RNA–Protein interactions for RNA: ENST00000470575.5

SFMBT1-202, Transcript of Scm like with four mbt domains 1, humanhuman

TSL 2

Gene SFMBT1, Length 698 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFMBT1-202ENST00000470575 NISCHQ9Y2I1 1504 aa45.62■■■■■ 4.89
SFMBT1-202ENST00000470575 ABCC9O60706 1549 aa41.04■■■■■ 4.16
SFMBT1-202ENST00000470575 CCDC180Q9P1Z9 1646 aa40.92■■■■■ 4.14
SFMBT1-202ENST00000470575 RB1CC1Q8TDY2 1594 aa38.95■■■■□ 3.83
SFMBT1-202ENST00000470575 NACADO15069 1562 aa38.65■■■■□ 3.78
SFMBT1-202ENST00000470575 DCAF8L2P0C7V8 631 aa38.54■■■■□ 3.76
SFMBT1-202ENST00000470575 DNAJC5BQ9UF47 199 aa38.48■■■■□ 3.75
SFMBT1-202ENST00000470575 PABPN1Q86U42 306 aaKnown RBP eCLIP38.19■■■■□ 3.7
SFMBT1-202ENST00000470575 UNC13AQ9UPW8 1703 aa38.15■■■■□ 3.7
SFMBT1-202ENST00000470575 MYO15BQ96JP2 1530 aa38.07■■■■□ 3.68
SFMBT1-202ENST00000470575 BICRAQ9NZM4 1560 aa37.89■■■■□ 3.66
SFMBT1-202ENST00000470575 ZCCHC6Q5VYS8 1495 aaKnown RBP37.85■■■■□ 3.65
SFMBT1-202ENST00000470575 DCAF1Q9Y4B6 1507 aa37.61■■■■□ 3.61
SFMBT1-202ENST00000470575 SCRIBQ14160 1630 aa37.43■■■■□ 3.58
SFMBT1-202ENST00000470575 SHROOM4Q9ULL8 1493 aa37.24■■■■□ 3.55
SFMBT1-202ENST00000470575 CC2D2AQ9P2K1 1620 aa37.04■■■■□ 3.52
SFMBT1-202ENST00000470575 EIF4G1Q04637 1599 aaKnown RBP36.95■■■■□ 3.51
SFMBT1-202ENST00000470575 CECR2Q9BXF3 1484 aa36.92■■■■□ 3.5
SFMBT1-202ENST00000470575 NCAPD3P42695 1498 aa35.68■■■■□ 3.3
SFMBT1-202ENST00000470575 ATAD2BQ9ULI0 1458 aa35.64■■■■□ 3.3
SFMBT1-202ENST00000470575 SMARCA4P51532 1647 aa35.62■■■■□ 3.29
SFMBT1-202ENST00000470575 SMARCA2P51531 1590 aa35.5■■■■□ 3.27
SFMBT1-202ENST00000470575 HMGXB3Q12766 1538 aa35.46■■■■□ 3.27
SFMBT1-202ENST00000470575 BAZ1AQ9NRL2 1556 aaPredicted RBP35.4■■■■□ 3.26
SFMBT1-202ENST00000470575 ERCC6Q03468 1493 aa35.39■■■■□ 3.26
SFMBT1-202ENST00000470575 BAZ1BQ9UIG0 1483 aaKnown RBP35.3■■■■□ 3.24
SFMBT1-202ENST00000470575 NESP48681 1621 aa35.27■■■■□ 3.24
SFMBT1-202ENST00000470575 CUX2O14529 1486 aa35.26■■■■□ 3.23
SFMBT1-202ENST00000470575 DNAJC5Q9H3Z4 198 aa35.23■■■■□ 3.23
SFMBT1-202ENST00000470575 MROH2BQ7Z745 1585 aa35.21■■■■□ 3.23
SFMBT1-202ENST00000470575 PEG3Q9GZU2 1588 aa35.21■■■■□ 3.23
SFMBT1-202ENST00000470575 LAMC3Q9Y6N6 1575 aa34.91■■■■□ 3.18
SFMBT1-202ENST00000470575 THOC2Q8NI27 1593 aaKnown RBP34.89■■■■□ 3.18
SFMBT1-202ENST00000470575 WIZO95785 1651 aa34.81■■■■□ 3.16
SFMBT1-202ENST00000470575 KIF21AQ7Z4S6 1674 aa34.79■■■■□ 3.16
SFMBT1-202ENST00000470575 PDS5BQ9NTI5 1447 aa34.68■■■■□ 3.14
SFMBT1-202ENST00000470575 CADPSQ9ULU8 1353 aa34.62■■■■□ 3.13
SFMBT1-202ENST00000470575 MRC2Q9UBG0 1479 aa34.46■■■■□ 3.11
SFMBT1-202ENST00000470575 RSF1Q96T23 1441 aaPredicted RBP34.44■■■■□ 3.1
SFMBT1-202ENST00000470575 WDR62O43379 1518 aa34.37■■■■□ 3.09
SFMBT1-202ENST00000470575 TOP2AP11388 1531 aaKnown RBP34.33■■■■□ 3.09
SFMBT1-202ENST00000470575 CEP164Q9UPV0 1460 aa34.32■■■■□ 3.08
SFMBT1-202ENST00000470575 FANCD2Q9BXW9 1451 aa34.28■■■■□ 3.08
SFMBT1-202ENST00000470575 CFTRP13569 1480 aa34.24■■■■□ 3.07
SFMBT1-202ENST00000470575 URB2Q14146 1524 aaKnown RBP34.03■■■■□ 3.04
SFMBT1-202ENST00000470575 CCDC88BA6NC98 1476 aa33.93■■■■□ 3.02
SFMBT1-202ENST00000470575 PRDM2Q13029 1718 aa33.91■■■■□ 3.02
SFMBT1-202ENST00000470575 TRIM41Q8WV44 630 aa33.81■■■■□ 3
SFMBT1-202ENST00000470575 TOPBP1Q92547 1522 aa33.64■■■□□ 2.98
SFMBT1-202ENST00000470575 ZNF608Q9ULD9 1512 aaPredicted RBP33.63■■■□□ 2.97
SFMBT1-202ENST00000470575 OSCARQ8IYS5 282 aa33.61■■■□□ 2.97
SFMBT1-202ENST00000470575 IFT140Q96RY7 1462 aa33.6■■■□□ 2.97
SFMBT1-202ENST00000470575 DNMBPQ6XZF7 1577 aa33.5■■■□□ 2.95
SFMBT1-202ENST00000470575 EIF4G3O43432 1585 aaKnown RBP33.45■■■□□ 2.95
SFMBT1-202ENST00000470575 ABCC8Q09428 1581 aa33.43■■■□□ 2.94
SFMBT1-202ENST00000470575 TARBP1Q13395 1621 aaKnown RBP33.33■■■□□ 2.93
SFMBT1-202ENST00000470575 RIMBP3CA6NJZ7 1639 aa33.31■■■□□ 2.92
SFMBT1-202ENST00000470575 RIMBP3BA6NNM3 1639 aa33.31■■■□□ 2.92
SFMBT1-202ENST00000470575 RIMBP3Q9UFD9 1639 aa33.31■■■□□ 2.92
SFMBT1-202ENST00000470575 POLA1P09884 1462 aaPredicted RBP33.31■■■□□ 2.92
SFMBT1-202ENST00000470575 AQRO60306 1485 aaKnown RBP eCLIP33.3■■■□□ 2.92
SFMBT1-202ENST00000470575 RAD54L2Q9Y4B4 1467 aa33.22■■■□□ 2.91
SFMBT1-202ENST00000470575 CHD1O14646 1710 aa33.19■■■□□ 2.9
SFMBT1-202ENST00000470575 ARHGEF11O15085 1522 aa33.18■■■□□ 2.9
SFMBT1-202ENST00000470575 FGD5Q6ZNL6 1462 aa33.11■■■□□ 2.89
SFMBT1-202ENST00000470575 SOGA1O94964 1423 aa33.11■■■□□ 2.89
SFMBT1-202ENST00000470575 TDRD9Q8NDG6 1382 aaKnown RBP33.09■■■□□ 2.89
SFMBT1-202ENST00000470575 CUX1P39880 1505 aa33.09■■■□□ 2.89
SFMBT1-202ENST00000470575 FBLN2P98095 1184 aa33.07■■■□□ 2.88
SFMBT1-202ENST00000470575 SNAPC4Q5SXM2 1469 aa32.99■■■□□ 2.87
SFMBT1-202ENST00000470575 SUPT5HO00267 1087 aaKnown RBP32.96■■■□□ 2.87
SFMBT1-202ENST00000470575 CYB5RLQ6IPT4 315 aa32.9■■■□□ 2.86
SFMBT1-202ENST00000470575 WDR97A6NE52 1622 aa32.9■■■□□ 2.86
SFMBT1-202ENST00000470575 ARAP1Q96P48 1450 aa32.89■■■□□ 2.86
SFMBT1-202ENST00000470575 GRIN2BQ13224 1484 aa32.82■■■□□ 2.84
SFMBT1-202ENST00000470575 MAGI1Q96QZ7 1491 aaPredicted RBP32.81■■■□□ 2.84
SFMBT1-202ENST00000470575 CLASP1Q7Z460 1538 aa32.78■■■□□ 2.84
SFMBT1-202ENST00000470575 CHMP7Q8WUX9 453 aaPredicted RBP32.77■■■□□ 2.84
SFMBT1-202ENST00000470575 PBRM1Q86U86 1689 aa32.75■■■□□ 2.83
SFMBT1-202ENST00000470575 SYNJ1O43426 1573 aa32.74■■■□□ 2.83
SFMBT1-202ENST00000470575 SYNJ2O15056 1496 aa32.72■■■□□ 2.83
SFMBT1-202ENST00000470575 GAPVD1Q14C86 1478 aa32.72■■■□□ 2.83
SFMBT1-202ENST00000470575 ABCA10Q8WWZ4 1543 aa32.68■■■□□ 2.82
SFMBT1-202ENST00000470575 ABCA5Q8WWZ7 1642 aa32.68■■■□□ 2.82
SFMBT1-202ENST00000470575 TRHP20396 242 aaPredicted RBP32.55■■■□□ 2.8
SFMBT1-202ENST00000470575 WRNQ14191 1432 aaPredicted RBP eCLIP32.52■■■□□ 2.8
SFMBT1-202ENST00000470575 BIVM-ERCC5R4GMW8 1640 aa32.51■■■□□ 2.8
SFMBT1-202ENST00000470575 TOP2BQ02880 1626 aa32.51■■■□□ 2.79
SFMBT1-202ENST00000470575 ADAMTS12P58397 1594 aa32.46■■■□□ 2.79
SFMBT1-202ENST00000470575 GRIN2AQ12879 1464 aa32.43■■■□□ 2.78
SFMBT1-202ENST00000470575 CEP170Q5SW79 1584 aa32.36■■■□□ 2.77
SFMBT1-202ENST00000470575 ERCC6L2Q5T890 1561 aa32.36■■■□□ 2.77
SFMBT1-202ENST00000470575 NUP160Q12769 1436 aa32.3■■■□□ 2.76
SFMBT1-202ENST00000470575 FHAD1B1AJZ9 1412 aa32.28■■■□□ 2.76
SFMBT1-202ENST00000470575 ERICH3Q5RHP9 1530 aa32.25■■■□□ 2.75
SFMBT1-202ENST00000470575 SHROOM2Q13796 1616 aa32.17■■■□□ 2.74
SFMBT1-202ENST00000470575 PRG4Q92954 1404 aaPredicted RBP32■■■□□ 2.71
SFMBT1-202ENST00000470575 RUSC2Q8N2Y8 1516 aa32■■■□□ 2.71
SFMBT1-202ENST00000470575 JPH4Q96JJ6 628 aa31.93■■■□□ 2.7
SFMBT1-202ENST00000470575 KIF27Q86VH2 1401 aa31.84■■■□□ 2.69
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms