RNA–Protein interactions for RNA: ENST00000470474.1

ATG7-222, Transcript of autophagy related 7, human

TSL 1 (best)

Gene ATG7, Length 534 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATG7-222	ENST00000470474	NISCH	Q9Y2I1	1504 aa		44.8	■■■■■ 4.76
ATG7-222	ENST00000470474	CCDC180	Q9P1Z9	1646 aa		40.18	■■■■■ 4.02
ATG7-222	ENST00000470474	ABCC9	O60706	1549 aa		39.9	■■■■□ 3.98
ATG7-222	ENST00000470474	RB1CC1	Q8TDY2	1594 aa		38.1	■■■■□ 3.69
ATG7-222	ENST00000470474	NACAD	O15069	1562 aa		37.89	■■■■□ 3.66
ATG7-222	ENST00000470474	DCAF8L2	P0C7V8	631 aa		37.56	■■■■□ 3.6
ATG7-222	ENST00000470474	MYO15B	Q96JP2	1530 aa		37.47	■■■■□ 3.59
ATG7-222	ENST00000470474	UNC13A	Q9UPW8	1703 aa		37.29	■■■■□ 3.56
ATG7-222	ENST00000470474	DNAJC5B	Q9UF47	199 aa		37.22	■■■■□ 3.55
ATG7-222	ENST00000470474	ZCCHC6	Q5VYS8	1495 aa	Known RBP	37.2	■■■■□ 3.55
ATG7-222	ENST00000470474	PABPN1	Q86U42	306 aa	Known RBP eCLIP	37.11	■■■■□ 3.53
ATG7-222	ENST00000470474	DCAF1	Q9Y4B6	1507 aa		37.05	■■■■□ 3.52
ATG7-222	ENST00000470474	BICRA	Q9NZM4	1560 aa		37.01	■■■■□ 3.52
ATG7-222	ENST00000470474	SCRIB	Q14160	1630 aa		36.57	■■■■□ 3.44
ATG7-222	ENST00000470474	SHROOM4	Q9ULL8	1493 aa		36.56	■■■■□ 3.44
ATG7-222	ENST00000470474	CC2D2A	Q9P2K1	1620 aa		36.09	■■■■□ 3.37
ATG7-222	ENST00000470474	EIF4G1	Q04637	1599 aa	Known RBP	36.08	■■■■□ 3.37
ATG7-222	ENST00000470474	CECR2	Q9BXF3	1484 aa		35.92	■■■■□ 3.34
ATG7-222	ENST00000470474	NCAPD3	P42695	1498 aa		34.97	■■■■□ 3.19
ATG7-222	ENST00000470474	SMARCA4	P51532	1647 aa		34.93	■■■■□ 3.18
ATG7-222	ENST00000470474	ATAD2B	Q9ULI0	1458 aa		34.89	■■■■□ 3.18
ATG7-222	ENST00000470474	SMARCA2	P51531	1590 aa		34.81	■■■■□ 3.16
ATG7-222	ENST00000470474	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	34.78	■■■■□ 3.16
ATG7-222	ENST00000470474	HMGXB3	Q12766	1538 aa		34.77	■■■■□ 3.16
ATG7-222	ENST00000470474	PEG3	Q9GZU2	1588 aa		34.62	■■■■□ 3.13
ATG7-222	ENST00000470474	BAZ1B	Q9UIG0	1483 aa	Known RBP	34.55	■■■■□ 3.12
ATG7-222	ENST00000470474	MROH2B	Q7Z745	1585 aa		34.51	■■■■□ 3.12
ATG7-222	ENST00000470474	ERCC6	Q03468	1493 aa		34.43	■■■■□ 3.1
ATG7-222	ENST00000470474	CUX2	O14529	1486 aa		34.34	■■■■□ 3.09
ATG7-222	ENST00000470474	NES	P48681	1621 aa		34.34	■■■■□ 3.09
ATG7-222	ENST00000470474	LAMC3	Q9Y6N6	1575 aa		34.17	■■■■□ 3.06
ATG7-222	ENST00000470474	WIZ	O95785	1651 aa		34.12	■■■■□ 3.05
ATG7-222	ENST00000470474	THOC2	Q8NI27	1593 aa	Known RBP	34.03	■■■■□ 3.04
ATG7-222	ENST00000470474	DNAJC5	Q9H3Z4	198 aa		34.03	■■■■□ 3.04
ATG7-222	ENST00000470474	KIF21A	Q7Z4S6	1674 aa		33.96	■■■■□ 3.03
ATG7-222	ENST00000470474	PDS5B	Q9NTI5	1447 aa		33.92	■■■■□ 3.02
ATG7-222	ENST00000470474	CADPS	Q9ULU8	1353 aa		33.88	■■■■□ 3.01
ATG7-222	ENST00000470474	RSF1	Q96T23	1441 aa	Predicted RBP	33.85	■■■■□ 3.01
ATG7-222	ENST00000470474	TOP2A	P11388	1531 aa	Known RBP	33.72	■■■□□ 2.99
ATG7-222	ENST00000470474	MRC2	Q9UBG0	1479 aa		33.64	■■■□□ 2.98
ATG7-222	ENST00000470474	WDR62	O43379	1518 aa		33.59	■■■□□ 2.97
ATG7-222	ENST00000470474	CFTR	P13569	1480 aa		33.57	■■■□□ 2.97
ATG7-222	ENST00000470474	CEP164	Q9UPV0	1460 aa		33.55	■■■□□ 2.96
ATG7-222	ENST00000470474	FANCD2	Q9BXW9	1451 aa		33.51	■■■□□ 2.96
ATG7-222	ENST00000470474	PRDM2	Q13029	1718 aa		33.32	■■■□□ 2.92
ATG7-222	ENST00000470474	CCDC88B	A6NC98	1476 aa		33.29	■■■□□ 2.92
ATG7-222	ENST00000470474	URB2	Q14146	1524 aa	Known RBP	33.25	■■■□□ 2.91
ATG7-222	ENST00000470474	TOPBP1	Q92547	1522 aa		32.92	■■■□□ 2.86
ATG7-222	ENST00000470474	IFT140	Q96RY7	1462 aa		32.86	■■■□□ 2.85
ATG7-222	ENST00000470474	ABCC8	Q09428	1581 aa		32.84	■■■□□ 2.85
ATG7-222	ENST00000470474	DNMBP	Q6XZF7	1577 aa		32.83	■■■□□ 2.85
ATG7-222	ENST00000470474	ZNF608	Q9ULD9	1512 aa	Predicted RBP	32.79	■■■□□ 2.84
ATG7-222	ENST00000470474	OSCAR	Q8IYS5	282 aa		32.71	■■■□□ 2.83
ATG7-222	ENST00000470474	EIF4G3	O43432	1585 aa	Known RBP	32.67	■■■□□ 2.82
ATG7-222	ENST00000470474	TARBP1	Q13395	1621 aa	Known RBP	32.64	■■■□□ 2.82
ATG7-222	ENST00000470474	POLA1	P09884	1462 aa	Predicted RBP	32.6	■■■□□ 2.81
ATG7-222	ENST00000470474	TRIM41	Q8WV44	630 aa		32.58	■■■□□ 2.81
ATG7-222	ENST00000470474	AQR	O60306	1485 aa	Known RBP eCLIP	32.48	■■■□□ 2.79
ATG7-222	ENST00000470474	RAD54L2	Q9Y4B4	1467 aa		32.44	■■■□□ 2.78
ATG7-222	ENST00000470474	CUX1	P39880	1505 aa		32.42	■■■□□ 2.78
ATG7-222	ENST00000470474	FGD5	Q6ZNL6	1462 aa		32.42	■■■□□ 2.78
ATG7-222	ENST00000470474	SOGA1	O94964	1423 aa		32.4	■■■□□ 2.78
ATG7-222	ENST00000470474	SUPT5H	O00267	1087 aa	Known RBP	32.39	■■■□□ 2.78
ATG7-222	ENST00000470474	CHD1	O14646	1710 aa		32.38	■■■□□ 2.77
ATG7-222	ENST00000470474	RIMBP3C	A6NJZ7	1639 aa		32.37	■■■□□ 2.77
ATG7-222	ENST00000470474	RIMBP3B	A6NNM3	1639 aa		32.37	■■■□□ 2.77
ATG7-222	ENST00000470474	RIMBP3	Q9UFD9	1639 aa		32.37	■■■□□ 2.77
ATG7-222	ENST00000470474	WDR97	A6NE52	1622 aa		32.35	■■■□□ 2.77
ATG7-222	ENST00000470474	TDRD9	Q8NDG6	1382 aa	Known RBP	32.31	■■■□□ 2.76
ATG7-222	ENST00000470474	ARHGEF11	O15085	1522 aa		32.28	■■■□□ 2.76
ATG7-222	ENST00000470474	SNAPC4	Q5SXM2	1469 aa		32.2	■■■□□ 2.75
ATG7-222	ENST00000470474	FBLN2	P98095	1184 aa		32.16	■■■□□ 2.74
ATG7-222	ENST00000470474	GRIN2B	Q13224	1484 aa		32.13	■■■□□ 2.73
ATG7-222	ENST00000470474	MAGI1	Q96QZ7	1491 aa	Predicted RBP	32.13	■■■□□ 2.73
ATG7-222	ENST00000470474	PBRM1	Q86U86	1689 aa		32.08	■■■□□ 2.73
ATG7-222	ENST00000470474	ABCA10	Q8WWZ4	1543 aa		32.07	■■■□□ 2.72
ATG7-222	ENST00000470474	ABCA5	Q8WWZ7	1642 aa		32.04	■■■□□ 2.72
ATG7-222	ENST00000470474	GAPVD1	Q14C86	1478 aa		32.03	■■■□□ 2.72
ATG7-222	ENST00000470474	CLASP1	Q7Z460	1538 aa		32.02	■■■□□ 2.72
ATG7-222	ENST00000470474	SYNJ2	O15056	1496 aa		32.02	■■■□□ 2.72
ATG7-222	ENST00000470474	BIVM-ERCC5	R4GMW8	1640 aa		32	■■■□□ 2.71
ATG7-222	ENST00000470474	SYNJ1	O43426	1573 aa		31.99	■■■□□ 2.71
ATG7-222	ENST00000470474	CHMP7	Q8WUX9	453 aa	Predicted RBP	31.98	■■■□□ 2.71
ATG7-222	ENST00000470474	ARAP1	Q96P48	1450 aa		31.97	■■■□□ 2.71
ATG7-222	ENST00000470474	TOP2B	Q02880	1626 aa		31.97	■■■□□ 2.71
ATG7-222	ENST00000470474	WRN	Q14191	1432 aa	Predicted RBP eCLIP	31.93	■■■□□ 2.7
ATG7-222	ENST00000470474	CYB5RL	Q6IPT4	315 aa		31.92	■■■□□ 2.7
ATG7-222	ENST00000470474	ADAMTS12	P58397	1594 aa		31.78	■■■□□ 2.68
ATG7-222	ENST00000470474	GRIN2A	Q12879	1464 aa		31.73	■■■□□ 2.67
ATG7-222	ENST00000470474	ERICH3	Q5RHP9	1530 aa		31.68	■■■□□ 2.66
ATG7-222	ENST00000470474	FHAD1	B1AJZ9	1412 aa		31.64	■■■□□ 2.66
ATG7-222	ENST00000470474	NUP160	Q12769	1436 aa		31.63	■■■□□ 2.65
ATG7-222	ENST00000470474	CEP170	Q5SW79	1584 aa		31.63	■■■□□ 2.65
ATG7-222	ENST00000470474	ERCC6L2	Q5T890	1561 aa		31.51	■■■□□ 2.63
ATG7-222	ENST00000470474	SHROOM2	Q13796	1616 aa		31.5	■■■□□ 2.63
ATG7-222	ENST00000470474	TRH	P20396	242 aa	Predicted RBP	31.49	■■■□□ 2.63
ATG7-222	ENST00000470474	RUSC2	Q8N2Y8	1516 aa		31.34	■■■□□ 2.61
ATG7-222	ENST00000470474	KIF27	Q86VH2	1401 aa		31.3	■■■□□ 2.6
ATG7-222	ENST00000470474	CUL7	Q14999	1698 aa		31.27	■■■□□ 2.6
ATG7-222	ENST00000470474	PRG4	Q92954	1404 aa	Predicted RBP	31.26	■■■□□ 2.6

Retrieved 100 of 20,778 RNA–protein pairs in 285.9 ms