RNA–Protein interactions for RNA: ENST00000470542.5

CPA4-203, Transcript of carboxypeptidase A4, humanhuman

TSL 4

Gene CPA4, Length 546 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPA4-203ENST00000470542 NISCHQ9Y2I1 1504 aa26.82■■□□□ 1.88
CPA4-203ENST00000470542 ABCC9O60706 1549 aa24.45■■□□□ 1.51
CPA4-203ENST00000470542 CCDC180Q9P1Z9 1646 aa24.17■■□□□ 1.46
CPA4-203ENST00000470542 RB1CC1Q8TDY2 1594 aa23.14■■□□□ 1.3
CPA4-203ENST00000470542 DNAJC5BQ9UF47 199 aa23.1■■□□□ 1.29
CPA4-203ENST00000470542 NACADO15069 1562 aa22.9■■□□□ 1.26
CPA4-203ENST00000470542 DCAF8L2P0C7V8 631 aa22.83■■□□□ 1.25
CPA4-203ENST00000470542 PABPN1Q86U42 306 aaKnown RBP eCLIP22.74■■□□□ 1.23
CPA4-203ENST00000470542 UNC13AQ9UPW8 1703 aa22.61■■□□□ 1.21
CPA4-203ENST00000470542 MYO15BQ96JP2 1530 aa22.47■■□□□ 1.19
CPA4-203ENST00000470542 BICRAQ9NZM4 1560 aa22.46■■□□□ 1.19
CPA4-203ENST00000470542 ZCCHC6Q5VYS8 1495 aaKnown RBP22.17■■□□□ 1.14
CPA4-203ENST00000470542 SHROOM4Q9ULL8 1493 aa22.11■■□□□ 1.13
CPA4-203ENST00000470542 DCAF1Q9Y4B6 1507 aa22.1■■□□□ 1.13
CPA4-203ENST00000470542 SCRIBQ14160 1630 aa22.07■■□□□ 1.12
CPA4-203ENST00000470542 CC2D2AQ9P2K1 1620 aa22.06■■□□□ 1.12
CPA4-203ENST00000470542 CECR2Q9BXF3 1484 aa22.04■■□□□ 1.12
CPA4-203ENST00000470542 EIF4G1Q04637 1599 aaKnown RBP21.95■■□□□ 1.1
CPA4-203ENST00000470542 DNAJC5Q9H3Z4 198 aa21.38■■□□□ 1.01
CPA4-203ENST00000470542 ERCC6Q03468 1493 aa21.15■□□□□ 0.98
CPA4-203ENST00000470542 CUX2O14529 1486 aa21.13■□□□□ 0.97
CPA4-203ENST00000470542 NCAPD3P42695 1498 aa21.13■□□□□ 0.97
CPA4-203ENST00000470542 ATAD2BQ9ULI0 1458 aa21.06■□□□□ 0.96
CPA4-203ENST00000470542 SMARCA2P51531 1590 aa20.99■□□□□ 0.95
CPA4-203ENST00000470542 SMARCA4P51532 1647 aa20.99■□□□□ 0.95
CPA4-203ENST00000470542 HMGXB3Q12766 1538 aa20.97■□□□□ 0.95
CPA4-203ENST00000470542 NESP48681 1621 aa20.93■□□□□ 0.94
CPA4-203ENST00000470542 BAZ1BQ9UIG0 1483 aaKnown RBP20.88■□□□□ 0.93
CPA4-203ENST00000470542 BAZ1AQ9NRL2 1556 aaPredicted RBP20.85■□□□□ 0.93
CPA4-203ENST00000470542 THOC2Q8NI27 1593 aaKnown RBP20.75■□□□□ 0.91
CPA4-203ENST00000470542 PEG3Q9GZU2 1588 aa20.75■□□□□ 0.91
CPA4-203ENST00000470542 LAMC3Q9Y6N6 1575 aa20.72■□□□□ 0.91
CPA4-203ENST00000470542 MROH2BQ7Z745 1585 aa20.68■□□□□ 0.9
CPA4-203ENST00000470542 KIF21AQ7Z4S6 1674 aa20.66■□□□□ 0.9
CPA4-203ENST00000470542 PDS5BQ9NTI5 1447 aa20.62■□□□□ 0.89
CPA4-203ENST00000470542 CADPSQ9ULU8 1353 aa20.49■□□□□ 0.87
CPA4-203ENST00000470542 MRC2Q9UBG0 1479 aa20.46■□□□□ 0.87
CPA4-203ENST00000470542 TRIM41Q8WV44 630 aa20.44■□□□□ 0.86
CPA4-203ENST00000470542 WIZO95785 1651 aa20.43■□□□□ 0.86
CPA4-203ENST00000470542 WDR62O43379 1518 aa20.41■□□□□ 0.86
CPA4-203ENST00000470542 CEP164Q9UPV0 1460 aa20.35■□□□□ 0.85
CPA4-203ENST00000470542 FANCD2Q9BXW9 1451 aa20.29■□□□□ 0.84
CPA4-203ENST00000470542 CFTRP13569 1480 aa20.2■□□□□ 0.82
CPA4-203ENST00000470542 RSF1Q96T23 1441 aaPredicted RBP20.15■□□□□ 0.82
CPA4-203ENST00000470542 TOP2AP11388 1531 aaKnown RBP20.15■□□□□ 0.82
CPA4-203ENST00000470542 OSCARQ8IYS5 282 aa20.14■□□□□ 0.81
CPA4-203ENST00000470542 URB2Q14146 1524 aaKnown RBP20.13■□□□□ 0.81
CPA4-203ENST00000470542 PRDM2Q13029 1718 aa20■□□□□ 0.79
CPA4-203ENST00000470542 IFT140Q96RY7 1462 aa19.93■□□□□ 0.78
CPA4-203ENST00000470542 ZNF608Q9ULD9 1512 aaPredicted RBP19.93■□□□□ 0.78
CPA4-203ENST00000470542 RIMBP3CA6NJZ7 1639 aa19.92■□□□□ 0.78
CPA4-203ENST00000470542 RIMBP3BA6NNM3 1639 aa19.92■□□□□ 0.78
CPA4-203ENST00000470542 RIMBP3Q9UFD9 1639 aa19.92■□□□□ 0.78
CPA4-203ENST00000470542 CCDC88BA6NC98 1476 aa19.92■□□□□ 0.78
CPA4-203ENST00000470542 TOPBP1Q92547 1522 aa19.87■□□□□ 0.77
CPA4-203ENST00000470542 EIF4G3O43432 1585 aaKnown RBP19.83■□□□□ 0.76
CPA4-203ENST00000470542 ARHGEF11O15085 1522 aa19.82■□□□□ 0.76
CPA4-203ENST00000470542 ABCC8Q09428 1581 aa19.8■□□□□ 0.76
CPA4-203ENST00000470542 DNMBPQ6XZF7 1577 aa19.78■□□□□ 0.76
CPA4-203ENST00000470542 CHD1O14646 1710 aa19.72■□□□□ 0.75
CPA4-203ENST00000470542 AQRO60306 1485 aaKnown RBP eCLIP19.72■□□□□ 0.75
CPA4-203ENST00000470542 CYB5RLQ6IPT4 315 aa19.71■□□□□ 0.75
CPA4-203ENST00000470542 TARBP1Q13395 1621 aaKnown RBP19.7■□□□□ 0.74
CPA4-203ENST00000470542 FBLN2P98095 1184 aa19.69■□□□□ 0.74
CPA4-203ENST00000470542 POLA1P09884 1462 aaPredicted RBP19.66■□□□□ 0.74
CPA4-203ENST00000470542 TRHP20396 242 aaPredicted RBP19.62■□□□□ 0.73
CPA4-203ENST00000470542 ARAP1Q96P48 1450 aa19.61■□□□□ 0.73
CPA4-203ENST00000470542 RAD54L2Q9Y4B4 1467 aa19.6■□□□□ 0.73
CPA4-203ENST00000470542 TDRD9Q8NDG6 1382 aaKnown RBP19.57■□□□□ 0.72
CPA4-203ENST00000470542 SOGA1O94964 1423 aa19.57■□□□□ 0.72
CPA4-203ENST00000470542 SNAPC4Q5SXM2 1469 aa19.54■□□□□ 0.72
CPA4-203ENST00000470542 FGD5Q6ZNL6 1462 aa19.51■□□□□ 0.71
CPA4-203ENST00000470542 WDR97A6NE52 1622 aa19.47■□□□□ 0.71
CPA4-203ENST00000470542 CHMP7Q8WUX9 453 aaPredicted RBP19.47■□□□□ 0.71
CPA4-203ENST00000470542 CLASP1Q7Z460 1538 aa19.46■□□□□ 0.71
CPA4-203ENST00000470542 SYNJ1O43426 1573 aa19.45■□□□□ 0.7
CPA4-203ENST00000470542 CUX1P39880 1505 aa19.45■□□□□ 0.7
CPA4-203ENST00000470542 MAGI1Q96QZ7 1491 aaPredicted RBP19.44■□□□□ 0.7
CPA4-203ENST00000470542 GRIN2BQ13224 1484 aa19.42■□□□□ 0.7
CPA4-203ENST00000470542 SYNJ2O15056 1496 aa19.39■□□□□ 0.69
CPA4-203ENST00000470542 PBRM1Q86U86 1689 aa19.35■□□□□ 0.69
CPA4-203ENST00000470542 GAPVD1Q14C86 1478 aa19.33■□□□□ 0.68
CPA4-203ENST00000470542 ABCA5Q8WWZ7 1642 aa19.25■□□□□ 0.67
CPA4-203ENST00000470542 ABCA10Q8WWZ4 1543 aa19.25■□□□□ 0.67
CPA4-203ENST00000470542 AEBP2Q6ZN18 517 aaPredicted RBP19.22■□□□□ 0.67
CPA4-203ENST00000470542 GRIN2AQ12879 1464 aa19.17■□□□□ 0.66
CPA4-203ENST00000470542 ERCC6L2Q5T890 1561 aa19.16■□□□□ 0.66
CPA4-203ENST00000470542 SUPT5HO00267 1087 aaKnown RBP19.15■□□□□ 0.66
CPA4-203ENST00000470542 ADAMTS12P58397 1594 aa19.15■□□□□ 0.66
CPA4-203ENST00000470542 WRNQ14191 1432 aaPredicted RBP eCLIP19.14■□□□□ 0.65
CPA4-203ENST00000470542 CEP170Q5SW79 1584 aa19.12■□□□□ 0.65
CPA4-203ENST00000470542 NUP160Q12769 1436 aa19.09■□□□□ 0.65
CPA4-203ENST00000470542 FHAD1B1AJZ9 1412 aa19.07■□□□□ 0.64
CPA4-203ENST00000470542 BIVM-ERCC5R4GMW8 1640 aa19.07■□□□□ 0.64
CPA4-203ENST00000470542 TOP2BQ02880 1626 aa19.06■□□□□ 0.64
CPA4-203ENST00000470542 SHROOM2Q13796 1616 aa19.03■□□□□ 0.64
CPA4-203ENST00000470542 ERICH3Q5RHP9 1530 aa19■□□□□ 0.63
CPA4-203ENST00000470542 PRG4Q92954 1404 aaPredicted RBP18.96■□□□□ 0.63
CPA4-203ENST00000470542 KIF13AQ9H1H9 1805 aa18.93■□□□□ 0.62
CPA4-203ENST00000470542 JPH4Q96JJ6 628 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms