RNA–Protein interactions for RNA: ENST00000470902.5

LCN2-204, Transcript of lipocalin 2, humanhuman

TSL 5

Gene LCN2, Length 877 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN2-204ENST00000470902 NISCHQ9Y2I1 1504 aa39.1■■■■□ 3.85
LCN2-204ENST00000470902 ABCC9O60706 1549 aa35.26■■■■□ 3.23
LCN2-204ENST00000470902 CCDC180Q9P1Z9 1646 aa35.12■■■■□ 3.21
LCN2-204ENST00000470902 RB1CC1Q8TDY2 1594 aa33.5■■■□□ 2.95
LCN2-204ENST00000470902 NACADO15069 1562 aa33.23■■■□□ 2.91
LCN2-204ENST00000470902 DNAJC5BQ9UF47 199 aa33.13■■■□□ 2.89
LCN2-204ENST00000470902 DCAF8L2P0C7V8 631 aa33.12■■■□□ 2.89
LCN2-204ENST00000470902 PABPN1Q86U42 306 aaKnown RBP eCLIP32.82■■■□□ 2.84
LCN2-204ENST00000470902 UNC13AQ9UPW8 1703 aa32.74■■■□□ 2.83
LCN2-204ENST00000470902 MYO15BQ96JP2 1530 aa32.71■■■□□ 2.83
LCN2-204ENST00000470902 BICRAQ9NZM4 1560 aa32.51■■■□□ 2.79
LCN2-204ENST00000470902 ZCCHC6Q5VYS8 1495 aaKnown RBP32.38■■■□□ 2.77
LCN2-204ENST00000470902 DCAF1Q9Y4B6 1507 aa32.26■■■□□ 2.76
LCN2-204ENST00000470902 SCRIBQ14160 1630 aa32.04■■■□□ 2.72
LCN2-204ENST00000470902 SHROOM4Q9ULL8 1493 aa32.04■■■□□ 2.72
LCN2-204ENST00000470902 CC2D2AQ9P2K1 1620 aa31.83■■■□□ 2.69
LCN2-204ENST00000470902 CECR2Q9BXF3 1484 aa31.76■■■□□ 2.67
LCN2-204ENST00000470902 EIF4G1Q04637 1599 aaKnown RBP31.73■■■□□ 2.67
LCN2-204ENST00000470902 NCAPD3P42695 1498 aa30.67■■■□□ 2.5
LCN2-204ENST00000470902 ATAD2BQ9ULI0 1458 aa30.57■■■□□ 2.48
LCN2-204ENST00000470902 SMARCA4P51532 1647 aa30.53■■■□□ 2.48
LCN2-204ENST00000470902 DNAJC5Q9H3Z4 198 aa30.5■■■□□ 2.47
LCN2-204ENST00000470902 SMARCA2P51531 1590 aa30.49■■■□□ 2.47
LCN2-204ENST00000470902 ERCC6Q03468 1493 aa30.47■■■□□ 2.47
LCN2-204ENST00000470902 HMGXB3Q12766 1538 aa30.44■■■□□ 2.46
LCN2-204ENST00000470902 CUX2O14529 1486 aa30.41■■■□□ 2.46
LCN2-204ENST00000470902 BAZ1AQ9NRL2 1556 aaPredicted RBP30.37■■■□□ 2.45
LCN2-204ENST00000470902 BAZ1BQ9UIG0 1483 aaKnown RBP30.3■■■□□ 2.44
LCN2-204ENST00000470902 NESP48681 1621 aa30.25■■■□□ 2.43
LCN2-204ENST00000470902 PEG3Q9GZU2 1588 aa30.2■■■□□ 2.43
LCN2-204ENST00000470902 MROH2BQ7Z745 1585 aa30.14■■■□□ 2.42
LCN2-204ENST00000470902 LAMC3Q9Y6N6 1575 aa30.01■■■□□ 2.39
LCN2-204ENST00000470902 THOC2Q8NI27 1593 aaKnown RBP29.95■■■□□ 2.39
LCN2-204ENST00000470902 KIF21AQ7Z4S6 1674 aa29.85■■■□□ 2.37
LCN2-204ENST00000470902 PDS5BQ9NTI5 1447 aa29.85■■■□□ 2.37
LCN2-204ENST00000470902 WIZO95785 1651 aa29.79■■■□□ 2.36
LCN2-204ENST00000470902 CADPSQ9ULU8 1353 aa29.75■■■□□ 2.35
LCN2-204ENST00000470902 MRC2Q9UBG0 1479 aa29.61■■■□□ 2.33
LCN2-204ENST00000470902 WDR62O43379 1518 aa29.51■■■□□ 2.32
LCN2-204ENST00000470902 CEP164Q9UPV0 1460 aa29.48■■■□□ 2.31
LCN2-204ENST00000470902 RSF1Q96T23 1441 aaPredicted RBP29.47■■■□□ 2.31
LCN2-204ENST00000470902 FANCD2Q9BXW9 1451 aa29.43■■■□□ 2.3
LCN2-204ENST00000470902 TOP2AP11388 1531 aaKnown RBP29.39■■■□□ 2.3
LCN2-204ENST00000470902 CFTRP13569 1480 aa29.38■■■□□ 2.29
LCN2-204ENST00000470902 URB2Q14146 1524 aaKnown RBP29.19■■■□□ 2.26
LCN2-204ENST00000470902 TRIM41Q8WV44 630 aa29.18■■■□□ 2.26
LCN2-204ENST00000470902 PRDM2Q13029 1718 aa29.09■■■□□ 2.25
LCN2-204ENST00000470902 CCDC88BA6NC98 1476 aa29.06■■■□□ 2.24
LCN2-204ENST00000470902 OSCARQ8IYS5 282 aa29.02■■■□□ 2.24
LCN2-204ENST00000470902 IFT140Q96RY7 1462 aa28.88■■■□□ 2.21
LCN2-204ENST00000470902 TOPBP1Q92547 1522 aa28.85■■■□□ 2.21
LCN2-204ENST00000470902 ZNF608Q9ULD9 1512 aaPredicted RBP28.85■■■□□ 2.21
LCN2-204ENST00000470902 ABCC8Q09428 1581 aa28.78■■■□□ 2.2
LCN2-204ENST00000470902 DNMBPQ6XZF7 1577 aa28.74■■■□□ 2.19
LCN2-204ENST00000470902 EIF4G3O43432 1585 aaKnown RBP28.68■■■□□ 2.18
LCN2-204ENST00000470902 RIMBP3CA6NJZ7 1639 aa28.65■■■□□ 2.18
LCN2-204ENST00000470902 RIMBP3BA6NNM3 1639 aa28.65■■■□□ 2.18
LCN2-204ENST00000470902 RIMBP3Q9UFD9 1639 aa28.65■■■□□ 2.18
LCN2-204ENST00000470902 TARBP1Q13395 1621 aaKnown RBP28.6■■■□□ 2.17
LCN2-204ENST00000470902 AQRO60306 1485 aaKnown RBP eCLIP28.58■■■□□ 2.17
LCN2-204ENST00000470902 POLA1P09884 1462 aaPredicted RBP28.55■■■□□ 2.16
LCN2-204ENST00000470902 ARHGEF11O15085 1522 aa28.54■■■□□ 2.16
LCN2-204ENST00000470902 CHD1O14646 1710 aa28.49■■■□□ 2.15
LCN2-204ENST00000470902 RAD54L2Q9Y4B4 1467 aa28.46■■■□□ 2.15
LCN2-204ENST00000470902 FBLN2P98095 1184 aa28.45■■■□□ 2.14
LCN2-204ENST00000470902 SOGA1O94964 1423 aa28.43■■■□□ 2.14
LCN2-204ENST00000470902 TDRD9Q8NDG6 1382 aaKnown RBP28.39■■■□□ 2.14
LCN2-204ENST00000470902 CYB5RLQ6IPT4 315 aa28.37■■■□□ 2.13
LCN2-204ENST00000470902 FGD5Q6ZNL6 1462 aa28.37■■■□□ 2.13
LCN2-204ENST00000470902 CUX1P39880 1505 aa28.33■■■□□ 2.13
LCN2-204ENST00000470902 SNAPC4Q5SXM2 1469 aa28.29■■■□□ 2.12
LCN2-204ENST00000470902 WDR97A6NE52 1622 aa28.29■■■□□ 2.12
LCN2-204ENST00000470902 ARAP1Q96P48 1450 aa28.26■■■□□ 2.11
LCN2-204ENST00000470902 CHMP7Q8WUX9 453 aaPredicted RBP28.2■■■□□ 2.1
LCN2-204ENST00000470902 MAGI1Q96QZ7 1491 aaPredicted RBP28.2■■■□□ 2.1
LCN2-204ENST00000470902 GRIN2BQ13224 1484 aa28.19■■■□□ 2.1
LCN2-204ENST00000470902 CLASP1Q7Z460 1538 aa28.15■■■□□ 2.1
LCN2-204ENST00000470902 SUPT5HO00267 1087 aaKnown RBP28.15■■■□□ 2.1
LCN2-204ENST00000470902 SYNJ1O43426 1573 aa28.14■■■□□ 2.1
LCN2-204ENST00000470902 SYNJ2O15056 1496 aa28.11■■■□□ 2.09
LCN2-204ENST00000470902 TRHP20396 242 aaPredicted RBP28.1■■■□□ 2.09
LCN2-204ENST00000470902 GAPVD1Q14C86 1478 aa28.08■■■□□ 2.09
LCN2-204ENST00000470902 PBRM1Q86U86 1689 aa28.08■■■□□ 2.09
LCN2-204ENST00000470902 ABCA10Q8WWZ4 1543 aa28.02■■■□□ 2.08
LCN2-204ENST00000470902 ABCA5Q8WWZ7 1642 aa28■■■□□ 2.07
LCN2-204ENST00000470902 WRNQ14191 1432 aaPredicted RBP eCLIP27.92■■■□□ 2.06
LCN2-204ENST00000470902 TOP2BQ02880 1626 aa27.84■■■□□ 2.05
LCN2-204ENST00000470902 BIVM-ERCC5R4GMW8 1640 aa27.84■■■□□ 2.05
LCN2-204ENST00000470902 GRIN2AQ12879 1464 aa27.83■■■□□ 2.04
LCN2-204ENST00000470902 ADAMTS12P58397 1594 aa27.8■■■□□ 2.04
LCN2-204ENST00000470902 CEP170Q5SW79 1584 aa27.73■■■□□ 2.03
LCN2-204ENST00000470902 FHAD1B1AJZ9 1412 aa27.72■■■□□ 2.03
LCN2-204ENST00000470902 NUP160Q12769 1436 aa27.72■■■□□ 2.03
LCN2-204ENST00000470902 ERCC6L2Q5T890 1561 aa27.72■■■□□ 2.03
LCN2-204ENST00000470902 ERICH3Q5RHP9 1530 aa27.67■■■□□ 2.02
LCN2-204ENST00000470902 SHROOM2Q13796 1616 aa27.61■■■□□ 2.01
LCN2-204ENST00000470902 PRG4Q92954 1404 aaPredicted RBP27.49■■□□□ 1.99
LCN2-204ENST00000470902 JPH4Q96JJ6 628 aa27.46■■□□□ 1.99
LCN2-204ENST00000470902 RUSC2Q8N2Y8 1516 aa27.41■■□□□ 1.98
LCN2-204ENST00000470902 AEBP2Q6ZN18 517 aaPredicted RBP27.36■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms