RNA–Protein interactions for RNA: ENST00000470626.1

ZCCHC11-208, Transcript of Terminal uridylyltransferase 4, humanhuman

TSL 3

Gene ZCCHC11, Length 883 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZCCHC11-208ENST00000470626 NISCHQ9Y2I1 1504 aa47.05■■■■■ 5.12
ZCCHC11-208ENST00000470626 CCDC180Q9P1Z9 1646 aa42.33■■■■■ 4.37
ZCCHC11-208ENST00000470626 ABCC9O60706 1549 aa42.21■■■■■ 4.35
ZCCHC11-208ENST00000470626 RB1CC1Q8TDY2 1594 aa40.21■■■■■ 4.03
ZCCHC11-208ENST00000470626 NACADO15069 1562 aa39.92■■■■□ 3.98
ZCCHC11-208ENST00000470626 DCAF8L2P0C7V8 631 aa39.58■■■■□ 3.93
ZCCHC11-208ENST00000470626 DNAJC5BQ9UF47 199 aa39.53■■■■□ 3.92
ZCCHC11-208ENST00000470626 UNC13AQ9UPW8 1703 aa39.51■■■■□ 3.91
ZCCHC11-208ENST00000470626 MYO15BQ96JP2 1530 aa39.35■■■■□ 3.89
ZCCHC11-208ENST00000470626 PABPN1Q86U42 306 aaKnown RBP eCLIP39.23■■■■□ 3.87
ZCCHC11-208ENST00000470626 BICRAQ9NZM4 1560 aa39.08■■■■□ 3.85
ZCCHC11-208ENST00000470626 ZCCHC6Q5VYS8 1495 aaKnown RBP39.03■■■■□ 3.84
ZCCHC11-208ENST00000470626 DCAF1Q9Y4B6 1507 aa38.87■■■■□ 3.81
ZCCHC11-208ENST00000470626 SCRIBQ14160 1630 aa38.56■■■■□ 3.76
ZCCHC11-208ENST00000470626 SHROOM4Q9ULL8 1493 aa38.47■■■■□ 3.75
ZCCHC11-208ENST00000470626 CC2D2AQ9P2K1 1620 aa38.2■■■■□ 3.7
ZCCHC11-208ENST00000470626 EIF4G1Q04637 1599 aaKnown RBP38.1■■■■□ 3.69
ZCCHC11-208ENST00000470626 CECR2Q9BXF3 1484 aa38.01■■■■□ 3.67
ZCCHC11-208ENST00000470626 NCAPD3P42695 1498 aa36.8■■■■□ 3.48
ZCCHC11-208ENST00000470626 SMARCA4P51532 1647 aa36.77■■■■□ 3.48
ZCCHC11-208ENST00000470626 ATAD2BQ9ULI0 1458 aa36.72■■■■□ 3.47
ZCCHC11-208ENST00000470626 SMARCA2P51531 1590 aa36.64■■■■□ 3.46
ZCCHC11-208ENST00000470626 HMGXB3Q12766 1538 aa36.6■■■■□ 3.45
ZCCHC11-208ENST00000470626 BAZ1AQ9NRL2 1556 aaPredicted RBP36.53■■■■□ 3.44
ZCCHC11-208ENST00000470626 ERCC6Q03468 1493 aa36.42■■■■□ 3.42
ZCCHC11-208ENST00000470626 PEG3Q9GZU2 1588 aa36.39■■■■□ 3.42
ZCCHC11-208ENST00000470626 BAZ1BQ9UIG0 1483 aaKnown RBP36.38■■■■□ 3.41
ZCCHC11-208ENST00000470626 CUX2O14529 1486 aa36.36■■■■□ 3.41
ZCCHC11-208ENST00000470626 NESP48681 1621 aa36.3■■■■□ 3.4
ZCCHC11-208ENST00000470626 MROH2BQ7Z745 1585 aa36.28■■■■□ 3.4
ZCCHC11-208ENST00000470626 DNAJC5Q9H3Z4 198 aa36.24■■■■□ 3.39
ZCCHC11-208ENST00000470626 LAMC3Q9Y6N6 1575 aa36.04■■■■□ 3.36
ZCCHC11-208ENST00000470626 THOC2Q8NI27 1593 aaKnown RBP35.99■■■■□ 3.35
ZCCHC11-208ENST00000470626 KIF21AQ7Z4S6 1674 aa35.94■■■■□ 3.34
ZCCHC11-208ENST00000470626 WIZO95785 1651 aa35.91■■■■□ 3.34
ZCCHC11-208ENST00000470626 PDS5BQ9NTI5 1447 aa35.74■■■■□ 3.31
ZCCHC11-208ENST00000470626 CADPSQ9ULU8 1353 aa35.66■■■■□ 3.3
ZCCHC11-208ENST00000470626 MRC2Q9UBG0 1479 aa35.49■■■■□ 3.27
ZCCHC11-208ENST00000470626 RSF1Q96T23 1441 aaPredicted RBP35.48■■■■□ 3.27
ZCCHC11-208ENST00000470626 WDR62O43379 1518 aa35.45■■■■□ 3.27
ZCCHC11-208ENST00000470626 TOP2AP11388 1531 aaKnown RBP35.41■■■■□ 3.26
ZCCHC11-208ENST00000470626 CEP164Q9UPV0 1460 aa35.35■■■■□ 3.25
ZCCHC11-208ENST00000470626 FANCD2Q9BXW9 1451 aa35.31■■■■□ 3.24
ZCCHC11-208ENST00000470626 CFTRP13569 1480 aa35.3■■■■□ 3.24
ZCCHC11-208ENST00000470626 PRDM2Q13029 1718 aa35.18■■■■□ 3.22
ZCCHC11-208ENST00000470626 URB2Q14146 1524 aaKnown RBP35.06■■■■□ 3.2
ZCCHC11-208ENST00000470626 CCDC88BA6NC98 1476 aa34.97■■■■□ 3.19
ZCCHC11-208ENST00000470626 TRIM41Q8WV44 630 aa34.68■■■■□ 3.14
ZCCHC11-208ENST00000470626 TOPBP1Q92547 1522 aa34.67■■■■□ 3.14
ZCCHC11-208ENST00000470626 IFT140Q96RY7 1462 aa34.63■■■■□ 3.13
ZCCHC11-208ENST00000470626 ZNF608Q9ULD9 1512 aaPredicted RBP34.62■■■■□ 3.13
ZCCHC11-208ENST00000470626 OSCARQ8IYS5 282 aa34.6■■■■□ 3.13
ZCCHC11-208ENST00000470626 DNMBPQ6XZF7 1577 aa34.57■■■■□ 3.13
ZCCHC11-208ENST00000470626 ABCC8Q09428 1581 aa34.53■■■■□ 3.12
ZCCHC11-208ENST00000470626 EIF4G3O43432 1585 aaKnown RBP34.49■■■■□ 3.11
ZCCHC11-208ENST00000470626 TARBP1Q13395 1621 aaKnown RBP34.41■■■■□ 3.1
ZCCHC11-208ENST00000470626 RIMBP3CA6NJZ7 1639 aa34.34■■■■□ 3.09
ZCCHC11-208ENST00000470626 RIMBP3BA6NNM3 1639 aa34.34■■■■□ 3.09
ZCCHC11-208ENST00000470626 RIMBP3Q9UFD9 1639 aa34.34■■■■□ 3.09
ZCCHC11-208ENST00000470626 POLA1P09884 1462 aaPredicted RBP34.31■■■■□ 3.08
ZCCHC11-208ENST00000470626 CHD1O14646 1710 aa34.3■■■■□ 3.08
ZCCHC11-208ENST00000470626 AQRO60306 1485 aaKnown RBP eCLIP34.27■■■■□ 3.081e-8■■■■■ 34.3
ZCCHC11-208ENST00000470626 RAD54L2Q9Y4B4 1467 aa34.18■■■■□ 3.06
ZCCHC11-208ENST00000470626 ARHGEF11O15085 1522 aa34.18■■■■□ 3.06
ZCCHC11-208ENST00000470626 FGD5Q6ZNL6 1462 aa34.1■■■■□ 3.05
ZCCHC11-208ENST00000470626 CUX1P39880 1505 aa34.09■■■■□ 3.05
ZCCHC11-208ENST00000470626 SOGA1O94964 1423 aa34.09■■■■□ 3.05
ZCCHC11-208ENST00000470626 WDR97A6NE52 1622 aa34.04■■■■□ 3.04
ZCCHC11-208ENST00000470626 TDRD9Q8NDG6 1382 aaKnown RBP34.03■■■■□ 3.04
ZCCHC11-208ENST00000470626 SUPT5HO00267 1087 aaKnown RBP34■■■■□ 3.03
ZCCHC11-208ENST00000470626 FBLN2P98095 1184 aa33.97■■■■□ 3.03
ZCCHC11-208ENST00000470626 SNAPC4Q5SXM2 1469 aa33.95■■■■□ 3.03
ZCCHC11-208ENST00000470626 PBRM1Q86U86 1689 aa33.87■■■■□ 3.01
ZCCHC11-208ENST00000470626 ARAP1Q96P48 1450 aa33.85■■■■□ 3.01
ZCCHC11-208ENST00000470626 MAGI1Q96QZ7 1491 aaPredicted RBP33.84■■■■□ 3.01
ZCCHC11-208ENST00000470626 GRIN2BQ13224 1484 aa33.82■■■■□ 3.01
ZCCHC11-208ENST00000470626 CLASP1Q7Z460 1538 aa33.81■■■■□ 3
ZCCHC11-208ENST00000470626 CYB5RLQ6IPT4 315 aa33.81■■■■□ 3
ZCCHC11-208ENST00000470626 SYNJ1O43426 1573 aa33.77■■■■□ 3
ZCCHC11-208ENST00000470626 ABCA5Q8WWZ7 1642 aa33.74■■■□□ 2.99
ZCCHC11-208ENST00000470626 SYNJ2O15056 1496 aa33.72■■■□□ 2.99
ZCCHC11-208ENST00000470626 GAPVD1Q14C86 1478 aa33.71■■■□□ 2.99
ZCCHC11-208ENST00000470626 ABCA10Q8WWZ4 1543 aa33.71■■■□□ 2.99
ZCCHC11-208ENST00000470626 CHMP7Q8WUX9 453 aaPredicted RBP33.71■■■□□ 2.99
ZCCHC11-208ENST00000470626 BIVM-ERCC5R4GMW8 1640 aa33.61■■■□□ 2.97
ZCCHC11-208ENST00000470626 TOP2BQ02880 1626 aa33.57■■■□□ 2.96
ZCCHC11-208ENST00000470626 WRNQ14191 1432 aaPredicted RBP eCLIP33.52■■■□□ 2.96
ZCCHC11-208ENST00000470626 ADAMTS12P58397 1594 aa33.47■■■□□ 2.95
ZCCHC11-208ENST00000470626 TRHP20396 242 aaPredicted RBP33.42■■■□□ 2.94
ZCCHC11-208ENST00000470626 GRIN2AQ12879 1464 aa33.42■■■□□ 2.94
ZCCHC11-208ENST00000470626 CEP170Q5SW79 1584 aa33.36■■■□□ 2.93
ZCCHC11-208ENST00000470626 ERCC6L2Q5T890 1561 aa33.31■■■□□ 2.92
ZCCHC11-208ENST00000470626 NUP160Q12769 1436 aa33.29■■■□□ 2.92
ZCCHC11-208ENST00000470626 ERICH3Q5RHP9 1530 aa33.28■■■□□ 2.92
ZCCHC11-208ENST00000470626 FHAD1B1AJZ9 1412 aa33.27■■■□□ 2.92
ZCCHC11-208ENST00000470626 SHROOM2Q13796 1616 aa33.23■■■□□ 2.91
ZCCHC11-208ENST00000470626 RUSC2Q8N2Y8 1516 aa33.01■■■□□ 2.87
ZCCHC11-208ENST00000470626 PRG4Q92954 1404 aaPredicted RBP32.94■■■□□ 2.86
ZCCHC11-208ENST00000470626 CUL7Q14999 1698 aa32.87■■■□□ 2.85
ZCCHC11-208ENST00000470626 JPH4Q96JJ6 628 aa32.86■■■□□ 2.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms