96T23 1441 aaPredicted RBP25.79■■□□□ 1.72
LDLRAP1-203ENST00000470950 RIMBP3CA6NJZ7 1639 aa25.78■■□□□ 1.72
LDLRAP1-203ENST00000470950 RIMBP3BA6NNM3 1639 aa25.78■■□□□ 1.72
LDLRAP1-203ENST00000470950 RIMBP3Q9UFD9 1639 aa25.78■■□□□ 1.72
LDLRAP1-203ENST00000470950 ZNF608Q9ULD9 1512 aaPredicted RBP25.68■■□□□ 1.7
LDLRAP1-203ENST00000470950 IFT140Q96RY7 1462 aa25.68■■□□□ 1.7
LDLRAP1-203ENST00000470950 ARHGEF11O15085 1522 aa25.66■■□□□ 1.7
LDLRAP1-203ENST00000470950 PRDM2Q13029 1718 aa25.63■■□□□ 1.69
LDLRAP1-203ENST00000470950 TOPBP1Q92547 1522 aa25.55■■□□□ 1.68
LDLRAP1-203ENST00000470950 CYB5RLQ6IPT4 315 aa25.54■■□□□ 1.68
LDLRAP1-203ENST00000470950 CCDC88BA6NC98 1476 aa25.53■■□□□ 1.68
LDLRAP1-203ENST00000470950 EIF4G3O43432 1585 aaKnown RBP25.48■■□□□ 1.67
LDLRAP1-203ENST00000470950 ABCC8Q09428 1581 aa25.46■■□□□ 1.67
LDLRAP1-203ENST00000470950 AQRO60306 1485 aaKnown RBP eCLIP25.4■■□□□ 1.662e-6■■■□□ 15.5
LDLRAP1-203ENST00000470950 DNMBPQ6XZF7 1577 aa25.4■■□□□ 1.66
LDLRAP1-203ENST00000470950 TRHP20396 242 aaPredicted RBP25.4■■□□□ 1.66
LDLRAP1-203ENST00000470950 CHD1O14646 1710 aa25.38■■□□□ 1.65
LDLRAP1-203ENST00000470950 ARAP1Q96P48 1450 aa25.38■■□□□ 1.65
LDLRAP1-203ENST00000470950 TARBP1Q13395 1621 aaKnown RBP25.35■■□□□ 1.65
LDLRAP1-203ENST00000470950 FBLN2P98095 1184 aa25.34■■□□□ 1.65
LDLRAP1-203ENST00000470950 POLA1P09884 1462 aaPredicted RBP25.27■■□□□ 1.64
LDLRAP1-203ENST00000470950 RAD54L2Q9Y4B4 1467 aa25.19■■□□□ 1.62
LDLRAP1-203ENST00000470950 TDRD9Q8NDG6 1382 aaKnown RBP25.18■■□□□ 1.62
LDLRAP1-203ENST00000470950 SOGA1O94964 1423 aa25.15■■□□□ 1.62
LDLRAP1-203ENST00000470950 SNAPC4Q5SXM2 1469 aa25.11■■□□□ 1.61
LDLRAP1-203ENST00000470950 CLASP1Q7Z460 1538 aa25.11■■□□□ 1.61
LDLRAP1-203ENST00000470950 CHMP7Q8WUX9 453 aaPredicted RBP25.07■■□□□ 1.6
LDLRAP1-203ENST00000470950 WDR97A6NE52 1622 aa25.05■■□□□ 1.6
LDLRAP1-203ENST00000470950 SYNJ1O43426 1573 aa25.05■■□□□ 1.6
LDLRAP1-203ENST00000470950 FGD5Q6ZNL6 1462 aa25.03■■□□□ 1.6
LDLRAP1-203ENST00000470950 MAGI1Q96QZ7 1491 aaPredicted RBP25.02■■□□□ 1.6
LDLRAP1-203ENST00000470950 AEBP2Q6ZN18 517 aaPredicted RBP25.02■■□□□ 1.6
LDLRAP1-203ENST00000470950 GRIN2BQ13224 1484 aa24.98■■□□□ 1.59
LDLRAP1-203ENST00000470950 SYNJ2O15056 1496 aa24.96■■□□□ 1.59
LDLRAP1-203ENST00000470950 CUX1P39880 1505 aa24.93■■□□□ 1.58
LDLRAP1-203ENST00000470950 GAPVD1Q14C86 1478 aa24.89■■□□□ 1.57
LDLRAP1-203ENST00000470950 PBRM1Q86U86 1689 aa24.81■■□□□ 1.56
LDLRAP1-203ENST00000470950 ABCA10Q8WWZ4 1543 aa24.72■■□□□ 1.55
LDLRAP1-203ENST00000470950 ABCA5Q8WWZ7 1642 aa24.72■■□□□ 1.55
LDLRAP1-203ENST00000470950 ERCC6L2Q5T890 1561 aa24.68■■□□□ 1.54
LDLRAP1-203ENST00000470950 GRIN2AQ12879 1464 aa24.65■■□□□ 1.54
LDLRAP1-203ENST00000470950 CEP170Q5SW79 1584 aa24.6■■□□□ 1.53
LDLRAP1-203ENST00000470950 NUP160Q12769 1436 aa24.6■■□□□ 1.53
LDLRAP1-203ENST00000470950 ADAMTS12P58397 1594 aa24.56■■□□□ 1.52
LDLRAP1-203ENST00000470950 WRNQ14191 1432 aaPredicted RBP eCLIP24.53■■□□□ 1.52
LDLRAP1-203ENST00000470950 SHROOM2Q13796 1616 aa24.52■■□□□ 1.52
LDLRAP1-203ENST00000470950 FHAD1B1AJZ9 1412 aa24.5■■□□□ 1.51
LDLRAP1-203ENST00000470950 KIF13AQ9H1H9 1805 aa24.45■■□□□ 1.5
LDLRAP1-203ENST00000470950 PRG4Q92954 1404 aaPredicted RBP24.41■■□□□ 1.5
LDLRAP1-203ENST00000470950 ERICH3Q5RHP9 1530 aa24.4■■□□□ 1.5
LDLRAP1-203ENST00000470950 TOP2BQ02880 1626 aa24.39■■□□□ 1.49
LDLRAP1-203ENST00000470950 BIVM-ERCC5R4GMW8 1640 aa24.38■■□□□ 1.49
LDLRAP1-203ENST00000470950 JPH4Q96JJ6 628 aa24.37■■□□□ 1.49
LDLRAP1-203ENST00000470950 FAM69CQ0P6D2 419 aa24.33■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms