RNA–Protein interactions for RNA: ENST00000470600.1

TGFBR3-206, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 2

Gene TGFBR3, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-206ENST00000470600 NISCHQ9Y2I1 1504 aa21.45■■□□□ 1.02
TGFBR3-206ENST00000470600 CCDC180Q9P1Z9 1646 aa19.05■□□□□ 0.64
TGFBR3-206ENST00000470600 ABCC9O60706 1549 aa18.34■□□□□ 0.53
TGFBR3-206ENST00000470600 ZCCHC6Q5VYS8 1495 aaKnown RBP17.95■□□□□ 0.46
TGFBR3-206ENST00000470600 MYO15BQ96JP2 1530 aa17.82■□□□□ 0.44
TGFBR3-206ENST00000470600 DCAF1Q9Y4B6 1507 aa17.81■□□□□ 0.44
TGFBR3-206ENST00000470600 NACADO15069 1562 aa17.79■□□□□ 0.44
TGFBR3-206ENST00000470600 AEBP2Q6ZN18 517 aaPredicted RBP17.75■□□□□ 0.43
TGFBR3-206ENST00000470600 RB1CC1Q8TDY2 1594 aa17.73■□□□□ 0.43
TGFBR3-206ENST00000470600 UNC13AQ9UPW8 1703 aa17.55■□□□□ 0.4
TGFBR3-206ENST00000470600 BICRAQ9NZM4 1560 aa17.41■□□□□ 0.38
TGFBR3-206ENST00000470600 DCAF8L2P0C7V8 631 aa17.4■□□□□ 0.38
TGFBR3-206ENST00000470600 SCRIBQ14160 1630 aa17.31■□□□□ 0.36
TGFBR3-206ENST00000470600 SHROOM4Q9ULL8 1493 aa17.11■□□□□ 0.33
TGFBR3-206ENST00000470600 PABPN1Q86U42 306 aaKnown RBP eCLIP17.08■□□□□ 0.32
TGFBR3-206ENST00000470600 EIF4G1Q04637 1599 aaKnown RBP16.81■□□□□ 0.28
TGFBR3-206ENST00000470600 DNAJC5BQ9UF47 199 aa16.81■□□□□ 0.28
TGFBR3-206ENST00000470600 CECR2Q9BXF3 1484 aa16.72■□□□□ 0.27
TGFBR3-206ENST00000470600 CHIC1Q5VXU3 224 aa16.69■□□□□ 0.26
TGFBR3-206ENST00000470600 CC2D2AQ9P2K1 1620 aa16.69■□□□□ 0.26
TGFBR3-206ENST00000470600 SMARCA4P51532 1647 aa16.63■□□□□ 0.25
TGFBR3-206ENST00000470600 MROH2BQ7Z745 1585 aa16.56■□□□□ 0.24
TGFBR3-206ENST00000470600 BAZ1AQ9NRL2 1556 aaPredicted RBP16.55■□□□□ 0.24
TGFBR3-206ENST00000470600 PEG3Q9GZU2 1588 aa16.54■□□□□ 0.24
TGFBR3-206ENST00000470600 ATAD2BQ9ULI0 1458 aa16.48■□□□□ 0.23
TGFBR3-206ENST00000470600 NCAPD3P42695 1498 aa16.43■□□□□ 0.22
TGFBR3-206ENST00000470600 HMGXB3Q12766 1538 aa16.4■□□□□ 0.22
TGFBR3-206ENST00000470600 SMARCA2P51531 1590 aa16.39■□□□□ 0.21
TGFBR3-206ENST00000470600 RSF1Q96T23 1441 aaPredicted RBP16.38■□□□□ 0.21
TGFBR3-206ENST00000470600 WIZO95785 1651 aa16.37■□□□□ 0.21
TGFBR3-206ENST00000470600 BAZ1BQ9UIG0 1483 aaKnown RBP16.24■□□□□ 0.19
TGFBR3-206ENST00000470600 TOP2AP11388 1531 aaKnown RBP16.19■□□□□ 0.18
TGFBR3-206ENST00000470600 NESP48681 1621 aa16.01■□□□□ 0.15
TGFBR3-206ENST00000470600 CCDC88BA6NC98 1476 aa15.97■□□□□ 0.15
TGFBR3-206ENST00000470600 LAMC3Q9Y6N6 1575 aa15.96■□□□□ 0.14
TGFBR3-206ENST00000470600 CFTRP13569 1480 aa15.91■□□□□ 0.14
TGFBR3-206ENST00000470600 CADPSQ9ULU8 1353 aa15.88■□□□□ 0.13
TGFBR3-206ENST00000470600 PRDM2Q13029 1718 aa15.87■□□□□ 0.13
TGFBR3-206ENST00000470600 KIF21AQ7Z4S6 1674 aa15.86■□□□□ 0.13
TGFBR3-206ENST00000470600 THOC2Q8NI27 1593 aaKnown RBP15.83■□□□□ 0.13
TGFBR3-206ENST00000470600 SUPT5HO00267 1087 aaKnown RBP15.76■□□□□ 0.11
TGFBR3-206ENST00000470600 FANCD2Q9BXW9 1451 aa15.71■□□□□ 0.11
TGFBR3-206ENST00000470600 PDS5BQ9NTI5 1447 aa15.71■□□□□ 0.11
TGFBR3-206ENST00000470600 WDR62O43379 1518 aa15.68■□□□□ 0.1
TGFBR3-206ENST00000470600 ERCC6Q03468 1493 aa15.66■□□□□ 0.1
TGFBR3-206ENST00000470600 CEP164Q9UPV0 1460 aa15.65■□□□□ 0.1
TGFBR3-206ENST00000470600 URB2Q14146 1524 aaKnown RBP15.65■□□□□ 0.1
TGFBR3-206ENST00000470600 MRC2Q9UBG0 1479 aa15.64■□□□□ 0.09
TGFBR3-206ENST00000470600 CUX2O14529 1486 aa15.6■□□□□ 0.09
TGFBR3-206ENST00000470600 DNMBPQ6XZF7 1577 aa15.53■□□□□ 0.08
TGFBR3-206ENST00000470600 TOPBP1Q92547 1522 aa15.53■□□□□ 0.08
TGFBR3-206ENST00000470600 CUX1P39880 1505 aa15.53■□□□□ 0.08
TGFBR3-206ENST00000470600 TARBP1Q13395 1621 aaKnown RBP15.45■□□□□ 0.06
TGFBR3-206ENST00000470600 BIVM-ERCC5R4GMW8 1640 aa15.45■□□□□ 0.06
TGFBR3-206ENST00000470600 SYNJ1O43426 1573 aa15.45■□□□□ 0.06
TGFBR3-206ENST00000470600 ABCC8Q09428 1581 aa15.45■□□□□ 0.06
TGFBR3-206ENST00000470600 POLA1P09884 1462 aaPredicted RBP15.42■□□□□ 0.06
TGFBR3-206ENST00000470600 WDR97A6NE52 1622 aa15.42■□□□□ 0.06
TGFBR3-206ENST00000470600 TOP2BQ02880 1626 aa15.4■□□□□ 0.06
TGFBR3-206ENST00000470600 FGD5Q6ZNL6 1462 aa15.37■□□□□ 0.05
TGFBR3-206ENST00000470600 WRNQ14191 1432 aaPredicted RBP eCLIP15.34■□□□□ 0.05
TGFBR3-206ENST00000470600 ZNF608Q9ULD9 1512 aaPredicted RBP15.34■□□□□ 0.05
TGFBR3-206ENST00000470600 IFT140Q96RY7 1462 aa15.33■□□□□ 0.05
TGFBR3-206ENST00000470600 RAD54L2Q9Y4B4 1467 aa15.32■□□□□ 0.04
TGFBR3-206ENST00000470600 EIF4G3O43432 1585 aaKnown RBP15.31■□□□□ 0.04
TGFBR3-206ENST00000470600 SENP3Q9H4L4 574 aaPredicted RBP15.3■□□□□ 0.04
TGFBR3-206ENST00000470600 ABCA5Q8WWZ7 1642 aa15.27■□□□□ 0.03
TGFBR3-206ENST00000470600 ABCA10Q8WWZ4 1543 aa15.27■□□□□ 0.03
TGFBR3-206ENST00000470600 SOGA1O94964 1423 aa15.23■□□□□ 0.03
TGFBR3-206ENST00000470600 AQRO60306 1485 aaKnown RBP eCLIP15.19■□□□□ 0.02
TGFBR3-206ENST00000470600 PBRM1Q86U86 1689 aa15.18■□□□□ 0.02
TGFBR3-206ENST00000470600 TDRD9Q8NDG6 1382 aaKnown RBP15.14■□□□□ 0.01
TGFBR3-206ENST00000470600 GAPVD1Q14C86 1478 aa15.1■□□□□ 0.01
TGFBR3-206ENST00000470600 CHD1O14646 1710 aa15.09■□□□□ 0.01
TGFBR3-206ENST00000470600 ADAMTS12P58397 1594 aa15.08■□□□□ 0
TGFBR3-206ENST00000470600 GRIN2BQ13224 1484 aa15.08■□□□□ 0
TGFBR3-206ENST00000470600 SNAPC4Q5SXM2 1469 aa15.08■□□□□ 0
TGFBR3-206ENST00000470600 ERICH3Q5RHP9 1530 aa15.06■□□□□ 0
TGFBR3-206ENST00000470600 MAGI1Q96QZ7 1491 aaPredicted RBP15.05■□□□□ -0
TGFBR3-206ENST00000470600 RUSC2Q8N2Y8 1516 aa15.04■□□□□ -0
TGFBR3-206ENST00000470600 PHF23Q9BUL5 403 aaPredicted RBP15.01□□□□□ -0.01
TGFBR3-206ENST00000470600 SYNJ2O15056 1496 aa14.99□□□□□ -0.01
TGFBR3-206ENST00000470600 CLASP1Q7Z460 1538 aa14.97□□□□□ -0.01
TGFBR3-206ENST00000470600 IGF1RP08069 1367 aa14.97□□□□□ -0.01
TGFBR3-206ENST00000470600 CUL7Q14999 1698 aa14.94□□□□□ -0.02
TGFBR3-206ENST00000470600 KIF27Q86VH2 1401 aa14.94□□□□□ -0.02
TGFBR3-206ENST00000470600 CEP170Q5SW79 1584 aa14.94□□□□□ -0.02
TGFBR3-206ENST00000470600 GRIN2AQ12879 1464 aa14.93□□□□□ -0.02
TGFBR3-206ENST00000470600 FHAD1B1AJZ9 1412 aa14.92□□□□□ -0.02
TGFBR3-206ENST00000470600 NUP160Q12769 1436 aa14.92□□□□□ -0.02
TGFBR3-206ENST00000470600 DNAJC5Q9H3Z4 198 aa14.88□□□□□ -0.03
TGFBR3-206ENST00000470600 PRXQ9BXM0 1461 aa14.87□□□□□ -0.03
TGFBR3-206ENST00000470600 SHROOM2Q13796 1616 aa14.86□□□□□ -0.03
TGFBR3-206ENST00000470600 TRIM41Q8WV44 630 aa14.86□□□□□ -0.03
TGFBR3-206ENST00000470600 CARMIL1Q5VZK9 1371 aa14.8□□□□□ -0.04
TGFBR3-206ENST00000470600 RIMBP3CA6NJZ7 1639 aa14.79□□□□□ -0.04
TGFBR3-206ENST00000470600 RIMBP3BA6NNM3 1639 aa14.79□□□□□ -0.04
TGFBR3-206ENST00000470600 ERCC6L2Q5T890 1561 aa14.79□□□□□ -0.04
TGFBR3-206ENST00000470600 OSCARQ8IYS5 282 aa14.79□□□□□ -0.04
TGFBR3-206ENST00000470600 RIMBP3Q9UFD9 1639 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms