RNA–Protein interactions for RNA: ENST00000470524.2

COL5A2-202, Transcript of collagen type V alpha 2 chain, humanhuman

TSL 5

Gene COL5A2, Length 704 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2-202ENST00000470524 NISCHQ9Y2I1 1504 aa23.56■■□□□ 1.36
COL5A2-202ENST00000470524 ABCC9O60706 1549 aa22.39■■□□□ 1.17
COL5A2-202ENST00000470524 DNAJC5BQ9UF47 199 aa21.85■■□□□ 1.09
COL5A2-202ENST00000470524 CCDC180Q9P1Z9 1646 aa21.47■■□□□ 1.03
COL5A2-202ENST00000470524 RB1CC1Q8TDY2 1594 aa20.88■□□□□ 0.93
COL5A2-202ENST00000470524 PABPN1Q86U42 306 aaKnown RBP eCLIP20.74■□□□□ 0.91
COL5A2-202ENST00000470524 DNAJC5Q9H3Z4 198 aa20.65■□□□□ 0.9
COL5A2-202ENST00000470524 NACADO15069 1562 aa20.53■□□□□ 0.88
COL5A2-202ENST00000470524 UNC13AQ9UPW8 1703 aa20.46■□□□□ 0.87
COL5A2-202ENST00000470524 BICRAQ9NZM4 1560 aa20.36■□□□□ 0.85
COL5A2-202ENST00000470524 DCAF8L2P0C7V8 631 aa20.3■□□□□ 0.84
COL5A2-202ENST00000470524 CECR2Q9BXF3 1484 aa20.24■□□□□ 0.83
COL5A2-202ENST00000470524 CC2D2AQ9P2K1 1620 aa20.17■□□□□ 0.82
COL5A2-202ENST00000470524 MYO15BQ96JP2 1530 aa19.95■□□□□ 0.78
COL5A2-202ENST00000470524 EIF4G1Q04637 1599 aaKnown RBP19.91■□□□□ 0.78
COL5A2-202ENST00000470524 SHROOM4Q9ULL8 1493 aa19.9■□□□□ 0.78
COL5A2-202ENST00000470524 AEBP2Q6ZN18 517 aaPredicted RBP19.83■□□□□ 0.77
COL5A2-202ENST00000470524 CUX2O14529 1486 aa19.6■□□□□ 0.73
COL5A2-202ENST00000470524 SCRIBQ14160 1630 aa19.54■□□□□ 0.72
COL5A2-202ENST00000470524 TRIM41Q8WV44 630 aa19.38■□□□□ 0.69
COL5A2-202ENST00000470524 DCAF1Q9Y4B6 1507 aa19.38■□□□□ 0.69
COL5A2-202ENST00000470524 ERCC6Q03468 1493 aa19.35■□□□□ 0.69
COL5A2-202ENST00000470524 ZCCHC6Q5VYS8 1495 aaKnown RBP19.33■□□□□ 0.68
COL5A2-202ENST00000470524 NESP48681 1621 aa19■□□□□ 0.63
COL5A2-202ENST00000470524 NCAPD3P42695 1498 aa18.99■□□□□ 0.63
COL5A2-202ENST00000470524 THOC2Q8NI27 1593 aaKnown RBP18.94■□□□□ 0.62
COL5A2-202ENST00000470524 ATAD2BQ9ULI0 1458 aa18.82■□□□□ 0.6
COL5A2-202ENST00000470524 SMARCA2P51531 1590 aa18.76■□□□□ 0.59
COL5A2-202ENST00000470524 HMGXB3Q12766 1538 aa18.73■□□□□ 0.59
COL5A2-202ENST00000470524 KIF21AQ7Z4S6 1674 aa18.7■□□□□ 0.58
COL5A2-202ENST00000470524 LAMC3Q9Y6N6 1575 aa18.67■□□□□ 0.58
COL5A2-202ENST00000470524 BAZ1AQ9NRL2 1556 aaPredicted RBP18.61■□□□□ 0.57
COL5A2-202ENST00000470524 OSCARQ8IYS5 282 aa18.61■□□□□ 0.57
COL5A2-202ENST00000470524 PDS5BQ9NTI5 1447 aa18.59■□□□□ 0.57
COL5A2-202ENST00000470524 SMARCA4P51532 1647 aa18.56■□□□□ 0.56
COL5A2-202ENST00000470524 BAZ1BQ9UIG0 1483 aaKnown RBP18.55■□□□□ 0.56
COL5A2-202ENST00000470524 MRC2Q9UBG0 1479 aa18.49■□□□□ 0.55
COL5A2-202ENST00000470524 WDR62O43379 1518 aa18.48■□□□□ 0.55
COL5A2-202ENST00000470524 RIMBP3CA6NJZ7 1639 aa18.45■□□□□ 0.54
COL5A2-202ENST00000470524 RIMBP3BA6NNM3 1639 aa18.45■□□□□ 0.54
COL5A2-202ENST00000470524 RIMBP3Q9UFD9 1639 aa18.45■□□□□ 0.54
COL5A2-202ENST00000470524 CHIC1Q5VXU3 224 aa18.43■□□□□ 0.54
COL5A2-202ENST00000470524 PEG3Q9GZU2 1588 aa18.38■□□□□ 0.53
COL5A2-202ENST00000470524 CADPSQ9ULU8 1353 aa18.37■□□□□ 0.53
COL5A2-202ENST00000470524 POTEDQ86YR6 584 aa18.33■□□□□ 0.52
COL5A2-202ENST00000470524 TRHP20396 242 aaPredicted RBP18.31■□□□□ 0.52
COL5A2-202ENST00000470524 ARHGEF11O15085 1522 aa18.3■□□□□ 0.52
COL5A2-202ENST00000470524 CYB5RLQ6IPT4 315 aa18.26■□□□□ 0.51
COL5A2-202ENST00000470524 CEP164Q9UPV0 1460 aa18.24■□□□□ 0.51
COL5A2-202ENST00000470524 MROH2BQ7Z745 1585 aa18.17■□□□□ 0.5
COL5A2-202ENST00000470524 FANCD2Q9BXW9 1451 aa18.16■□□□□ 0.5
COL5A2-202ENST00000470524 URB2Q14146 1524 aaKnown RBP18.08■□□□□ 0.49
COL5A2-202ENST00000470524 ARAP1Q96P48 1450 aa18.07■□□□□ 0.48
COL5A2-202ENST00000470524 ZNF608Q9ULD9 1512 aaPredicted RBP18.02■□□□□ 0.47
COL5A2-202ENST00000470524 CFTRP13569 1480 aa17.98■□□□□ 0.47
COL5A2-202ENST00000470524 WIZO95785 1651 aa17.91■□□□□ 0.46
COL5A2-202ENST00000470524 IFT140Q96RY7 1462 aa17.91■□□□□ 0.46
COL5A2-202ENST00000470524 CHD1O14646 1710 aa17.88■□□□□ 0.45
COL5A2-202ENST00000470524 RSF1Q96T23 1441 aaPredicted RBP17.88■□□□□ 0.45
COL5A2-202ENST00000470524 EIF4G3O43432 1585 aaKnown RBP17.83■□□□□ 0.44
COL5A2-202ENST00000470524 ILDR1Q86SU0 546 aaPredicted RBP17.8■□□□□ 0.44
COL5A2-202ENST00000470524 FBLN2P98095 1184 aa17.79■□□□□ 0.44
COL5A2-202ENST00000470524 AQRO60306 1485 aaKnown RBP eCLIP17.74■□□□□ 0.43
COL5A2-202ENST00000470524 TOPBP1Q92547 1522 aa17.72■□□□□ 0.43
COL5A2-202ENST00000470524 PRDM2Q13029 1718 aa17.69■□□□□ 0.42
COL5A2-202ENST00000470524 CLASP1Q7Z460 1538 aa17.65■□□□□ 0.42
COL5A2-202ENST00000470524 TARBP1Q13395 1621 aaKnown RBP17.63■□□□□ 0.41
COL5A2-202ENST00000470524 ABCC8Q09428 1581 aa17.59■□□□□ 0.41
COL5A2-202ENST00000470524 TOP2AP11388 1531 aaKnown RBP17.57■□□□□ 0.4
COL5A2-202ENST00000470524 DNMBPQ6XZF7 1577 aa17.56■□□□□ 0.4
COL5A2-202ENST00000470524 GAPVD1Q14C86 1478 aa17.53■□□□□ 0.4
COL5A2-202ENST00000470524 SYNJ1O43426 1573 aa17.53■□□□□ 0.4
COL5A2-202ENST00000470524 SNAPC4Q5SXM2 1469 aa17.5■□□□□ 0.39
COL5A2-202ENST00000470524 CHMP7Q8WUX9 453 aaPredicted RBP17.5■□□□□ 0.39
COL5A2-202ENST00000470524 TDRD9Q8NDG6 1382 aaKnown RBP17.5■□□□□ 0.39
COL5A2-202ENST00000470524 POLA1P09884 1462 aaPredicted RBP17.49■□□□□ 0.39
COL5A2-202ENST00000470524 RAD54L2Q9Y4B4 1467 aa17.47■□□□□ 0.39
COL5A2-202ENST00000470524 KDM4FA0A1W2PPD8 638 aa17.45■□□□□ 0.38
COL5A2-202ENST00000470524 CCDC88BA6NC98 1476 aa17.43■□□□□ 0.38
COL5A2-202ENST00000470524 KIF13AQ9H1H9 1805 aa17.4■□□□□ 0.38
COL5A2-202ENST00000470524 SOGA1O94964 1423 aa17.39■□□□□ 0.38
COL5A2-202ENST00000470524 MAGI1Q96QZ7 1491 aaPredicted RBP17.39■□□□□ 0.37
COL5A2-202ENST00000470524 SYNJ2O15056 1496 aa17.37■□□□□ 0.37
COL5A2-202ENST00000470524 ERCC6L2Q5T890 1561 aa17.35■□□□□ 0.37
COL5A2-202ENST00000470524 WDR97A6NE52 1622 aa17.33■□□□□ 0.37
COL5A2-202ENST00000470524 GRIN2BQ13224 1484 aa17.32■□□□□ 0.36
COL5A2-202ENST00000470524 FGD5Q6ZNL6 1462 aa17.25■□□□□ 0.35
COL5A2-202ENST00000470524 FAM69CQ0P6D2 419 aa17.21■□□□□ 0.35
COL5A2-202ENST00000470524 PBRM1Q86U86 1689 aa17.2■□□□□ 0.34
COL5A2-202ENST00000470524 CEP170Q5SW79 1584 aa17.19■□□□□ 0.34
COL5A2-202ENST00000470524 ABCC10Q5T3U5 1492 aa17.17■□□□□ 0.34
COL5A2-202ENST00000470524 KDM6BO15054 1643 aa17.16■□□□□ 0.34
COL5A2-202ENST00000470524 SENP3Q9H4L4 574 aaPredicted RBP17.14■□□□□ 0.33
COL5A2-202ENST00000470524 GRIN2AQ12879 1464 aa17.11■□□□□ 0.33
COL5A2-202ENST00000470524 CUX1P39880 1505 aa17.11■□□□□ 0.33
COL5A2-202ENST00000470524 SHROOM2Q13796 1616 aa17.1■□□□□ 0.33
COL5A2-202ENST00000470524 HECW2Q9P2P5 1572 aa17.1■□□□□ 0.33
COL5A2-202ENST00000470524 NUP160Q12769 1436 aa17.09■□□□□ 0.33
COL5A2-202ENST00000470524 DIP2BQ9P265 1576 aa17.09■□□□□ 0.33
COL5A2-202ENST00000470524 TSPOAP1O95153 1857 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms