RNA–Protein interactions for RNA: ENST00000470620.1

KATNA1-206, Transcript of katanin catalytic subunit A1, humanhuman

TSL 3

Gene KATNA1, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KATNA1-206ENST00000470620 NISCHQ9Y2I1 1504 aa37.23■■■■□ 3.55
KATNA1-206ENST00000470620 CCDC180Q9P1Z9 1646 aa33.35■■■□□ 2.93
KATNA1-206ENST00000470620 ABCC9O60706 1549 aa33.12■■■□□ 2.89
KATNA1-206ENST00000470620 RB1CC1Q8TDY2 1594 aa31.69■■■□□ 2.66
KATNA1-206ENST00000470620 NACADO15069 1562 aa31.56■■■□□ 2.64
KATNA1-206ENST00000470620 DCAF8L2P0C7V8 631 aa31.33■■■□□ 2.61
KATNA1-206ENST00000470620 MYO15BQ96JP2 1530 aa31.25■■■□□ 2.59
KATNA1-206ENST00000470620 DNAJC5BQ9UF47 199 aa31.01■■■□□ 2.55
KATNA1-206ENST00000470620 UNC13AQ9UPW8 1703 aa30.88■■■□□ 2.53
KATNA1-206ENST00000470620 PABPN1Q86U42 306 aaKnown RBP eCLIP30.88■■■□□ 2.53
KATNA1-206ENST00000470620 DCAF1Q9Y4B6 1507 aa30.86■■■□□ 2.53
KATNA1-206ENST00000470620 ZCCHC6Q5VYS8 1495 aaKnown RBP30.85■■■□□ 2.53
KATNA1-206ENST00000470620 BICRAQ9NZM4 1560 aa30.71■■■□□ 2.51
KATNA1-206ENST00000470620 SHROOM4Q9ULL8 1493 aa30.46■■■□□ 2.47
KATNA1-206ENST00000470620 SCRIBQ14160 1630 aa30.25■■■□□ 2.43
KATNA1-206ENST00000470620 CC2D2AQ9P2K1 1620 aa29.96■■■□□ 2.39
KATNA1-206ENST00000470620 EIF4G1Q04637 1599 aaKnown RBP29.94■■■□□ 2.38
KATNA1-206ENST00000470620 CECR2Q9BXF3 1484 aa29.87■■■□□ 2.37
KATNA1-206ENST00000470620 NCAPD3P42695 1498 aa29.16■■■□□ 2.26
KATNA1-206ENST00000470620 ATAD2BQ9ULI0 1458 aa29.01■■■□□ 2.23
KATNA1-206ENST00000470620 SMARCA4P51532 1647 aa28.97■■■□□ 2.23
KATNA1-206ENST00000470620 SMARCA2P51531 1590 aa28.96■■■□□ 2.23
KATNA1-206ENST00000470620 BAZ1AQ9NRL2 1556 aaPredicted RBP28.91■■■□□ 2.22
KATNA1-206ENST00000470620 HMGXB3Q12766 1538 aa28.89■■■□□ 2.21
KATNA1-206ENST00000470620 PEG3Q9GZU2 1588 aa28.78■■■□□ 2.2
KATNA1-206ENST00000470620 BAZ1BQ9UIG0 1483 aaKnown RBP28.71■■■□□ 2.19
KATNA1-206ENST00000470620 ERCC6Q03468 1493 aa28.63■■■□□ 2.17
KATNA1-206ENST00000470620 MROH2BQ7Z745 1585 aa28.62■■■□□ 2.17
KATNA1-206ENST00000470620 CUX2O14529 1486 aa28.62■■■□□ 2.17
KATNA1-206ENST00000470620 DNAJC5Q9H3Z4 198 aa28.5■■■□□ 2.15
KATNA1-206ENST00000470620 NESP48681 1621 aa28.47■■■□□ 2.15
KATNA1-206ENST00000470620 LAMC3Q9Y6N6 1575 aa28.43■■■□□ 2.14
KATNA1-206ENST00000470620 PDS5BQ9NTI5 1447 aa28.29■■■□□ 2.12
KATNA1-206ENST00000470620 WIZO95785 1651 aa28.26■■■□□ 2.12
KATNA1-206ENST00000470620 CADPSQ9ULU8 1353 aa28.25■■■□□ 2.11
KATNA1-206ENST00000470620 THOC2Q8NI27 1593 aaKnown RBP28.18■■■□□ 2.1
KATNA1-206ENST00000470620 RSF1Q96T23 1441 aaPredicted RBP28.14■■■□□ 2.1
KATNA1-206ENST00000470620 KIF21AQ7Z4S6 1674 aa28.1■■■□□ 2.09
KATNA1-206ENST00000470620 TOP2AP11388 1531 aaKnown RBP27.97■■■□□ 2.07
KATNA1-206ENST00000470620 MRC2Q9UBG0 1479 aa27.95■■■□□ 2.07
KATNA1-206ENST00000470620 CFTRP13569 1480 aa27.95■■■□□ 2.06
KATNA1-206ENST00000470620 WDR62O43379 1518 aa27.88■■■□□ 2.05
KATNA1-206ENST00000470620 CEP164Q9UPV0 1460 aa27.88■■■□□ 2.05
KATNA1-206ENST00000470620 FANCD2Q9BXW9 1451 aa27.86■■■□□ 2.05
KATNA1-206ENST00000470620 CCDC88BA6NC98 1476 aa27.67■■■□□ 2.02
KATNA1-206ENST00000470620 PRDM2Q13029 1718 aa27.61■■■□□ 2.01
KATNA1-206ENST00000470620 URB2Q14146 1524 aaKnown RBP27.58■■■□□ 2.01
KATNA1-206ENST00000470620 ABCC8Q09428 1581 aa27.43■■□□□ 1.98
KATNA1-206ENST00000470620 OSCARQ8IYS5 282 aa27.4■■□□□ 1.98
KATNA1-206ENST00000470620 IFT140Q96RY7 1462 aa27.36■■□□□ 1.97
KATNA1-206ENST00000470620 TOPBP1Q92547 1522 aa27.34■■□□□ 1.97
KATNA1-206ENST00000470620 DNMBPQ6XZF7 1577 aa27.25■■□□□ 1.95
KATNA1-206ENST00000470620 ZNF608Q9ULD9 1512 aaPredicted RBP27.2■■□□□ 1.94
KATNA1-206ENST00000470620 TRIM41Q8WV44 630 aa27.13■■□□□ 1.93
KATNA1-206ENST00000470620 TARBP1Q13395 1621 aaKnown RBP27.08■■□□□ 1.93
KATNA1-206ENST00000470620 POLA1P09884 1462 aaPredicted RBP27.06■■□□□ 1.92
KATNA1-206ENST00000470620 EIF4G3O43432 1585 aaKnown RBP27.04■■□□□ 1.92
KATNA1-206ENST00000470620 AQRO60306 1485 aaKnown RBP eCLIP27.01■■□□□ 1.914e-6■□□□□ 10.8
KATNA1-206ENST00000470620 SOGA1O94964 1423 aa27■■□□□ 1.91
KATNA1-206ENST00000470620 SUPT5HO00267 1087 aaKnown RBP26.94■■□□□ 1.9
KATNA1-206ENST00000470620 WDR97A6NE52 1622 aa26.92■■□□□ 1.9
KATNA1-206ENST00000470620 RAD54L2Q9Y4B4 1467 aa26.92■■□□□ 1.9
KATNA1-206ENST00000470620 FGD5Q6ZNL6 1462 aa26.89■■□□□ 1.9
KATNA1-206ENST00000470620 CUX1P39880 1505 aa26.88■■□□□ 1.89
KATNA1-206ENST00000470620 TDRD9Q8NDG6 1382 aaKnown RBP26.87■■□□□ 1.89
KATNA1-206ENST00000470620 RIMBP3CA6NJZ7 1639 aa26.86■■□□□ 1.89
KATNA1-206ENST00000470620 RIMBP3BA6NNM3 1639 aa26.86■■□□□ 1.89
KATNA1-206ENST00000470620 RIMBP3Q9UFD9 1639 aa26.86■■□□□ 1.89
KATNA1-206ENST00000470620 FBLN2P98095 1184 aa26.82■■□□□ 1.88
KATNA1-206ENST00000470620 ARHGEF11O15085 1522 aa26.81■■□□□ 1.88
KATNA1-206ENST00000470620 CHD1O14646 1710 aa26.81■■□□□ 1.88
KATNA1-206ENST00000470620 GRIN2BQ13224 1484 aa26.74■■□□□ 1.87
KATNA1-206ENST00000470620 MAGI1Q96QZ7 1491 aaPredicted RBP26.74■■□□□ 1.87
KATNA1-206ENST00000470620 CHMP7Q8WUX9 453 aaPredicted RBP26.72■■□□□ 1.87
KATNA1-206ENST00000470620 SNAPC4Q5SXM2 1469 aa26.71■■□□□ 1.87
KATNA1-206ENST00000470620 ABCA10Q8WWZ4 1543 aa26.67■■□□□ 1.86
KATNA1-206ENST00000470620 CYB5RLQ6IPT4 315 aa26.66■■□□□ 1.86
KATNA1-206ENST00000470620 GAPVD1Q14C86 1478 aa26.66■■□□□ 1.86
KATNA1-206ENST00000470620 SYNJ2O15056 1496 aa26.63■■□□□ 1.85
KATNA1-206ENST00000470620 WRNQ14191 1432 aaPredicted RBP eCLIP26.61■■□□□ 1.85
KATNA1-206ENST00000470620 SYNJ1O43426 1573 aa26.59■■□□□ 1.85
KATNA1-206ENST00000470620 CLASP1Q7Z460 1538 aa26.56■■□□□ 1.84
KATNA1-206ENST00000470620 ABCA5Q8WWZ7 1642 aa26.54■■□□□ 1.84
KATNA1-206ENST00000470620 PBRM1Q86U86 1689 aa26.54■■□□□ 1.84
KATNA1-206ENST00000470620 ARAP1Q96P48 1450 aa26.54■■□□□ 1.84
KATNA1-206ENST00000470620 TOP2BQ02880 1626 aa26.54■■□□□ 1.84
KATNA1-206ENST00000470620 BIVM-ERCC5R4GMW8 1640 aa26.52■■□□□ 1.84
KATNA1-206ENST00000470620 GRIN2AQ12879 1464 aa26.36■■□□□ 1.81
KATNA1-206ENST00000470620 ERICH3Q5RHP9 1530 aa26.35■■□□□ 1.81
KATNA1-206ENST00000470620 FHAD1B1AJZ9 1412 aa26.35■■□□□ 1.81
KATNA1-206ENST00000470620 NUP160Q12769 1436 aa26.31■■□□□ 1.8
KATNA1-206ENST00000470620 ADAMTS12P58397 1594 aa26.3■■□□□ 1.8
KATNA1-206ENST00000470620 TRHP20396 242 aaPredicted RBP26.3■■□□□ 1.8
KATNA1-206ENST00000470620 CEP170Q5SW79 1584 aa26.21■■□□□ 1.79
KATNA1-206ENST00000470620 SHROOM2Q13796 1616 aa26.14■■□□□ 1.78
KATNA1-206ENST00000470620 JPH4Q96JJ6 628 aa26.11■■□□□ 1.77
KATNA1-206ENST00000470620 ERCC6L2Q5T890 1561 aa26.07■■□□□ 1.76
KATNA1-206ENST00000470620 IGF1RP08069 1367 aa26.07■■□□□ 1.76
KATNA1-206ENST00000470620 KIF27Q86VH2 1401 aa26.06■■□□□ 1.76
KATNA1-206ENST00000470620 PRG4Q92954 1404 aaPredicted RBP26.02■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms