RNA–Protein interactions for RNA: ENST00000470602.2

CNIH3-202, Transcript of cornichon family AMPA receptor auxiliary protein 3, humanhuman

TSL 5

Gene CNIH3, Length 389 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH3-202ENST00000470602 NISCHQ9Y2I1 1504 aa12.78□□□□□ -0.36
CNIH3-202ENST00000470602 ABCC9O60706 1549 aa11.75□□□□□ -0.53
CNIH3-202ENST00000470602 CCDC180Q9P1Z9 1646 aa11.47□□□□□ -0.57
CNIH3-202ENST00000470602 DNAJC5BQ9UF47 199 aa11.22□□□□□ -0.61
CNIH3-202ENST00000470602 DCAF8L2P0C7V8 631 aa11.11□□□□□ -0.63
CNIH3-202ENST00000470602 RB1CC1Q8TDY2 1594 aa11.08□□□□□ -0.64
CNIH3-202ENST00000470602 PABPN1Q86U42 306 aaKnown RBP eCLIP11□□□□□ -0.65
CNIH3-202ENST00000470602 NACADO15069 1562 aa10.96□□□□□ -0.65
CNIH3-202ENST00000470602 MYO15BQ96JP2 1530 aa10.73□□□□□ -0.69
CNIH3-202ENST00000470602 UNC13AQ9UPW8 1703 aa10.72□□□□□ -0.69
CNIH3-202ENST00000470602 BICRAQ9NZM4 1560 aa10.7□□□□□ -0.7
CNIH3-202ENST00000470602 CECR2Q9BXF3 1484 aa10.6□□□□□ -0.71
CNIH3-202ENST00000470602 SHROOM4Q9ULL8 1493 aa10.56□□□□□ -0.72
CNIH3-202ENST00000470602 CC2D2AQ9P2K1 1620 aa10.55□□□□□ -0.72
CNIH3-202ENST00000470602 DCAF1Q9Y4B6 1507 aa10.53□□□□□ -0.72
CNIH3-202ENST00000470602 ZCCHC6Q5VYS8 1495 aaKnown RBP10.5□□□□□ -0.73
CNIH3-202ENST00000470602 DNAJC5Q9H3Z4 198 aa10.49□□□□□ -0.73
CNIH3-202ENST00000470602 EIF4G1Q04637 1599 aaKnown RBP10.48□□□□□ -0.73
CNIH3-202ENST00000470602 SCRIBQ14160 1630 aa10.47□□□□□ -0.73
CNIH3-202ENST00000470602 CUX2O14529 1486 aa10.18□□□□□ -0.78
CNIH3-202ENST00000470602 ERCC6Q03468 1493 aa10.18□□□□□ -0.78
CNIH3-202ENST00000470602 NCAPD3P42695 1498 aa10.15□□□□□ -0.78
CNIH3-202ENST00000470602 ATAD2BQ9ULI0 1458 aa10.07□□□□□ -0.8
CNIH3-202ENST00000470602 SMARCA2P51531 1590 aa10.03□□□□□ -0.8
CNIH3-202ENST00000470602 NESP48681 1621 aa10.02□□□□□ -0.81
CNIH3-202ENST00000470602 HMGXB3Q12766 1538 aa9.98□□□□□ -0.81
CNIH3-202ENST00000470602 TRIM41Q8WV44 630 aa9.98□□□□□ -0.81
CNIH3-202ENST00000470602 BAZ1BQ9UIG0 1483 aaKnown RBP9.98□□□□□ -0.81
CNIH3-202ENST00000470602 SMARCA4P51532 1647 aa9.96□□□□□ -0.81
CNIH3-202ENST00000470602 HRCP23327 699 aa9.95□□□□□ -0.82
CNIH3-202ENST00000470602 BAZ1AQ9NRL2 1556 aaPredicted RBP9.94□□□□□ -0.82
CNIH3-202ENST00000470602 PDS5BQ9NTI5 1447 aa9.94□□□□□ -0.82
CNIH3-202ENST00000470602 SUPT5HO00267 1087 aaKnown RBP9.93□□□□□ -0.82
CNIH3-202ENST00000470602 LAMC3Q9Y6N6 1575 aa9.92□□□□□ -0.82
CNIH3-202ENST00000470602 CADPSQ9ULU8 1353 aa9.88□□□□□ -0.83
CNIH3-202ENST00000470602 THOC2Q8NI27 1593 aaKnown RBP9.86□□□□□ -0.83
CNIH3-202ENST00000470602 PEG3Q9GZU2 1588 aa9.85□□□□□ -0.83
CNIH3-202ENST00000470602 MROH2BQ7Z745 1585 aa9.84□□□□□ -0.83
CNIH3-202ENST00000470602 OSCARQ8IYS5 282 aa9.84□□□□□ -0.83
CNIH3-202ENST00000470602 CHIC1Q5VXU3 224 aa9.82□□□□□ -0.84
CNIH3-202ENST00000470602 KIF21AQ7Z4S6 1674 aa9.81□□□□□ -0.84
CNIH3-202ENST00000470602 MRC2Q9UBG0 1479 aa9.8□□□□□ -0.84
CNIH3-202ENST00000470602 CEP164Q9UPV0 1460 aa9.73□□□□□ -0.85
CNIH3-202ENST00000470602 WDR62O43379 1518 aa9.73□□□□□ -0.85
CNIH3-202ENST00000470602 FANCD2Q9BXW9 1451 aa9.72□□□□□ -0.85
CNIH3-202ENST00000470602 WIZO95785 1651 aa9.71□□□□□ -0.86
CNIH3-202ENST00000470602 PCGF6Q9BYE7 350 aa9.68□□□□□ -0.86
CNIH3-202ENST00000470602 CFTRP13569 1480 aa9.66□□□□□ -0.86
CNIH3-202ENST00000470602 ZEB1P37275 1124 aaPredicted RBP9.66□□□□□ -0.86
CNIH3-202ENST00000470602 PELP1Q8IZL8 1130 aaKnown RBP9.65□□□□□ -0.86
CNIH3-202ENST00000470602 RSF1Q96T23 1441 aaPredicted RBP9.62□□□□□ -0.87
CNIH3-202ENST00000470602 URB2Q14146 1524 aaKnown RBP9.61□□□□□ -0.87
CNIH3-202ENST00000470602 TRIM26Q12899 539 aaPredicted RBP9.61□□□□□ -0.87
CNIH3-202ENST00000470602 CYB5RLQ6IPT4 315 aa9.61□□□□□ -0.87
CNIH3-202ENST00000470602 TRHP20396 242 aaPredicted RBP9.6□□□□□ -0.87
CNIH3-202ENST00000470602 FBLN2P98095 1184 aa9.57□□□□□ -0.88
CNIH3-202ENST00000470602 IFT140Q96RY7 1462 aa9.56□□□□□ -0.88
CNIH3-202ENST00000470602 TOP2AP11388 1531 aaKnown RBP9.56□□□□□ -0.88
CNIH3-202ENST00000470602 RIMBP3CA6NJZ7 1639 aa9.55□□□□□ -0.88
CNIH3-202ENST00000470602 RIMBP3BA6NNM3 1639 aa9.55□□□□□ -0.88
CNIH3-202ENST00000470602 RIMBP3Q9UFD9 1639 aa9.55□□□□□ -0.88
CNIH3-202ENST00000470602 ZNF608Q9ULD9 1512 aaPredicted RBP9.53□□□□□ -0.88
CNIH3-202ENST00000470602 ABCC8Q09428 1581 aa9.53□□□□□ -0.88
CNIH3-202ENST00000470602 ARHGEF11O15085 1522 aa9.51□□□□□ -0.89
CNIH3-202ENST00000470602 CCDC88BA6NC98 1476 aa9.51□□□□□ -0.89
CNIH3-202ENST00000470602 TOPBP1Q92547 1522 aa9.49□□□□□ -0.89
CNIH3-202ENST00000470602 AEBP2Q6ZN18 517 aaPredicted RBP9.48□□□□□ -0.89
CNIH3-202ENST00000470602 AQRO60306 1485 aaKnown RBP eCLIP9.47□□□□□ -0.89
CNIH3-202ENST00000470602 PPARGC1BQ86YN6 1023 aaKnown RBP9.46□□□□□ -0.9
CNIH3-202ENST00000470602 CHMP7Q8WUX9 453 aaPredicted RBP9.46□□□□□ -0.9
CNIH3-202ENST00000470602 PRDM2Q13029 1718 aa9.43□□□□□ -0.9
CNIH3-202ENST00000470602 SOGA1O94964 1423 aa9.42□□□□□ -0.9
CNIH3-202ENST00000470602 TDRD9Q8NDG6 1382 aaKnown RBP9.42□□□□□ -0.9
CNIH3-202ENST00000470602 EIF4G3O43432 1585 aaKnown RBP9.41□□□□□ -0.9
CNIH3-202ENST00000470602 DNMBPQ6XZF7 1577 aa9.41□□□□□ -0.9
CNIH3-202ENST00000470602 ARAP1Q96P48 1450 aa9.4□□□□□ -0.91
CNIH3-202ENST00000470602 LOC105371045A0A1W2PR82 267 aa9.39□□□□□ -0.91
CNIH3-202ENST00000470602 RAD54L2Q9Y4B4 1467 aa9.38□□□□□ -0.91
CNIH3-202ENST00000470602 TARBP1Q13395 1621 aaKnown RBP9.38□□□□□ -0.91
CNIH3-202ENST00000470602 CHD1O14646 1710 aa9.37□□□□□ -0.91
CNIH3-202ENST00000470602 POLA1P09884 1462 aaPredicted RBP9.37□□□□□ -0.91
CNIH3-202ENST00000470602 MYT1Q01538 1121 aa9.34□□□□□ -0.91
CNIH3-202ENST00000470602 SNAPC4Q5SXM2 1469 aa9.33□□□□□ -0.92
CNIH3-202ENST00000470602 GRIN2BQ13224 1484 aa9.31□□□□□ -0.92
CNIH3-202ENST00000470602 SYNJ1O43426 1573 aa9.31□□□□□ -0.92
CNIH3-202ENST00000470602 FGD5Q6ZNL6 1462 aa9.3□□□□□ -0.92
CNIH3-202ENST00000470602 MAGI1Q96QZ7 1491 aaPredicted RBP9.3□□□□□ -0.92
CNIH3-202ENST00000470602 SYNJ2O15056 1496 aa9.28□□□□□ -0.92
CNIH3-202ENST00000470602 WDR97A6NE52 1622 aa9.27□□□□□ -0.92
CNIH3-202ENST00000470602 CLASP1Q7Z460 1538 aa9.27□□□□□ -0.93
CNIH3-202ENST00000470602 GAPVD1Q14C86 1478 aa9.27□□□□□ -0.93
CNIH3-202ENST00000470602 CUX1P39880 1505 aa9.25□□□□□ -0.93
CNIH3-202ENST00000470602 NPM1P06748 294 aaKnown RBP eCLIP9.22□□□□□ -0.93
CNIH3-202ENST00000470602 CENPBP07199 599 aaPredicted RBP9.21□□□□□ -0.94
CNIH3-202ENST00000470602 WRNQ14191 1432 aaPredicted RBP eCLIP9.2□□□□□ -0.94
CNIH3-202ENST00000470602 JPH4Q96JJ6 628 aa9.19□□□□□ -0.94
CNIH3-202ENST00000470602 SCAF1Q9H7N4 1312 aaKnown RBP9.19□□□□□ -0.94
CNIH3-202ENST00000470602 ABCA10Q8WWZ4 1543 aa9.18□□□□□ -0.94
CNIH3-202ENST00000470602 EEA1Q15075 1411 aa9.17□□□□□ -0.94
CNIH3-202ENST00000470602 GRIN2AQ12879 1464 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms