RNA–Protein interactions for RNA: ENST00000470494.5

CDH23-210, Transcript of cadherin related 23, humanhuman

TSL 3

Gene CDH23, Length 704 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-210ENST00000470494 NISCHQ9Y2I1 1504 aa40.58■■■■■ 4.09
CDH23-210ENST00000470494 CCDC180Q9P1Z9 1646 aa36.26■■■■□ 3.39
CDH23-210ENST00000470494 ABCC9O60706 1549 aa35.73■■■■□ 3.31
CDH23-210ENST00000470494 RB1CC1Q8TDY2 1594 aa34.24■■■■□ 3.07
CDH23-210ENST00000470494 DCAF8L2P0C7V8 631 aa34.11■■■■□ 3.05
CDH23-210ENST00000470494 NACADO15069 1562 aa34.1■■■■□ 3.05
CDH23-210ENST00000470494 ZCCHC6Q5VYS8 1495 aaKnown RBP33.76■■■■□ 3
CDH23-210ENST00000470494 MYO15BQ96JP2 1530 aa33.72■■■□□ 2.99
CDH23-210ENST00000470494 UNC13AQ9UPW8 1703 aa33.56■■■□□ 2.96
CDH23-210ENST00000470494 DCAF1Q9Y4B6 1507 aa33.51■■■□□ 2.95
CDH23-210ENST00000470494 PABPN1Q86U42 306 aaKnown RBP eCLIP33.31■■■□□ 2.92
CDH23-210ENST00000470494 BICRAQ9NZM4 1560 aa33.17■■■□□ 2.9
CDH23-210ENST00000470494 SCRIBQ14160 1630 aa33.14■■■□□ 2.9
CDH23-210ENST00000470494 DNAJC5BQ9UF47 199 aa32.9■■■□□ 2.86
CDH23-210ENST00000470494 SHROOM4Q9ULL8 1493 aa32.75■■■□□ 2.83
CDH23-210ENST00000470494 EIF4G1Q04637 1599 aaKnown RBP32.35■■■□□ 2.77
CDH23-210ENST00000470494 CC2D2AQ9P2K1 1620 aa32.3■■■□□ 2.76
CDH23-210ENST00000470494 CECR2Q9BXF3 1484 aa32.1■■■□□ 2.73
CDH23-210ENST00000470494 SMARCA4P51532 1647 aa31.6■■■□□ 2.65
CDH23-210ENST00000470494 BAZ1AQ9NRL2 1556 aaPredicted RBP31.51■■■□□ 2.63
CDH23-210ENST00000470494 ATAD2BQ9ULI0 1458 aa31.42■■■□□ 2.62
CDH23-210ENST00000470494 SMARCA2P51531 1590 aa31.42■■■□□ 2.62
CDH23-210ENST00000470494 NCAPD3P42695 1498 aa31.4■■■□□ 2.62
CDH23-210ENST00000470494 MROH2BQ7Z745 1585 aa31.3■■■□□ 2.6
CDH23-210ENST00000470494 HMGXB3Q12766 1538 aa31.29■■■□□ 2.6
CDH23-210ENST00000470494 BAZ1BQ9UIG0 1483 aaKnown RBP31.22■■■□□ 2.59
CDH23-210ENST00000470494 PEG3Q9GZU2 1588 aa31.22■■■□□ 2.59
CDH23-210ENST00000470494 WIZO95785 1651 aa31.02■■■□□ 2.56
CDH23-210ENST00000470494 ERCC6Q03468 1493 aa30.85■■■□□ 2.53
CDH23-210ENST00000470494 NESP48681 1621 aa30.84■■■□□ 2.53
CDH23-210ENST00000470494 RSF1Q96T23 1441 aaPredicted RBP30.81■■■□□ 2.52
CDH23-210ENST00000470494 LAMC3Q9Y6N6 1575 aa30.7■■■□□ 2.5
CDH23-210ENST00000470494 TOP2AP11388 1531 aaKnown RBP30.63■■■□□ 2.49
CDH23-210ENST00000470494 KIF21AQ7Z4S6 1674 aa30.55■■■□□ 2.48
CDH23-210ENST00000470494 CUX2O14529 1486 aa30.52■■■□□ 2.48
CDH23-210ENST00000470494 CADPSQ9ULU8 1353 aa30.5■■■□□ 2.47
CDH23-210ENST00000470494 PDS5BQ9NTI5 1447 aa30.47■■■□□ 2.47
CDH23-210ENST00000470494 THOC2Q8NI27 1593 aaKnown RBP30.43■■■□□ 2.46
CDH23-210ENST00000470494 CFTRP13569 1480 aa30.26■■■□□ 2.44
CDH23-210ENST00000470494 CCDC88BA6NC98 1476 aa30.23■■■□□ 2.43
CDH23-210ENST00000470494 CEP164Q9UPV0 1460 aa30.22■■■□□ 2.43
CDH23-210ENST00000470494 FANCD2Q9BXW9 1451 aa30.21■■■□□ 2.43
CDH23-210ENST00000470494 MRC2Q9UBG0 1479 aa30.21■■■□□ 2.43
CDH23-210ENST00000470494 PRDM2Q13029 1718 aa30.2■■■□□ 2.43
CDH23-210ENST00000470494 WDR62O43379 1518 aa30.11■■■□□ 2.41
CDH23-210ENST00000470494 SUPT5HO00267 1087 aaKnown RBP29.95■■■□□ 2.39
CDH23-210ENST00000470494 URB2Q14146 1524 aaKnown RBP29.92■■■□□ 2.38
CDH23-210ENST00000470494 DNAJC5Q9H3Z4 198 aa29.82■■■□□ 2.36
CDH23-210ENST00000470494 TOPBP1Q92547 1522 aa29.7■■■□□ 2.34
CDH23-210ENST00000470494 DNMBPQ6XZF7 1577 aa29.66■■■□□ 2.34
CDH23-210ENST00000470494 ABCC8Q09428 1581 aa29.64■■■□□ 2.33
CDH23-210ENST00000470494 IFT140Q96RY7 1462 aa29.55■■■□□ 2.32
CDH23-210ENST00000470494 ZNF608Q9ULD9 1512 aaPredicted RBP29.46■■■□□ 2.31
CDH23-210ENST00000470494 POLA1P09884 1462 aaPredicted RBP29.42■■■□□ 2.3
CDH23-210ENST00000470494 EIF4G3O43432 1585 aaKnown RBP29.4■■■□□ 2.3
CDH23-210ENST00000470494 TARBP1Q13395 1621 aaKnown RBP29.39■■■□□ 2.3
CDH23-210ENST00000470494 CUX1P39880 1505 aa29.39■■■□□ 2.3
CDH23-210ENST00000470494 FGD5Q6ZNL6 1462 aa29.35■■■□□ 2.29
CDH23-210ENST00000470494 RAD54L2Q9Y4B4 1467 aa29.32■■■□□ 2.28
CDH23-210ENST00000470494 SOGA1O94964 1423 aa29.28■■■□□ 2.28
CDH23-210ENST00000470494 AQRO60306 1485 aaKnown RBP eCLIP29.26■■■□□ 2.27
CDH23-210ENST00000470494 OSCARQ8IYS5 282 aa29.19■■■□□ 2.26
CDH23-210ENST00000470494 TDRD9Q8NDG6 1382 aaKnown RBP29.16■■■□□ 2.26
CDH23-210ENST00000470494 WDR97A6NE52 1622 aa29.15■■■□□ 2.26
CDH23-210ENST00000470494 CHD1O14646 1710 aa29.14■■■□□ 2.25
CDH23-210ENST00000470494 WRNQ14191 1432 aaPredicted RBP eCLIP29.11■■■□□ 2.25
CDH23-210ENST00000470494 BIVM-ERCC5R4GMW8 1640 aa29.09■■■□□ 2.25
CDH23-210ENST00000470494 SYNJ1O43426 1573 aa29.09■■■□□ 2.25
CDH23-210ENST00000470494 TOP2BQ02880 1626 aa29.08■■■□□ 2.25
CDH23-210ENST00000470494 PBRM1Q86U86 1689 aa29.03■■■□□ 2.24
CDH23-210ENST00000470494 FBLN2P98095 1184 aa29.02■■■□□ 2.24
CDH23-210ENST00000470494 SNAPC4Q5SXM2 1469 aa29.02■■■□□ 2.24
CDH23-210ENST00000470494 ABCA10Q8WWZ4 1543 aa29■■■□□ 2.23
CDH23-210ENST00000470494 GRIN2BQ13224 1484 aa28.98■■■□□ 2.23
CDH23-210ENST00000470494 GAPVD1Q14C86 1478 aa28.97■■■□□ 2.23
CDH23-210ENST00000470494 ABCA5Q8WWZ7 1642 aa28.95■■■□□ 2.23
CDH23-210ENST00000470494 MAGI1Q96QZ7 1491 aaPredicted RBP28.93■■■□□ 2.22
CDH23-210ENST00000470494 TRIM41Q8WV44 630 aa28.89■■■□□ 2.22
CDH23-210ENST00000470494 RIMBP3CA6NJZ7 1639 aa28.86■■■□□ 2.21
CDH23-210ENST00000470494 RIMBP3BA6NNM3 1639 aa28.86■■■□□ 2.21
CDH23-210ENST00000470494 RIMBP3Q9UFD9 1639 aa28.86■■■□□ 2.21
CDH23-210ENST00000470494 CHMP7Q8WUX9 453 aaPredicted RBP28.85■■■□□ 2.21
CDH23-210ENST00000470494 SYNJ2O15056 1496 aa28.83■■■□□ 2.21
CDH23-210ENST00000470494 ARHGEF11O15085 1522 aa28.79■■■□□ 2.2
CDH23-210ENST00000470494 ADAMTS12P58397 1594 aa28.72■■■□□ 2.19
CDH23-210ENST00000470494 CLASP1Q7Z460 1538 aa28.69■■■□□ 2.18
CDH23-210ENST00000470494 ERICH3Q5RHP9 1530 aa28.67■■■□□ 2.18
CDH23-210ENST00000470494 GRIN2AQ12879 1464 aa28.62■■■□□ 2.17
CDH23-210ENST00000470494 FHAD1B1AJZ9 1412 aa28.6■■■□□ 2.17
CDH23-210ENST00000470494 ARAP1Q96P48 1450 aa28.53■■■□□ 2.16
CDH23-210ENST00000470494 CEP170Q5SW79 1584 aa28.52■■■□□ 2.16
CDH23-210ENST00000470494 CYB5RLQ6IPT4 315 aa28.51■■■□□ 2.15
CDH23-210ENST00000470494 KIF27Q86VH2 1401 aa28.51■■■□□ 2.15
CDH23-210ENST00000470494 NUP160Q12769 1436 aa28.46■■■□□ 2.15
CDH23-210ENST00000470494 CUL7Q14999 1698 aa28.42■■■□□ 2.14
CDH23-210ENST00000470494 IGF1RP08069 1367 aa28.36■■■□□ 2.13
CDH23-210ENST00000470494 SHROOM2Q13796 1616 aa28.32■■■□□ 2.12
CDH23-210ENST00000470494 ERCC6L2Q5T890 1561 aa28.32■■■□□ 2.12
CDH23-210ENST00000470494 RUSC2Q8N2Y8 1516 aa28.3■■■□□ 2.12
CDH23-210ENST00000470494 CARMIL1Q5VZK9 1371 aa28.23■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms