RNA–Protein interactions for RNA: ENST00000470715.1

GTF2IRD1-204, Transcript of GTF2I repeat domain containing 1, humanhuman

TSL 3

Gene GTF2IRD1, Length 824 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2IRD1-204ENST00000470715 NISCHQ9Y2I1 1504 aa25.64■■□□□ 1.7
GTF2IRD1-204ENST00000470715 ABCC9O60706 1549 aa23.45■■□□□ 1.34
GTF2IRD1-204ENST00000470715 CCDC180Q9P1Z9 1646 aa23.15■■□□□ 1.3
GTF2IRD1-204ENST00000470715 DNAJC5BQ9UF47 199 aa22.33■■□□□ 1.17
GTF2IRD1-204ENST00000470715 RB1CC1Q8TDY2 1594 aa22.14■■□□□ 1.13
GTF2IRD1-204ENST00000470715 NACADO15069 1562 aa21.9■■□□□ 1.1
GTF2IRD1-204ENST00000470715 UNC13AQ9UPW8 1703 aa21.86■■□□□ 1.09
GTF2IRD1-204ENST00000470715 PABPN1Q86U42 306 aaKnown RBP eCLIP21.8■■□□□ 1.08
GTF2IRD1-204ENST00000470715 DCAF8L2P0C7V8 631 aa21.78■■□□□ 1.08
GTF2IRD1-204ENST00000470715 BICRAQ9NZM4 1560 aa21.61■■□□□ 1.05
GTF2IRD1-204ENST00000470715 MYO15BQ96JP2 1530 aa21.46■■□□□ 1.03
GTF2IRD1-204ENST00000470715 CC2D2AQ9P2K1 1620 aa21.19■□□□□ 0.98
GTF2IRD1-204ENST00000470715 ZCCHC6Q5VYS8 1495 aaKnown RBP21.19■□□□□ 0.98
GTF2IRD1-204ENST00000470715 SCRIBQ14160 1630 aa21.12■□□□□ 0.97
GTF2IRD1-204ENST00000470715 CECR2Q9BXF3 1484 aa21.12■□□□□ 0.97
GTF2IRD1-204ENST00000470715 DCAF1Q9Y4B6 1507 aa21.11■□□□□ 0.97
GTF2IRD1-204ENST00000470715 SHROOM4Q9ULL8 1493 aa21.08■□□□□ 0.97
GTF2IRD1-204ENST00000470715 EIF4G1Q04637 1599 aaKnown RBP21.05■□□□□ 0.96
GTF2IRD1-204ENST00000470715 DNAJC5Q9H3Z4 198 aa20.6■□□□□ 0.89
GTF2IRD1-204ENST00000470715 CUX2O14529 1486 aa20.24■□□□□ 0.83
GTF2IRD1-204ENST00000470715 NCAPD3P42695 1498 aa20.23■□□□□ 0.83
GTF2IRD1-204ENST00000470715 ERCC6Q03468 1493 aa20.19■□□□□ 0.82
GTF2IRD1-204ENST00000470715 ATAD2BQ9ULI0 1458 aa20.16■□□□□ 0.82
GTF2IRD1-204ENST00000470715 NESP48681 1621 aa20.11■□□□□ 0.81
GTF2IRD1-204ENST00000470715 SMARCA4P51532 1647 aa20.1■□□□□ 0.81
GTF2IRD1-204ENST00000470715 HMGXB3Q12766 1538 aa20.05■□□□□ 0.8
GTF2IRD1-204ENST00000470715 SMARCA2P51531 1590 aa20.04■□□□□ 0.8
GTF2IRD1-204ENST00000470715 THOC2Q8NI27 1593 aaKnown RBP19.95■□□□□ 0.78
GTF2IRD1-204ENST00000470715 BAZ1BQ9UIG0 1483 aaKnown RBP19.92■□□□□ 0.78
GTF2IRD1-204ENST00000470715 KIF21AQ7Z4S6 1674 aa19.89■□□□□ 0.77
GTF2IRD1-204ENST00000470715 BAZ1AQ9NRL2 1556 aaPredicted RBP19.89■□□□□ 0.77
GTF2IRD1-204ENST00000470715 PEG3Q9GZU2 1588 aa19.87■□□□□ 0.77
GTF2IRD1-204ENST00000470715 LAMC3Q9Y6N6 1575 aa19.83■□□□□ 0.77
GTF2IRD1-204ENST00000470715 MROH2BQ7Z745 1585 aa19.81■□□□□ 0.76
GTF2IRD1-204ENST00000470715 PDS5BQ9NTI5 1447 aa19.67■□□□□ 0.74
GTF2IRD1-204ENST00000470715 WIZO95785 1651 aa19.62■□□□□ 0.73
GTF2IRD1-204ENST00000470715 TRIM41Q8WV44 630 aa19.61■□□□□ 0.73
GTF2IRD1-204ENST00000470715 CADPSQ9ULU8 1353 aa19.59■□□□□ 0.73
GTF2IRD1-204ENST00000470715 MRC2Q9UBG0 1479 aa19.56■□□□□ 0.72
GTF2IRD1-204ENST00000470715 WDR62O43379 1518 aa19.55■□□□□ 0.72
GTF2IRD1-204ENST00000470715 CEP164Q9UPV0 1460 aa19.41■□□□□ 0.7
GTF2IRD1-204ENST00000470715 FANCD2Q9BXW9 1451 aa19.39■□□□□ 0.69
GTF2IRD1-204ENST00000470715 CFTRP13569 1480 aa19.32■□□□□ 0.68
GTF2IRD1-204ENST00000470715 URB2Q14146 1524 aaKnown RBP19.3■□□□□ 0.68
GTF2IRD1-204ENST00000470715 OSCARQ8IYS5 282 aa19.27■□□□□ 0.68
GTF2IRD1-204ENST00000470715 RSF1Q96T23 1441 aaPredicted RBP19.25■□□□□ 0.67
GTF2IRD1-204ENST00000470715 TOP2AP11388 1531 aaKnown RBP19.23■□□□□ 0.67
GTF2IRD1-204ENST00000470715 PRDM2Q13029 1718 aa19.22■□□□□ 0.67
GTF2IRD1-204ENST00000470715 RIMBP3CA6NJZ7 1639 aa19.18■□□□□ 0.66
GTF2IRD1-204ENST00000470715 RIMBP3BA6NNM3 1639 aa19.18■□□□□ 0.66
GTF2IRD1-204ENST00000470715 RIMBP3Q9UFD9 1639 aa19.18■□□□□ 0.66
GTF2IRD1-204ENST00000470715 ZNF608Q9ULD9 1512 aaPredicted RBP19.12■□□□□ 0.65
GTF2IRD1-204ENST00000470715 CCDC88BA6NC98 1476 aa19.05■□□□□ 0.64
GTF2IRD1-204ENST00000470715 ARHGEF11O15085 1522 aa19.03■□□□□ 0.64
GTF2IRD1-204ENST00000470715 IFT140Q96RY7 1462 aa19.03■□□□□ 0.64
GTF2IRD1-204ENST00000470715 TOPBP1Q92547 1522 aa19.01■□□□□ 0.63
GTF2IRD1-204ENST00000470715 EIF4G3O43432 1585 aaKnown RBP18.99■□□□□ 0.63
GTF2IRD1-204ENST00000470715 CHD1O14646 1710 aa18.98■□□□□ 0.63
GTF2IRD1-204ENST00000470715 TARBP1Q13395 1621 aaKnown RBP18.92■□□□□ 0.62
GTF2IRD1-204ENST00000470715 DNMBPQ6XZF7 1577 aa18.91■□□□□ 0.62
GTF2IRD1-204ENST00000470715 AQRO60306 1485 aaKnown RBP eCLIP18.9■□□□□ 0.628e-7■■■□□ 16.1
GTF2IRD1-204ENST00000470715 CYB5RLQ6IPT4 315 aa18.89■□□□□ 0.61
GTF2IRD1-204ENST00000470715 ABCC8Q09428 1581 aa18.86■□□□□ 0.61
GTF2IRD1-204ENST00000470715 ARAP1Q96P48 1450 aa18.84■□□□□ 0.61
GTF2IRD1-204ENST00000470715 POLA1P09884 1462 aaPredicted RBP18.8■□□□□ 0.6
GTF2IRD1-204ENST00000470715 RAD54L2Q9Y4B4 1467 aa18.78■□□□□ 0.6
GTF2IRD1-204ENST00000470715 FBLN2P98095 1184 aa18.78■□□□□ 0.6
GTF2IRD1-204ENST00000470715 TRHP20396 242 aaPredicted RBP18.75■□□□□ 0.59
GTF2IRD1-204ENST00000470715 TDRD9Q8NDG6 1382 aaKnown RBP18.71■□□□□ 0.59
GTF2IRD1-204ENST00000470715 SOGA1O94964 1423 aa18.68■□□□□ 0.58
GTF2IRD1-204ENST00000470715 SNAPC4Q5SXM2 1469 aa18.67■□□□□ 0.58
GTF2IRD1-204ENST00000470715 CLASP1Q7Z460 1538 aa18.67■□□□□ 0.58
GTF2IRD1-204ENST00000470715 FGD5Q6ZNL6 1462 aa18.65■□□□□ 0.58
GTF2IRD1-204ENST00000470715 CUX1P39880 1505 aa18.61■□□□□ 0.57
GTF2IRD1-204ENST00000470715 WDR97A6NE52 1622 aa18.6■□□□□ 0.57
GTF2IRD1-204ENST00000470715 SYNJ1O43426 1573 aa18.58■□□□□ 0.56
GTF2IRD1-204ENST00000470715 PBRM1Q86U86 1689 aa18.57■□□□□ 0.56
GTF2IRD1-204ENST00000470715 CHMP7Q8WUX9 453 aaPredicted RBP18.56■□□□□ 0.56
GTF2IRD1-204ENST00000470715 MAGI1Q96QZ7 1491 aaPredicted RBP18.55■□□□□ 0.56
GTF2IRD1-204ENST00000470715 GRIN2BQ13224 1484 aa18.53■□□□□ 0.56
GTF2IRD1-204ENST00000470715 SYNJ2O15056 1496 aa18.51■□□□□ 0.55
GTF2IRD1-204ENST00000470715 GAPVD1Q14C86 1478 aa18.46■□□□□ 0.54
GTF2IRD1-204ENST00000470715 ERCC6L2Q5T890 1561 aa18.44■□□□□ 0.54
GTF2IRD1-204ENST00000470715 ABCA5Q8WWZ7 1642 aa18.44■□□□□ 0.54
GTF2IRD1-204ENST00000470715 ABCA10Q8WWZ4 1543 aa18.39■□□□□ 0.53
GTF2IRD1-204ENST00000470715 AEBP2Q6ZN18 517 aaPredicted RBP18.37■□□□□ 0.53
GTF2IRD1-204ENST00000470715 CEP170Q5SW79 1584 aa18.34■□□□□ 0.53
GTF2IRD1-204ENST00000470715 GRIN2AQ12879 1464 aa18.33■□□□□ 0.52
GTF2IRD1-204ENST00000470715 ADAMTS12P58397 1594 aa18.3■□□□□ 0.52
GTF2IRD1-204ENST00000470715 KIF13AQ9H1H9 1805 aa18.29■□□□□ 0.52
GTF2IRD1-204ENST00000470715 SHROOM2Q13796 1616 aa18.27■□□□□ 0.52
GTF2IRD1-204ENST00000470715 NUP160Q12769 1436 aa18.26■□□□□ 0.51
GTF2IRD1-204ENST00000470715 BIVM-ERCC5R4GMW8 1640 aa18.25■□□□□ 0.51
GTF2IRD1-204ENST00000470715 TOP2BQ02880 1626 aa18.22■□□□□ 0.51
GTF2IRD1-204ENST00000470715 WRNQ14191 1432 aaPredicted RBP eCLIP18.21■□□□□ 0.51
GTF2IRD1-204ENST00000470715 SUPT5HO00267 1087 aaKnown RBP18.19■□□□□ 0.5
GTF2IRD1-204ENST00000470715 FHAD1B1AJZ9 1412 aa18.17■□□□□ 0.5
GTF2IRD1-204ENST00000470715 ERICH3Q5RHP9 1530 aa18.14■□□□□ 0.49
GTF2IRD1-204ENST00000470715 PRG4Q92954 1404 aaPredicted RBP18.12■□□□□ 0.49
GTF2IRD1-204ENST00000470715 JPH4Q96JJ6 628 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms