RNA–Protein interactions for RNA: ENST00000470365.5

C4A-251, Transcript of complement C4A (Rodgers blood group), humanhuman

TSL 3

Gene C4A, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4A-251ENST00000470365 NISCHQ9Y2I1 1504 aa36.91■■■■□ 3.5
C4A-251ENST00000470365 CCDC180Q9P1Z9 1646 aa33.2■■■□□ 2.91
C4A-251ENST00000470365 ABCC9O60706 1549 aa33.06■■■□□ 2.88
C4A-251ENST00000470365 RB1CC1Q8TDY2 1594 aa31.57■■■□□ 2.64
C4A-251ENST00000470365 NACADO15069 1562 aa31.34■■■□□ 2.61
C4A-251ENST00000470365 DCAF8L2P0C7V8 631 aa31.22■■■□□ 2.59
C4A-251ENST00000470365 MYO15BQ96JP2 1530 aa30.88■■■□□ 2.53
C4A-251ENST00000470365 UNC13AQ9UPW8 1703 aa30.79■■■□□ 2.52
C4A-251ENST00000470365 PABPN1Q86U42 306 aaKnown RBP eCLIP30.73■■■□□ 2.51
C4A-251ENST00000470365 DNAJC5BQ9UF47 199 aa30.73■■■□□ 2.51
C4A-251ENST00000470365 ZCCHC6Q5VYS8 1495 aaKnown RBP30.62■■■□□ 2.49
C4A-251ENST00000470365 DCAF1Q9Y4B6 1507 aa30.51■■■□□ 2.47
C4A-251ENST00000470365 BICRAQ9NZM4 1560 aa30.49■■■□□ 2.47
C4A-251ENST00000470365 SCRIBQ14160 1630 aa30.24■■■□□ 2.43
C4A-251ENST00000470365 SHROOM4Q9ULL8 1493 aa30.24■■■□□ 2.43
C4A-251ENST00000470365 CC2D2AQ9P2K1 1620 aa29.87■■■□□ 2.37
C4A-251ENST00000470365 EIF4G1Q04637 1599 aaKnown RBP29.82■■■□□ 2.36
C4A-251ENST00000470365 CECR2Q9BXF3 1484 aa29.79■■■□□ 2.36
C4A-251ENST00000470365 NCAPD3P42695 1498 aa28.85■■■□□ 2.21
C4A-251ENST00000470365 SMARCA4P51532 1647 aa28.83■■■□□ 2.21
C4A-251ENST00000470365 SMARCA2P51531 1590 aa28.81■■■□□ 2.2
C4A-251ENST00000470365 ATAD2BQ9ULI0 1458 aa28.78■■■□□ 2.2
C4A-251ENST00000470365 BAZ1AQ9NRL2 1556 aaPredicted RBP28.73■■■□□ 2.19
C4A-251ENST00000470365 HMGXB3Q12766 1538 aa28.72■■■□□ 2.19
C4A-251ENST00000470365 ERCC6Q03468 1493 aa28.66■■■□□ 2.18
C4A-251ENST00000470365 BAZ1BQ9UIG0 1483 aaKnown RBP28.6■■■□□ 2.17
C4A-251ENST00000470365 CUX2O14529 1486 aa28.51■■■□□ 2.15
C4A-251ENST00000470365 PEG3Q9GZU2 1588 aa28.5■■■□□ 2.15
C4A-251ENST00000470365 MROH2BQ7Z745 1585 aa28.41■■■□□ 2.14
C4A-251ENST00000470365 NESP48681 1621 aa28.36■■■□□ 2.13
C4A-251ENST00000470365 DNAJC5Q9H3Z4 198 aa28.29■■■□□ 2.12
C4A-251ENST00000470365 LAMC3Q9Y6N6 1575 aa28.28■■■□□ 2.12
C4A-251ENST00000470365 PDS5BQ9NTI5 1447 aa28.12■■■□□ 2.09
C4A-251ENST00000470365 WIZO95785 1651 aa28.12■■■□□ 2.09
C4A-251ENST00000470365 THOC2Q8NI27 1593 aaKnown RBP28.11■■■□□ 2.09
C4A-251ENST00000470365 KIF21AQ7Z4S6 1674 aa28.1■■■□□ 2.09
C4A-251ENST00000470365 CADPSQ9ULU8 1353 aa27.99■■■□□ 2.07
C4A-251ENST00000470365 MRC2Q9UBG0 1479 aa27.86■■■□□ 2.05
C4A-251ENST00000470365 RSF1Q96T23 1441 aaPredicted RBP27.84■■■□□ 2.05
C4A-251ENST00000470365 TOP2AP11388 1531 aaKnown RBP27.82■■■□□ 2.04
C4A-251ENST00000470365 CEP164Q9UPV0 1460 aa27.8■■■□□ 2.04
C4A-251ENST00000470365 WDR62O43379 1518 aa27.76■■■□□ 2.03
C4A-251ENST00000470365 FANCD2Q9BXW9 1451 aa27.72■■■□□ 2.03
C4A-251ENST00000470365 CFTRP13569 1480 aa27.68■■■□□ 2.02
C4A-251ENST00000470365 PRDM2Q13029 1718 aa27.56■■■□□ 2
C4A-251ENST00000470365 URB2Q14146 1524 aaKnown RBP27.43■■□□□ 1.98
C4A-251ENST00000470365 CCDC88BA6NC98 1476 aa27.42■■□□□ 1.98
C4A-251ENST00000470365 IFT140Q96RY7 1462 aa27.21■■□□□ 1.95
C4A-251ENST00000470365 TRIM41Q8WV44 630 aa27.21■■□□□ 1.95
C4A-251ENST00000470365 ABCC8Q09428 1581 aa27.21■■□□□ 1.95
C4A-251ENST00000470365 OSCARQ8IYS5 282 aa27.19■■□□□ 1.94
C4A-251ENST00000470365 TOPBP1Q92547 1522 aa27.19■■□□□ 1.94
C4A-251ENST00000470365 DNMBPQ6XZF7 1577 aa27.14■■□□□ 1.94
C4A-251ENST00000470365 ZNF608Q9ULD9 1512 aaPredicted RBP27.06■■□□□ 1.92
C4A-251ENST00000470365 EIF4G3O43432 1585 aaKnown RBP27.03■■□□□ 1.92
C4A-251ENST00000470365 POLA1P09884 1462 aaPredicted RBP26.91■■□□□ 1.9
C4A-251ENST00000470365 TARBP1Q13395 1621 aaKnown RBP26.9■■□□□ 1.9
C4A-251ENST00000470365 AQRO60306 1485 aaKnown RBP eCLIP26.85■■□□□ 1.89
C4A-251ENST00000470365 RIMBP3CA6NJZ7 1639 aa26.83■■□□□ 1.89
C4A-251ENST00000470365 RIMBP3BA6NNM3 1639 aa26.83■■□□□ 1.89
C4A-251ENST00000470365 RIMBP3Q9UFD9 1639 aa26.83■■□□□ 1.89
C4A-251ENST00000470365 CHD1O14646 1710 aa26.82■■□□□ 1.88
C4A-251ENST00000470365 SOGA1O94964 1423 aa26.8■■□□□ 1.88
C4A-251ENST00000470365 RAD54L2Q9Y4B4 1467 aa26.78■■□□□ 1.88
C4A-251ENST00000470365 FGD5Q6ZNL6 1462 aa26.77■■□□□ 1.88
C4A-251ENST00000470365 FBLN2P98095 1184 aa26.77■■□□□ 1.88
C4A-251ENST00000470365 WDR97A6NE52 1622 aa26.76■■□□□ 1.87
C4A-251ENST00000470365 SUPT5HO00267 1087 aaKnown RBP26.76■■□□□ 1.87
C4A-251ENST00000470365 ARHGEF11O15085 1522 aa26.75■■□□□ 1.87
C4A-251ENST00000470365 CUX1P39880 1505 aa26.71■■□□□ 1.87
C4A-251ENST00000470365 TDRD9Q8NDG6 1382 aaKnown RBP26.71■■□□□ 1.87
C4A-251ENST00000470365 SNAPC4Q5SXM2 1469 aa26.65■■□□□ 1.86
C4A-251ENST00000470365 MAGI1Q96QZ7 1491 aaPredicted RBP26.6■■□□□ 1.85
C4A-251ENST00000470365 GRIN2BQ13224 1484 aa26.59■■□□□ 1.85
C4A-251ENST00000470365 CHMP7Q8WUX9 453 aaPredicted RBP26.57■■□□□ 1.84
C4A-251ENST00000470365 SYNJ1O43426 1573 aa26.55■■□□□ 1.84
C4A-251ENST00000470365 PBRM1Q86U86 1689 aa26.54■■□□□ 1.84
C4A-251ENST00000470365 CYB5RLQ6IPT4 315 aa26.54■■□□□ 1.84
C4A-251ENST00000470365 SYNJ2O15056 1496 aa26.49■■□□□ 1.83
C4A-251ENST00000470365 GAPVD1Q14C86 1478 aa26.49■■□□□ 1.83
C4A-251ENST00000470365 ABCA10Q8WWZ4 1543 aa26.46■■□□□ 1.83
C4A-251ENST00000470365 ARAP1Q96P48 1450 aa26.46■■□□□ 1.83
C4A-251ENST00000470365 CLASP1Q7Z460 1538 aa26.44■■□□□ 1.82
C4A-251ENST00000470365 ABCA5Q8WWZ7 1642 aa26.43■■□□□ 1.82
C4A-251ENST00000470365 WRNQ14191 1432 aaPredicted RBP eCLIP26.4■■□□□ 1.82
C4A-251ENST00000470365 BIVM-ERCC5R4GMW8 1640 aa26.37■■□□□ 1.81
C4A-251ENST00000470365 TOP2BQ02880 1626 aa26.36■■□□□ 1.81
C4A-251ENST00000470365 TRHP20396 242 aaPredicted RBP26.32■■□□□ 1.8
C4A-251ENST00000470365 ADAMTS12P58397 1594 aa26.25■■□□□ 1.79
C4A-251ENST00000470365 GRIN2AQ12879 1464 aa26.23■■□□□ 1.79
C4A-251ENST00000470365 FHAD1B1AJZ9 1412 aa26.16■■□□□ 1.78
C4A-251ENST00000470365 ERICH3Q5RHP9 1530 aa26.16■■□□□ 1.78
C4A-251ENST00000470365 CEP170Q5SW79 1584 aa26.12■■□□□ 1.77
C4A-251ENST00000470365 NUP160Q12769 1436 aa26.1■■□□□ 1.77
C4A-251ENST00000470365 SHROOM2Q13796 1616 aa25.99■■□□□ 1.75
C4A-251ENST00000470365 ERCC6L2Q5T890 1561 aa25.99■■□□□ 1.75
C4A-251ENST00000470365 KIF27Q86VH2 1401 aa25.88■■□□□ 1.73
C4A-251ENST00000470365 RUSC2Q8N2Y8 1516 aa25.88■■□□□ 1.73
C4A-251ENST00000470365 PRG4Q92954 1404 aaPredicted RBP25.88■■□□□ 1.73
C4A-251ENST00000470365 CUL7Q14999 1698 aa25.87■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms