RNA–Protein interactions for RNA: ENST00000470878.5

STX1A-207, Transcript of syntaxin 1A, humanhuman

TSL 3

Gene STX1A, Length 827 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STX1A-207ENST00000470878 NISCHQ9Y2I1 1504 aa18.24■□□□□ 0.51
STX1A-207ENST00000470878 CCDC180Q9P1Z9 1646 aa16.65■□□□□ 0.26
STX1A-207ENST00000470878 ABCC9O60706 1549 aa16.47■□□□□ 0.23
STX1A-207ENST00000470878 RB1CC1Q8TDY2 1594 aa15.79■□□□□ 0.12
STX1A-207ENST00000470878 DNAJC5BQ9UF47 199 aa15.78■□□□□ 0.12
STX1A-207ENST00000470878 NACADO15069 1562 aa15.66■□□□□ 0.1
STX1A-207ENST00000470878 UNC13AQ9UPW8 1703 aa15.58■□□□□ 0.08
STX1A-207ENST00000470878 MYO15BQ96JP2 1530 aa15.43■□□□□ 0.06
STX1A-207ENST00000470878 PABPN1Q86U42 306 aaKnown RBP eCLIP15.3■□□□□ 0.04
STX1A-207ENST00000470878 BICRAQ9NZM4 1560 aa15.27■□□□□ 0.03
STX1A-207ENST00000470878 DCAF8L2P0C7V8 631 aa15.23■□□□□ 0.03
STX1A-207ENST00000470878 SHROOM4Q9ULL8 1493 aa15.19■□□□□ 0.02
STX1A-207ENST00000470878 DCAF1Q9Y4B6 1507 aa15.17■□□□□ 0.02
STX1A-207ENST00000470878 ZCCHC6Q5VYS8 1495 aaKnown RBP15.1■□□□□ 0.01
STX1A-207ENST00000470878 CC2D2AQ9P2K1 1620 aa14.99□□□□□ -0.01
STX1A-207ENST00000470878 SCRIBQ14160 1630 aa14.95□□□□□ -0.02
STX1A-207ENST00000470878 EIF4G1Q04637 1599 aaKnown RBP14.92□□□□□ -0.02
STX1A-207ENST00000470878 CECR2Q9BXF3 1484 aa14.88□□□□□ -0.03
STX1A-207ENST00000470878 DNAJC5Q9H3Z4 198 aa14.55□□□□□ -0.08
STX1A-207ENST00000470878 CUX2O14529 1486 aa14.38□□□□□ -0.11
STX1A-207ENST00000470878 NCAPD3P42695 1498 aa14.36□□□□□ -0.11
STX1A-207ENST00000470878 SMARCA2P51531 1590 aa14.34□□□□□ -0.11
STX1A-207ENST00000470878 HMGXB3Q12766 1538 aa14.34□□□□□ -0.11
STX1A-207ENST00000470878 SMARCA4P51532 1647 aa14.33□□□□□ -0.12
STX1A-207ENST00000470878 ERCC6Q03468 1493 aa14.28□□□□□ -0.12
STX1A-207ENST00000470878 ATAD2BQ9ULI0 1458 aa14.26□□□□□ -0.13
STX1A-207ENST00000470878 BAZ1AQ9NRL2 1556 aaPredicted RBP14.23□□□□□ -0.13
STX1A-207ENST00000470878 PEG3Q9GZU2 1588 aa14.22□□□□□ -0.13
STX1A-207ENST00000470878 LAMC3Q9Y6N6 1575 aa14.17□□□□□ -0.14
STX1A-207ENST00000470878 BAZ1BQ9UIG0 1483 aaKnown RBP14.16□□□□□ -0.14
STX1A-207ENST00000470878 THOC2Q8NI27 1593 aaKnown RBP14.13□□□□□ -0.15
STX1A-207ENST00000470878 KIF21AQ7Z4S6 1674 aa14.12□□□□□ -0.15
STX1A-207ENST00000470878 NESP48681 1621 aa14.12□□□□□ -0.15
STX1A-207ENST00000470878 MROH2BQ7Z745 1585 aa14□□□□□ -0.17
STX1A-207ENST00000470878 PDS5BQ9NTI5 1447 aa13.99□□□□□ -0.17
STX1A-207ENST00000470878 PRDM2Q13029 1718 aa13.91□□□□□ -0.18
STX1A-207ENST00000470878 WIZO95785 1651 aa13.9□□□□□ -0.18
STX1A-207ENST00000470878 WDR62O43379 1518 aa13.9□□□□□ -0.19
STX1A-207ENST00000470878 MRC2Q9UBG0 1479 aa13.87□□□□□ -0.19
STX1A-207ENST00000470878 CADPSQ9ULU8 1353 aa13.87□□□□□ -0.19
STX1A-207ENST00000470878 CEP164Q9UPV0 1460 aa13.81□□□□□ -0.2
STX1A-207ENST00000470878 TRIM41Q8WV44 630 aa13.81□□□□□ -0.2
STX1A-207ENST00000470878 FANCD2Q9BXW9 1451 aa13.74□□□□□ -0.21
STX1A-207ENST00000470878 TOP2AP11388 1531 aaKnown RBP13.73□□□□□ -0.21
STX1A-207ENST00000470878 CFTRP13569 1480 aa13.73□□□□□ -0.21
STX1A-207ENST00000470878 RSF1Q96T23 1441 aaPredicted RBP13.64□□□□□ -0.23
STX1A-207ENST00000470878 URB2Q14146 1524 aaKnown RBP13.61□□□□□ -0.23
STX1A-207ENST00000470878 OSCARQ8IYS5 282 aa13.57□□□□□ -0.24
STX1A-207ENST00000470878 ABCC8Q09428 1581 aa13.55□□□□□ -0.24
STX1A-207ENST00000470878 IFT140Q96RY7 1462 aa13.54□□□□□ -0.24
STX1A-207ENST00000470878 RIMBP3CA6NJZ7 1639 aa13.53□□□□□ -0.24
STX1A-207ENST00000470878 RIMBP3BA6NNM3 1639 aa13.53□□□□□ -0.24
STX1A-207ENST00000470878 RIMBP3Q9UFD9 1639 aa13.53□□□□□ -0.24
STX1A-207ENST00000470878 CHD1O14646 1710 aa13.5□□□□□ -0.25
STX1A-207ENST00000470878 EIF4G3O43432 1585 aaKnown RBP13.49□□□□□ -0.25
STX1A-207ENST00000470878 DNMBPQ6XZF7 1577 aa13.49□□□□□ -0.25
STX1A-207ENST00000470878 TOPBP1Q92547 1522 aa13.48□□□□□ -0.25
STX1A-207ENST00000470878 CCDC88BA6NC98 1476 aa13.48□□□□□ -0.25
STX1A-207ENST00000470878 TARBP1Q13395 1621 aaKnown RBP13.44□□□□□ -0.26
STX1A-207ENST00000470878 WDR97A6NE52 1622 aa13.43□□□□□ -0.26
STX1A-207ENST00000470878 ZNF608Q9ULD9 1512 aaPredicted RBP13.43□□□□□ -0.26
STX1A-207ENST00000470878 ARHGEF11O15085 1522 aa13.42□□□□□ -0.26
STX1A-207ENST00000470878 POLA1P09884 1462 aaPredicted RBP13.32□□□□□ -0.28
STX1A-207ENST00000470878 PBRM1Q86U86 1689 aa13.28□□□□□ -0.28
STX1A-207ENST00000470878 AQRO60306 1485 aaKnown RBP eCLIP13.27□□□□□ -0.292e-6■■■■■ 26.9
STX1A-207ENST00000470878 SYNJ1O43426 1573 aa13.27□□□□□ -0.29
STX1A-207ENST00000470878 ARAP1Q96P48 1450 aa13.25□□□□□ -0.29
STX1A-207ENST00000470878 CYB5RLQ6IPT4 315 aa13.25□□□□□ -0.29
STX1A-207ENST00000470878 MAGI1Q96QZ7 1491 aaPredicted RBP13.24□□□□□ -0.29
STX1A-207ENST00000470878 CLASP1Q7Z460 1538 aa13.23□□□□□ -0.29
STX1A-207ENST00000470878 SOGA1O94964 1423 aa13.22□□□□□ -0.29
STX1A-207ENST00000470878 FGD5Q6ZNL6 1462 aa13.21□□□□□ -0.3
STX1A-207ENST00000470878 SNAPC4Q5SXM2 1469 aa13.2□□□□□ -0.3
STX1A-207ENST00000470878 RAD54L2Q9Y4B4 1467 aa13.19□□□□□ -0.3
STX1A-207ENST00000470878 CUX1P39880 1505 aa13.18□□□□□ -0.3
STX1A-207ENST00000470878 GRIN2BQ13224 1484 aa13.17□□□□□ -0.3
STX1A-207ENST00000470878 SYNJ2O15056 1496 aa13.16□□□□□ -0.3
STX1A-207ENST00000470878 FBLN2P98095 1184 aa13.16□□□□□ -0.3
STX1A-207ENST00000470878 ABCA5Q8WWZ7 1642 aa13.16□□□□□ -0.3
STX1A-207ENST00000470878 TRHP20396 242 aaPredicted RBP13.14□□□□□ -0.31
STX1A-207ENST00000470878 TDRD9Q8NDG6 1382 aaKnown RBP13.14□□□□□ -0.31
STX1A-207ENST00000470878 CHMP7Q8WUX9 453 aaPredicted RBP13.11□□□□□ -0.31
STX1A-207ENST00000470878 GAPVD1Q14C86 1478 aa13.1□□□□□ -0.31
STX1A-207ENST00000470878 ABCA10Q8WWZ4 1543 aa13.1□□□□□ -0.31
STX1A-207ENST00000470878 BIVM-ERCC5R4GMW8 1640 aa13.09□□□□□ -0.31
STX1A-207ENST00000470878 ADAMTS12P58397 1594 aa13.04□□□□□ -0.32
STX1A-207ENST00000470878 TOP2BQ02880 1626 aa13.03□□□□□ -0.32
STX1A-207ENST00000470878 SHROOM2Q13796 1616 aa13.03□□□□□ -0.32
STX1A-207ENST00000470878 GRIN2AQ12879 1464 aa13.01□□□□□ -0.33
STX1A-207ENST00000470878 KIF13AQ9H1H9 1805 aa13□□□□□ -0.33
STX1A-207ENST00000470878 ERICH3Q5RHP9 1530 aa12.98□□□□□ -0.33
STX1A-207ENST00000470878 WRNQ14191 1432 aaPredicted RBP eCLIP12.98□□□□□ -0.33
STX1A-207ENST00000470878 CEP170Q5SW79 1584 aa12.98□□□□□ -0.33
STX1A-207ENST00000470878 NUP160Q12769 1436 aa12.96□□□□□ -0.33
STX1A-207ENST00000470878 ERCC6L2Q5T890 1561 aa12.95□□□□□ -0.34
STX1A-207ENST00000470878 FHAD1B1AJZ9 1412 aa12.93□□□□□ -0.34
STX1A-207ENST00000470878 AEBP2Q6ZN18 517 aaPredicted RBP12.89□□□□□ -0.35
STX1A-207ENST00000470878 RUSC2Q8N2Y8 1516 aa12.88□□□□□ -0.35
STX1A-207ENST00000470878 CUL7Q14999 1698 aa12.85□□□□□ -0.35
STX1A-207ENST00000470878 MAPKBP1O60336 1514 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms