RNA–Protein interactions for RNA: ENST00000470756.5

ALCAM-204, Transcript of activated leukocyte cell adhesion molecule, humanhuman

TSL 1 (best)

Gene ALCAM, Length 1,770 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALCAM-204ENST00000470756 NISCHQ9Y2I1 1504 aa45.23■■■■■ 4.83
ALCAM-204ENST00000470756 CCDC180Q9P1Z9 1646 aa39.89■■■■□ 3.98
ALCAM-204ENST00000470756 ABCC9O60706 1549 aa38.59■■■■□ 3.77
ALCAM-204ENST00000470756 ZCCHC6Q5VYS8 1495 aaKnown RBP37.81■■■■□ 3.64
ALCAM-204ENST00000470756 DCAF8L2P0C7V8 631 aa37.78■■■■□ 3.64
ALCAM-204ENST00000470756 NACADO15069 1562 aa37.35■■■■□ 3.57
ALCAM-204ENST00000470756 DCAF1Q9Y4B6 1507 aa37.34■■■■□ 3.57
ALCAM-204ENST00000470756 RB1CC1Q8TDY2 1594 aa37.29■■■■□ 3.56
ALCAM-204ENST00000470756 MYO15BQ96JP2 1530 aa37.23■■■■□ 3.55
ALCAM-204ENST00000470756 SCRIBQ14160 1630 aa36.62■■■■□ 3.45
ALCAM-204ENST00000470756 UNC13AQ9UPW8 1703 aa36.52■■■■□ 3.44
ALCAM-204ENST00000470756 SHROOM4Q9ULL8 1493 aa36.35■■■■□ 3.41
ALCAM-204ENST00000470756 PABPN1Q86U42 306 aaKnown RBP eCLIP36.2■■■■□ 3.39
ALCAM-204ENST00000470756 BICRAQ9NZM4 1560 aa36.13■■■■□ 3.37
ALCAM-204ENST00000470756 CECR2Q9BXF3 1484 aa35.23■■■■□ 3.23
ALCAM-204ENST00000470756 EIF4G1Q04637 1599 aaKnown RBP35.16■■■■□ 3.22
ALCAM-204ENST00000470756 BAZ1AQ9NRL2 1556 aaPredicted RBP35.02■■■■□ 3.2
ALCAM-204ENST00000470756 SMARCA4P51532 1647 aa34.99■■■■□ 3.19
ALCAM-204ENST00000470756 MROH2BQ7Z745 1585 aa34.92■■■■□ 3.18
ALCAM-204ENST00000470756 CC2D2AQ9P2K1 1620 aa34.89■■■■□ 3.18
ALCAM-204ENST00000470756 DNAJC5BQ9UF47 199 aa34.81■■■■□ 3.16
ALCAM-204ENST00000470756 RSF1Q96T23 1441 aaPredicted RBP34.72■■■■□ 3.15
ALCAM-204ENST00000470756 SUPT5HO00267 1087 aaKnown RBP34.67■■■■□ 3.14
ALCAM-204ENST00000470756 WIZO95785 1651 aa34.62■■■■□ 3.13
ALCAM-204ENST00000470756 ATAD2BQ9ULI0 1458 aa34.62■■■■□ 3.13
ALCAM-204ENST00000470756 SMARCA2P51531 1590 aa34.59■■■■□ 3.13
ALCAM-204ENST00000470756 PEG3Q9GZU2 1588 aa34.54■■■■□ 3.12
ALCAM-204ENST00000470756 NCAPD3P42695 1498 aa34.44■■■■□ 3.1
ALCAM-204ENST00000470756 BAZ1BQ9UIG0 1483 aaKnown RBP34.42■■■■□ 3.1
ALCAM-204ENST00000470756 HMGXB3Q12766 1538 aa34.35■■■■□ 3.09
ALCAM-204ENST00000470756 TOP2AP11388 1531 aaKnown RBP34.21■■■■□ 3.07
ALCAM-204ENST00000470756 CCDC88BA6NC98 1476 aa33.83■■■■□ 3.01
ALCAM-204ENST00000470756 NESP48681 1621 aa33.57■■■□□ 2.97
ALCAM-204ENST00000470756 CHIC1Q5VXU3 224 aa33.55■■■□□ 2.96
ALCAM-204ENST00000470756 CADPSQ9ULU8 1353 aa33.53■■■□□ 2.96
ALCAM-204ENST00000470756 LAMC3Q9Y6N6 1575 aa33.47■■■□□ 2.95
ALCAM-204ENST00000470756 CFTRP13569 1480 aa33.44■■■□□ 2.94
ALCAM-204ENST00000470756 PRDM2Q13029 1718 aa33.29■■■□□ 2.92
ALCAM-204ENST00000470756 PDS5BQ9NTI5 1447 aa33.25■■■□□ 2.91
ALCAM-204ENST00000470756 ERCC6Q03468 1493 aa33.21■■■□□ 2.91
ALCAM-204ENST00000470756 KIF21AQ7Z4S6 1674 aa33.19■■■□□ 2.9
ALCAM-204ENST00000470756 FANCD2Q9BXW9 1451 aa33.18■■■□□ 2.9
ALCAM-204ENST00000470756 CEP164Q9UPV0 1460 aa33.09■■■□□ 2.89
ALCAM-204ENST00000470756 ABCC8Q09428 1581 aa32.88■■■□□ 2.85
ALCAM-204ENST00000470756 MRC2Q9UBG0 1479 aa32.88■■■□□ 2.85
ALCAM-204ENST00000470756 THOC2Q8NI27 1593 aaKnown RBP32.85■■■□□ 2.85
ALCAM-204ENST00000470756 URB2Q14146 1524 aaKnown RBP32.81■■■□□ 2.84
ALCAM-204ENST00000470756 WRNQ14191 1432 aaPredicted RBP eCLIP32.75■■■□□ 2.83
ALCAM-204ENST00000470756 WDR62O43379 1518 aa32.72■■■□□ 2.83
ALCAM-204ENST00000470756 DNMBPQ6XZF7 1577 aa32.72■■■□□ 2.83
ALCAM-204ENST00000470756 TOPBP1Q92547 1522 aa32.72■■■□□ 2.83
ALCAM-204ENST00000470756 CUX1P39880 1505 aa32.71■■■□□ 2.83
ALCAM-204ENST00000470756 SYNJ1O43426 1573 aa32.66■■■□□ 2.82
ALCAM-204ENST00000470756 TRIM41Q8WV44 630 aa32.6■■■□□ 2.81
ALCAM-204ENST00000470756 TOP2BQ02880 1626 aa32.58■■■□□ 2.81
ALCAM-204ENST00000470756 BIVM-ERCC5R4GMW8 1640 aa32.56■■■□□ 2.8
ALCAM-204ENST00000470756 FGD5Q6ZNL6 1462 aa32.52■■■□□ 2.8
ALCAM-204ENST00000470756 CUX2O14529 1486 aa32.49■■■□□ 2.79
ALCAM-204ENST00000470756 POLA1P09884 1462 aaPredicted RBP32.49■■■□□ 2.79
ALCAM-204ENST00000470756 RAD54L2Q9Y4B4 1467 aa32.39■■■□□ 2.78
ALCAM-204ENST00000470756 SOGA1O94964 1423 aa32.37■■■□□ 2.77
ALCAM-204ENST00000470756 IFT140Q96RY7 1462 aa32.32■■■□□ 2.77
ALCAM-204ENST00000470756 TARBP1Q13395 1621 aaKnown RBP32.28■■■□□ 2.76
ALCAM-204ENST00000470756 LOC105371045A0A1W2PR82 267 aa32.22■■■□□ 2.75
ALCAM-204ENST00000470756 ZNF608Q9ULD9 1512 aaPredicted RBP32.2■■■□□ 2.74
ALCAM-204ENST00000470756 WDR97A6NE52 1622 aa32.18■■■□□ 2.74
ALCAM-204ENST00000470756 ABCA10Q8WWZ4 1543 aa32.18■■■□□ 2.74
ALCAM-204ENST00000470756 TDRD9Q8NDG6 1382 aaKnown RBP32.16■■■□□ 2.74
ALCAM-204ENST00000470756 AQRO60306 1485 aaKnown RBP eCLIP32.11■■■□□ 2.73
ALCAM-204ENST00000470756 EIF4G3O43432 1585 aaKnown RBP32.09■■■□□ 2.73
ALCAM-204ENST00000470756 ABCA5Q8WWZ7 1642 aa32.01■■■□□ 2.72
ALCAM-204ENST00000470756 GAPVD1Q14C86 1478 aa32.01■■■□□ 2.71
ALCAM-204ENST00000470756 KIF27Q86VH2 1401 aa32■■■□□ 2.71
ALCAM-204ENST00000470756 RUSC2Q8N2Y8 1516 aa31.99■■■□□ 2.71
ALCAM-204ENST00000470756 FAM9AQ8IZU1 332 aaPredicted RBP31.95■■■□□ 2.71
ALCAM-204ENST00000470756 PBRM1Q86U86 1689 aa31.94■■■□□ 2.7
ALCAM-204ENST00000470756 GRIN2BQ13224 1484 aa31.89■■■□□ 2.7
ALCAM-204ENST00000470756 EEA1Q15075 1411 aa31.83■■■□□ 2.69
ALCAM-204ENST00000470756 SNAPC4Q5SXM2 1469 aa31.82■■■□□ 2.68
ALCAM-204ENST00000470756 ERICH3Q5RHP9 1530 aa31.8■■■□□ 2.68
ALCAM-204ENST00000470756 IGF1RP08069 1367 aa31.77■■■□□ 2.68
ALCAM-204ENST00000470756 MAGI1Q96QZ7 1491 aaPredicted RBP31.72■■■□□ 2.67
ALCAM-204ENST00000470756 CSRNP3Q8WYN3 585 aa31.71■■■□□ 2.67
ALCAM-204ENST00000470756 FBLN2P98095 1184 aa31.7■■■□□ 2.67
ALCAM-204ENST00000470756 ADAMTS12P58397 1594 aa31.68■■■□□ 2.66
ALCAM-204ENST00000470756 CUL7Q14999 1698 aa31.66■■■□□ 2.66
ALCAM-204ENST00000470756 CARMIL1Q5VZK9 1371 aa31.63■■■□□ 2.65
ALCAM-204ENST00000470756 FHAD1B1AJZ9 1412 aa31.63■■■□□ 2.65
ALCAM-204ENST00000470756 CHMP7Q8WUX9 453 aaPredicted RBP31.63■■■□□ 2.65
ALCAM-204ENST00000470756 SYNJ2O15056 1496 aa31.61■■■□□ 2.65
ALCAM-204ENST00000470756 CHD1O14646 1710 aa31.6■■■□□ 2.65
ALCAM-204ENST00000470756 EHMT2Q96KQ7 1210 aa31.57■■■□□ 2.64
ALCAM-204ENST00000470756 PRXQ9BXM0 1461 aa31.51■■■□□ 2.63
ALCAM-204ENST00000470756 RAPGEF2Q9Y4G8 1499 aa31.51■■■□□ 2.63
ALCAM-204ENST00000470756 GRIN2AQ12879 1464 aa31.49■■■□□ 2.63
ALCAM-204ENST00000470756 KIF21BO75037 1637 aa31.42■■■□□ 2.62
ALCAM-204ENST00000470756 TNIKQ9UKE5 1360 aa31.39■■■□□ 2.61
ALCAM-204ENST00000470756 GOLGA3Q08378 1498 aa31.38■■■□□ 2.61
ALCAM-204ENST00000470756 PCGF6Q9BYE7 350 aa31.35■■■□□ 2.61
ALCAM-204ENST00000470756 OSCARQ8IYS5 282 aa31.34■■■□□ 2.61
Retrieved 100 of 20,778 RNA–protein pairs in 128 ms