RNA–Protein interactions for RNA: ENST00000470518.5

SGSM3-208, Transcript of small G protein signaling modulator 3, humanhuman

TSL 3

Gene SGSM3, Length 854 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGSM3-208ENST00000470518 NISCHQ9Y2I1 1504 aa34.09■■■■□ 3.05
SGSM3-208ENST00000470518 CCDC180Q9P1Z9 1646 aa30.65■■■□□ 2.5
SGSM3-208ENST00000470518 ABCC9O60706 1549 aa30.52■■■□□ 2.48
SGSM3-208ENST00000470518 RB1CC1Q8TDY2 1594 aa29.05■■■□□ 2.24
SGSM3-208ENST00000470518 NACADO15069 1562 aa28.88■■■□□ 2.21
SGSM3-208ENST00000470518 DNAJC5BQ9UF47 199 aa28.64■■■□□ 2.18
SGSM3-208ENST00000470518 UNC13AQ9UPW8 1703 aa28.6■■■□□ 2.17
SGSM3-208ENST00000470518 MYO15BQ96JP2 1530 aa28.54■■■□□ 2.16
SGSM3-208ENST00000470518 BICRAQ9NZM4 1560 aa28.39■■■□□ 2.14
SGSM3-208ENST00000470518 DCAF8L2P0C7V8 631 aa28.36■■■□□ 2.13
SGSM3-208ENST00000470518 ZCCHC6Q5VYS8 1495 aaKnown RBP28.33■■■□□ 2.13
SGSM3-208ENST00000470518 PABPN1Q86U42 306 aaKnown RBP eCLIP28.3■■■□□ 2.12
SGSM3-208ENST00000470518 DCAF1Q9Y4B6 1507 aa28.19■■■□□ 2.1
SGSM3-208ENST00000470518 SHROOM4Q9ULL8 1493 aa27.89■■■□□ 2.06
SGSM3-208ENST00000470518 SCRIBQ14160 1630 aa27.89■■■□□ 2.05
SGSM3-208ENST00000470518 CC2D2AQ9P2K1 1620 aa27.64■■■□□ 2.02
SGSM3-208ENST00000470518 EIF4G1Q04637 1599 aaKnown RBP27.6■■■□□ 2.01
SGSM3-208ENST00000470518 CECR2Q9BXF3 1484 aa27.47■■□□□ 1.99
SGSM3-208ENST00000470518 NCAPD3P42695 1498 aa26.66■■□□□ 1.86
SGSM3-208ENST00000470518 SMARCA4P51532 1647 aa26.64■■□□□ 1.85
SGSM3-208ENST00000470518 ATAD2BQ9ULI0 1458 aa26.61■■□□□ 1.85
SGSM3-208ENST00000470518 HMGXB3Q12766 1538 aa26.54■■□□□ 1.84
SGSM3-208ENST00000470518 SMARCA2P51531 1590 aa26.48■■□□□ 1.83
SGSM3-208ENST00000470518 PEG3Q9GZU2 1588 aa26.42■■□□□ 1.82
SGSM3-208ENST00000470518 BAZ1AQ9NRL2 1556 aaPredicted RBP26.42■■□□□ 1.82
SGSM3-208ENST00000470518 MROH2BQ7Z745 1585 aa26.31■■□□□ 1.8
SGSM3-208ENST00000470518 NESP48681 1621 aa26.29■■□□□ 1.8
SGSM3-208ENST00000470518 CUX2O14529 1486 aa26.29■■□□□ 1.8
SGSM3-208ENST00000470518 BAZ1BQ9UIG0 1483 aaKnown RBP26.29■■□□□ 1.8
SGSM3-208ENST00000470518 ERCC6Q03468 1493 aa26.23■■□□□ 1.79
SGSM3-208ENST00000470518 DNAJC5Q9H3Z4 198 aa26.15■■□□□ 1.78
SGSM3-208ENST00000470518 THOC2Q8NI27 1593 aaKnown RBP26.13■■□□□ 1.77
SGSM3-208ENST00000470518 LAMC3Q9Y6N6 1575 aa26.07■■□□□ 1.76
SGSM3-208ENST00000470518 KIF21AQ7Z4S6 1674 aa26.01■■□□□ 1.75
SGSM3-208ENST00000470518 WIZO95785 1651 aa25.99■■□□□ 1.75
SGSM3-208ENST00000470518 CADPSQ9ULU8 1353 aa25.78■■□□□ 1.72
SGSM3-208ENST00000470518 PDS5BQ9NTI5 1447 aa25.78■■□□□ 1.72
SGSM3-208ENST00000470518 RSF1Q96T23 1441 aaPredicted RBP25.71■■□□□ 1.71
SGSM3-208ENST00000470518 WDR62O43379 1518 aa25.69■■□□□ 1.7
SGSM3-208ENST00000470518 MRC2Q9UBG0 1479 aa25.67■■□□□ 1.7
SGSM3-208ENST00000470518 TOP2AP11388 1531 aaKnown RBP25.65■■□□□ 1.7
SGSM3-208ENST00000470518 CFTRP13569 1480 aa25.58■■□□□ 1.69
SGSM3-208ENST00000470518 CEP164Q9UPV0 1460 aa25.55■■□□□ 1.68
SGSM3-208ENST00000470518 FANCD2Q9BXW9 1451 aa25.53■■□□□ 1.68
SGSM3-208ENST00000470518 PRDM2Q13029 1718 aa25.43■■□□□ 1.66
SGSM3-208ENST00000470518 URB2Q14146 1524 aaKnown RBP25.42■■□□□ 1.66
SGSM3-208ENST00000470518 CCDC88BA6NC98 1476 aa25.31■■□□□ 1.64
SGSM3-208ENST00000470518 TOPBP1Q92547 1522 aa25.1■■□□□ 1.61
SGSM3-208ENST00000470518 ZNF608Q9ULD9 1512 aaPredicted RBP25.08■■□□□ 1.61
SGSM3-208ENST00000470518 IFT140Q96RY7 1462 aa25.02■■□□□ 1.6
SGSM3-208ENST00000470518 DNMBPQ6XZF7 1577 aa25.02■■□□□ 1.6
SGSM3-208ENST00000470518 EIF4G3O43432 1585 aaKnown RBP24.99■■□□□ 1.59
SGSM3-208ENST00000470518 TARBP1Q13395 1621 aaKnown RBP24.97■■□□□ 1.59
SGSM3-208ENST00000470518 TRIM41Q8WV44 630 aa24.91■■□□□ 1.58
SGSM3-208ENST00000470518 ABCC8Q09428 1581 aa24.9■■□□□ 1.58
SGSM3-208ENST00000470518 OSCARQ8IYS5 282 aa24.87■■□□□ 1.57
SGSM3-208ENST00000470518 POLA1P09884 1462 aaPredicted RBP24.86■■□□□ 1.57
SGSM3-208ENST00000470518 RIMBP3CA6NJZ7 1639 aa24.84■■□□□ 1.57
SGSM3-208ENST00000470518 RIMBP3BA6NNM3 1639 aa24.84■■□□□ 1.57
SGSM3-208ENST00000470518 RIMBP3Q9UFD9 1639 aa24.84■■□□□ 1.57
SGSM3-208ENST00000470518 CHD1O14646 1710 aa24.79■■□□□ 1.56
SGSM3-208ENST00000470518 AQRO60306 1485 aaKnown RBP eCLIP24.77■■□□□ 1.561e-6■■■■■ 27.3
SGSM3-208ENST00000470518 ARHGEF11O15085 1522 aa24.74■■□□□ 1.55
SGSM3-208ENST00000470518 CUX1P39880 1505 aa24.73■■□□□ 1.55
SGSM3-208ENST00000470518 RAD54L2Q9Y4B4 1467 aa24.73■■□□□ 1.55
SGSM3-208ENST00000470518 FGD5Q6ZNL6 1462 aa24.68■■□□□ 1.54
SGSM3-208ENST00000470518 WDR97A6NE52 1622 aa24.67■■□□□ 1.54
SGSM3-208ENST00000470518 SOGA1O94964 1423 aa24.6■■□□□ 1.53
SGSM3-208ENST00000470518 TDRD9Q8NDG6 1382 aaKnown RBP24.57■■□□□ 1.52
SGSM3-208ENST00000470518 SNAPC4Q5SXM2 1469 aa24.56■■□□□ 1.52
SGSM3-208ENST00000470518 CLASP1Q7Z460 1538 aa24.54■■□□□ 1.52
SGSM3-208ENST00000470518 ARAP1Q96P48 1450 aa24.53■■□□□ 1.52
SGSM3-208ENST00000470518 PBRM1Q86U86 1689 aa24.48■■□□□ 1.51
SGSM3-208ENST00000470518 ABCA5Q8WWZ7 1642 aa24.48■■□□□ 1.51
SGSM3-208ENST00000470518 MAGI1Q96QZ7 1491 aaPredicted RBP24.47■■□□□ 1.51
SGSM3-208ENST00000470518 GRIN2BQ13224 1484 aa24.44■■□□□ 1.5
SGSM3-208ENST00000470518 ABCA10Q8WWZ4 1543 aa24.4■■□□□ 1.5
SGSM3-208ENST00000470518 SYNJ2O15056 1496 aa24.38■■□□□ 1.49
SGSM3-208ENST00000470518 FBLN2P98095 1184 aa24.37■■□□□ 1.49
SGSM3-208ENST00000470518 SYNJ1O43426 1573 aa24.37■■□□□ 1.49
SGSM3-208ENST00000470518 BIVM-ERCC5R4GMW8 1640 aa24.35■■□□□ 1.49
SGSM3-208ENST00000470518 GAPVD1Q14C86 1478 aa24.35■■□□□ 1.49
SGSM3-208ENST00000470518 SUPT5HO00267 1087 aaKnown RBP24.32■■□□□ 1.48
SGSM3-208ENST00000470518 CYB5RLQ6IPT4 315 aa24.31■■□□□ 1.48
SGSM3-208ENST00000470518 TOP2BQ02880 1626 aa24.31■■□□□ 1.48
SGSM3-208ENST00000470518 ADAMTS12P58397 1594 aa24.27■■□□□ 1.48
SGSM3-208ENST00000470518 CHMP7Q8WUX9 453 aaPredicted RBP24.21■■□□□ 1.47
SGSM3-208ENST00000470518 GRIN2AQ12879 1464 aa24.19■■□□□ 1.46
SGSM3-208ENST00000470518 WRNQ14191 1432 aaPredicted RBP eCLIP24.18■■□□□ 1.46
SGSM3-208ENST00000470518 CEP170Q5SW79 1584 aa24.18■■□□□ 1.46
SGSM3-208ENST00000470518 ERCC6L2Q5T890 1561 aa24.16■■□□□ 1.46
SGSM3-208ENST00000470518 NUP160Q12769 1436 aa24.13■■□□□ 1.45
SGSM3-208ENST00000470518 SHROOM2Q13796 1616 aa24.1■■□□□ 1.45
SGSM3-208ENST00000470518 ERICH3Q5RHP9 1530 aa24.09■■□□□ 1.45
SGSM3-208ENST00000470518 FHAD1B1AJZ9 1412 aa24.03■■□□□ 1.44
SGSM3-208ENST00000470518 RUSC2Q8N2Y8 1516 aa23.95■■□□□ 1.43
SGSM3-208ENST00000470518 TRHP20396 242 aaPredicted RBP23.94■■□□□ 1.42
SGSM3-208ENST00000470518 PRG4Q92954 1404 aaPredicted RBP23.78■■□□□ 1.4
SGSM3-208ENST00000470518 KIF13AQ9H1H9 1805 aa23.76■■□□□ 1.39
SGSM3-208ENST00000470518 CUL7Q14999 1698 aa23.76■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 206 ms