RNA–Protein interactions for RNA: ENST00000470433.1

SCUBE1-205, Transcript of signal peptide, CUB domain and EGF like domain containing 1, humanhuman

TSL 3

Gene SCUBE1, Length 544 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE1-205ENST00000470433 NISCHQ9Y2I1 1504 aa30.32■■■□□ 2.44
SCUBE1-205ENST00000470433 ABCC9O60706 1549 aa27.31■■□□□ 1.96
SCUBE1-205ENST00000470433 CCDC180Q9P1Z9 1646 aa27.3■■□□□ 1.96
SCUBE1-205ENST00000470433 RB1CC1Q8TDY2 1594 aa25.99■■□□□ 1.75
SCUBE1-205ENST00000470433 NACADO15069 1562 aa25.78■■□□□ 1.72
SCUBE1-205ENST00000470433 DCAF8L2P0C7V8 631 aa25.6■■□□□ 1.69
SCUBE1-205ENST00000470433 DNAJC5BQ9UF47 199 aa25.59■■□□□ 1.69
SCUBE1-205ENST00000470433 UNC13AQ9UPW8 1703 aa25.46■■□□□ 1.67
SCUBE1-205ENST00000470433 PABPN1Q86U42 306 aaKnown RBP eCLIP25.38■■□□□ 1.65
SCUBE1-205ENST00000470433 MYO15BQ96JP2 1530 aa25.37■■□□□ 1.65
SCUBE1-205ENST00000470433 BICRAQ9NZM4 1560 aa25.22■■□□□ 1.63
SCUBE1-205ENST00000470433 ZCCHC6Q5VYS8 1495 aaKnown RBP25.13■■□□□ 1.61
SCUBE1-205ENST00000470433 DCAF1Q9Y4B6 1507 aa25.03■■□□□ 1.6
SCUBE1-205ENST00000470433 SCRIBQ14160 1630 aa24.88■■□□□ 1.57
SCUBE1-205ENST00000470433 SHROOM4Q9ULL8 1493 aa24.87■■□□□ 1.57
SCUBE1-205ENST00000470433 CC2D2AQ9P2K1 1620 aa24.68■■□□□ 1.54
SCUBE1-205ENST00000470433 EIF4G1Q04637 1599 aaKnown RBP24.61■■□□□ 1.53
SCUBE1-205ENST00000470433 CECR2Q9BXF3 1484 aa24.6■■□□□ 1.53
SCUBE1-205ENST00000470433 NCAPD3P42695 1498 aa23.75■■□□□ 1.39
SCUBE1-205ENST00000470433 SMARCA4P51532 1647 aa23.7■■□□□ 1.39
SCUBE1-205ENST00000470433 ATAD2BQ9ULI0 1458 aa23.69■■□□□ 1.38
SCUBE1-205ENST00000470433 SMARCA2P51531 1590 aa23.66■■□□□ 1.38
SCUBE1-205ENST00000470433 HMGXB3Q12766 1538 aa23.63■■□□□ 1.37
SCUBE1-205ENST00000470433 ERCC6Q03468 1493 aa23.6■■□□□ 1.37
SCUBE1-205ENST00000470433 BAZ1AQ9NRL2 1556 aaPredicted RBP23.56■■□□□ 1.36
SCUBE1-205ENST00000470433 CUX2O14529 1486 aa23.56■■□□□ 1.36
SCUBE1-205ENST00000470433 DNAJC5Q9H3Z4 198 aa23.55■■□□□ 1.36
SCUBE1-205ENST00000470433 BAZ1BQ9UIG0 1483 aaKnown RBP23.49■■□□□ 1.35
SCUBE1-205ENST00000470433 NESP48681 1621 aa23.44■■□□□ 1.34
SCUBE1-205ENST00000470433 PEG3Q9GZU2 1588 aa23.44■■□□□ 1.34
SCUBE1-205ENST00000470433 MROH2BQ7Z745 1585 aa23.37■■□□□ 1.33
SCUBE1-205ENST00000470433 LAMC3Q9Y6N6 1575 aa23.29■■□□□ 1.32
SCUBE1-205ENST00000470433 THOC2Q8NI27 1593 aaKnown RBP23.26■■□□□ 1.31
SCUBE1-205ENST00000470433 KIF21AQ7Z4S6 1674 aa23.2■■□□□ 1.3
SCUBE1-205ENST00000470433 PDS5BQ9NTI5 1447 aa23.12■■□□□ 1.29
SCUBE1-205ENST00000470433 WIZO95785 1651 aa23.12■■□□□ 1.29
SCUBE1-205ENST00000470433 CADPSQ9ULU8 1353 aa23.03■■□□□ 1.28
SCUBE1-205ENST00000470433 MRC2Q9UBG0 1479 aa22.95■■□□□ 1.26
SCUBE1-205ENST00000470433 WDR62O43379 1518 aa22.9■■□□□ 1.26
SCUBE1-205ENST00000470433 CEP164Q9UPV0 1460 aa22.85■■□□□ 1.25
SCUBE1-205ENST00000470433 RSF1Q96T23 1441 aaPredicted RBP22.83■■□□□ 1.25
SCUBE1-205ENST00000470433 TOP2AP11388 1531 aaKnown RBP22.82■■□□□ 1.24
SCUBE1-205ENST00000470433 FANCD2Q9BXW9 1451 aa22.8■■□□□ 1.24
SCUBE1-205ENST00000470433 CFTRP13569 1480 aa22.77■■□□□ 1.24
SCUBE1-205ENST00000470433 PRDM2Q13029 1718 aa22.65■■□□□ 1.22
SCUBE1-205ENST00000470433 URB2Q14146 1524 aaKnown RBP22.62■■□□□ 1.21
SCUBE1-205ENST00000470433 TRIM41Q8WV44 630 aa22.55■■□□□ 1.2
SCUBE1-205ENST00000470433 CCDC88BA6NC98 1476 aa22.52■■□□□ 1.2
SCUBE1-205ENST00000470433 OSCARQ8IYS5 282 aa22.42■■□□□ 1.18
SCUBE1-205ENST00000470433 IFT140Q96RY7 1462 aa22.38■■□□□ 1.17
SCUBE1-205ENST00000470433 TOPBP1Q92547 1522 aa22.37■■□□□ 1.17
SCUBE1-205ENST00000470433 ZNF608Q9ULD9 1512 aaPredicted RBP22.35■■□□□ 1.17
SCUBE1-205ENST00000470433 ABCC8Q09428 1581 aa22.31■■□□□ 1.16
SCUBE1-205ENST00000470433 DNMBPQ6XZF7 1577 aa22.31■■□□□ 1.16
SCUBE1-205ENST00000470433 EIF4G3O43432 1585 aaKnown RBP22.28■■□□□ 1.16
SCUBE1-205ENST00000470433 RIMBP3CA6NJZ7 1639 aa22.23■■□□□ 1.15
SCUBE1-205ENST00000470433 RIMBP3BA6NNM3 1639 aa22.23■■□□□ 1.15
SCUBE1-205ENST00000470433 RIMBP3Q9UFD9 1639 aa22.23■■□□□ 1.15
SCUBE1-205ENST00000470433 TARBP1Q13395 1621 aaKnown RBP22.2■■□□□ 1.14
SCUBE1-205ENST00000470433 CHD1O14646 1710 aa22.15■■□□□ 1.14
SCUBE1-205ENST00000470433 POLA1P09884 1462 aaPredicted RBP22.13■■□□□ 1.13
SCUBE1-205ENST00000470433 ARHGEF11O15085 1522 aa22.12■■□□□ 1.13
SCUBE1-205ENST00000470433 AQRO60306 1485 aaKnown RBP eCLIP22.12■■□□□ 1.13
SCUBE1-205ENST00000470433 RAD54L2Q9Y4B4 1467 aa22.05■■□□□ 1.12
SCUBE1-205ENST00000470433 SOGA1O94964 1423 aa22.01■■□□□ 1.11
SCUBE1-205ENST00000470433 FBLN2P98095 1184 aa22■■□□□ 1.11
SCUBE1-205ENST00000470433 FGD5Q6ZNL6 1462 aa22■■□□□ 1.11
SCUBE1-205ENST00000470433 TDRD9Q8NDG6 1382 aaKnown RBP21.98■■□□□ 1.11
SCUBE1-205ENST00000470433 CUX1P39880 1505 aa21.97■■□□□ 1.11
SCUBE1-205ENST00000470433 WDR97A6NE52 1622 aa21.97■■□□□ 1.11
SCUBE1-205ENST00000470433 SNAPC4Q5SXM2 1469 aa21.94■■□□□ 1.1
SCUBE1-205ENST00000470433 CYB5RLQ6IPT4 315 aa21.92■■□□□ 1.1
SCUBE1-205ENST00000470433 ARAP1Q96P48 1450 aa21.9■■□□□ 1.1
SCUBE1-205ENST00000470433 MAGI1Q96QZ7 1491 aaPredicted RBP21.86■■□□□ 1.09
SCUBE1-205ENST00000470433 GRIN2BQ13224 1484 aa21.85■■□□□ 1.09
SCUBE1-205ENST00000470433 SYNJ1O43426 1573 aa21.84■■□□□ 1.09
SCUBE1-205ENST00000470433 PBRM1Q86U86 1689 aa21.84■■□□□ 1.09
SCUBE1-205ENST00000470433 CLASP1Q7Z460 1538 aa21.84■■□□□ 1.09
SCUBE1-205ENST00000470433 CHMP7Q8WUX9 453 aaPredicted RBP21.81■■□□□ 1.08
SCUBE1-205ENST00000470433 SUPT5HO00267 1087 aaKnown RBP21.79■■□□□ 1.08
SCUBE1-205ENST00000470433 SYNJ2O15056 1496 aa21.78■■□□□ 1.08
SCUBE1-205ENST00000470433 GAPVD1Q14C86 1478 aa21.77■■□□□ 1.07
SCUBE1-205ENST00000470433 ABCA5Q8WWZ7 1642 aa21.74■■□□□ 1.07
SCUBE1-205ENST00000470433 ABCA10Q8WWZ4 1543 aa21.73■■□□□ 1.07
SCUBE1-205ENST00000470433 TRHP20396 242 aaPredicted RBP21.72■■□□□ 1.07
SCUBE1-205ENST00000470433 AEBP2Q6ZN18 517 aaPredicted RBP21.72■■□□□ 1.07
SCUBE1-205ENST00000470433 BIVM-ERCC5R4GMW8 1640 aa21.64■■□□□ 1.05
SCUBE1-205ENST00000470433 WRNQ14191 1432 aaPredicted RBP eCLIP21.63■■□□□ 1.05
SCUBE1-205ENST00000470433 TOP2BQ02880 1626 aa21.61■■□□□ 1.05
SCUBE1-205ENST00000470433 ADAMTS12P58397 1594 aa21.6■■□□□ 1.05
SCUBE1-205ENST00000470433 GRIN2AQ12879 1464 aa21.58■■□□□ 1.04
SCUBE1-205ENST00000470433 CEP170Q5SW79 1584 aa21.53■■□□□ 1.04
SCUBE1-205ENST00000470433 ERCC6L2Q5T890 1561 aa21.5■■□□□ 1.03
SCUBE1-205ENST00000470433 NUP160Q12769 1436 aa21.48■■□□□ 1.03
SCUBE1-205ENST00000470433 FHAD1B1AJZ9 1412 aa21.47■■□□□ 1.03
SCUBE1-205ENST00000470433 ERICH3Q5RHP9 1530 aa21.47■■□□□ 1.03
SCUBE1-205ENST00000470433 SHROOM2Q13796 1616 aa21.44■■□□□ 1.02
SCUBE1-205ENST00000470433 RUSC2Q8N2Y8 1516 aa21.29■■□□□ 1
SCUBE1-205ENST00000470433 PRG4Q92954 1404 aaPredicted RBP21.29■■□□□ 1
SCUBE1-205ENST00000470433 JPH4Q96JJ6 628 aa21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms