RNA–Protein interactions for RNA: ENST00000470317.2

VSIR-202, Transcript of V-set immunoregulatory receptor, humanhuman

TSL 5

Gene VSIR, Length 758 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSIR-202ENST00000470317 NISCHQ9Y2I1 1504 aa42.81■■■■■ 4.44
VSIR-202ENST00000470317 ABCC9O60706 1549 aa38.82■■■■□ 3.8
VSIR-202ENST00000470317 CCDC180Q9P1Z9 1646 aa38.66■■■■□ 3.78
VSIR-202ENST00000470317 RB1CC1Q8TDY2 1594 aa36.87■■■■□ 3.49
VSIR-202ENST00000470317 DNAJC5BQ9UF47 199 aa36.61■■■■□ 3.45
VSIR-202ENST00000470317 NACADO15069 1562 aa36.55■■■■□ 3.44
VSIR-202ENST00000470317 UNC13AQ9UPW8 1703 aa36.12■■■■□ 3.37
VSIR-202ENST00000470317 DCAF8L2P0C7V8 631 aa36.03■■■■□ 3.36
VSIR-202ENST00000470317 PABPN1Q86U42 306 aaKnown RBP eCLIP35.99■■■■□ 3.35
VSIR-202ENST00000470317 MYO15BQ96JP2 1530 aa35.98■■■■□ 3.35
VSIR-202ENST00000470317 BICRAQ9NZM4 1560 aa35.85■■■■□ 3.33
VSIR-202ENST00000470317 ZCCHC6Q5VYS8 1495 aaKnown RBP35.47■■■■□ 3.27
VSIR-202ENST00000470317 DCAF1Q9Y4B6 1507 aa35.41■■■■□ 3.26
VSIR-202ENST00000470317 SHROOM4Q9ULL8 1493 aa35.37■■■■□ 3.25
VSIR-202ENST00000470317 SCRIBQ14160 1630 aa35.13■■■■□ 3.21
VSIR-202ENST00000470317 CC2D2AQ9P2K1 1620 aa35.1■■■■□ 3.21
VSIR-202ENST00000470317 CECR2Q9BXF3 1484 aa35.02■■■■□ 3.2
VSIR-202ENST00000470317 EIF4G1Q04637 1599 aaKnown RBP34.97■■■■□ 3.19
VSIR-202ENST00000470317 DNAJC5Q9H3Z4 198 aa33.86■■■■□ 3.01
VSIR-202ENST00000470317 NCAPD3P42695 1498 aa33.71■■■□□ 2.99
VSIR-202ENST00000470317 CUX2O14529 1486 aa33.64■■■□□ 2.98
VSIR-202ENST00000470317 ATAD2BQ9ULI0 1458 aa33.56■■■□□ 2.96
VSIR-202ENST00000470317 ERCC6Q03468 1493 aa33.53■■■□□ 2.96
VSIR-202ENST00000470317 SMARCA4P51532 1647 aa33.51■■■□□ 2.96
VSIR-202ENST00000470317 HMGXB3Q12766 1538 aa33.51■■■□□ 2.95
VSIR-202ENST00000470317 SMARCA2P51531 1590 aa33.48■■■□□ 2.95
VSIR-202ENST00000470317 BAZ1AQ9NRL2 1556 aaPredicted RBP33.28■■■□□ 2.92
VSIR-202ENST00000470317 NESP48681 1621 aa33.28■■■□□ 2.92
VSIR-202ENST00000470317 BAZ1BQ9UIG0 1483 aaKnown RBP33.23■■■□□ 2.91
VSIR-202ENST00000470317 PEG3Q9GZU2 1588 aa33.21■■■□□ 2.91
VSIR-202ENST00000470317 THOC2Q8NI27 1593 aaKnown RBP33.1■■■□□ 2.89
VSIR-202ENST00000470317 LAMC3Q9Y6N6 1575 aa33.04■■■□□ 2.88
VSIR-202ENST00000470317 MROH2BQ7Z745 1585 aa32.98■■■□□ 2.87
VSIR-202ENST00000470317 KIF21AQ7Z4S6 1674 aa32.91■■■□□ 2.86
VSIR-202ENST00000470317 PDS5BQ9NTI5 1447 aa32.78■■■□□ 2.84
VSIR-202ENST00000470317 CADPSQ9ULU8 1353 aa32.63■■■□□ 2.81
VSIR-202ENST00000470317 MRC2Q9UBG0 1479 aa32.58■■■□□ 2.81
VSIR-202ENST00000470317 WIZO95785 1651 aa32.58■■■□□ 2.81
VSIR-202ENST00000470317 WDR62O43379 1518 aa32.55■■■□□ 2.8
VSIR-202ENST00000470317 CEP164Q9UPV0 1460 aa32.38■■■□□ 2.77
VSIR-202ENST00000470317 FANCD2Q9BXW9 1451 aa32.29■■■□□ 2.76
VSIR-202ENST00000470317 CFTRP13569 1480 aa32.25■■■□□ 2.75
VSIR-202ENST00000470317 TRIM41Q8WV44 630 aa32.19■■■□□ 2.74
VSIR-202ENST00000470317 TOP2AP11388 1531 aaKnown RBP32.18■■■□□ 2.74
VSIR-202ENST00000470317 RSF1Q96T23 1441 aaPredicted RBP32.16■■■□□ 2.74
VSIR-202ENST00000470317 URB2Q14146 1524 aaKnown RBP32.08■■■□□ 2.73
VSIR-202ENST00000470317 PRDM2Q13029 1718 aa32.02■■■□□ 2.72
VSIR-202ENST00000470317 OSCARQ8IYS5 282 aa31.9■■■□□ 2.7
VSIR-202ENST00000470317 CCDC88BA6NC98 1476 aa31.74■■■□□ 2.67
VSIR-202ENST00000470317 IFT140Q96RY7 1462 aa31.74■■■□□ 2.67
VSIR-202ENST00000470317 ZNF608Q9ULD9 1512 aaPredicted RBP31.71■■■□□ 2.67
VSIR-202ENST00000470317 RIMBP3CA6NJZ7 1639 aa31.68■■■□□ 2.66
VSIR-202ENST00000470317 RIMBP3BA6NNM3 1639 aa31.68■■■□□ 2.66
VSIR-202ENST00000470317 RIMBP3Q9UFD9 1639 aa31.68■■■□□ 2.66
VSIR-202ENST00000470317 TOPBP1Q92547 1522 aa31.67■■■□□ 2.66
VSIR-202ENST00000470317 EIF4G3O43432 1585 aaKnown RBP31.6■■■□□ 2.65
VSIR-202ENST00000470317 ABCC8Q09428 1581 aa31.56■■■□□ 2.64
VSIR-202ENST00000470317 DNMBPQ6XZF7 1577 aa31.56■■■□□ 2.64
VSIR-202ENST00000470317 ARHGEF11O15085 1522 aa31.54■■■□□ 2.64
VSIR-202ENST00000470317 TARBP1Q13395 1621 aaKnown RBP31.46■■■□□ 2.63
VSIR-202ENST00000470317 CHD1O14646 1710 aa31.42■■■□□ 2.62
VSIR-202ENST00000470317 AQRO60306 1485 aaKnown RBP eCLIP31.33■■■□□ 2.613e-9■■■■■ 46.7
VSIR-202ENST00000470317 POLA1P09884 1462 aaPredicted RBP31.33■■■□□ 2.61
VSIR-202ENST00000470317 ARAP1Q96P48 1450 aa31.21■■■□□ 2.59
VSIR-202ENST00000470317 RAD54L2Q9Y4B4 1467 aa31.17■■■□□ 2.58
VSIR-202ENST00000470317 CYB5RLQ6IPT4 315 aa31.16■■■□□ 2.58
VSIR-202ENST00000470317 WDR97A6NE52 1622 aa31.15■■■□□ 2.58
VSIR-202ENST00000470317 SOGA1O94964 1423 aa31.1■■■□□ 2.57
VSIR-202ENST00000470317 FGD5Q6ZNL6 1462 aa31.08■■■□□ 2.57
VSIR-202ENST00000470317 FBLN2P98095 1184 aa31.08■■■□□ 2.57
VSIR-202ENST00000470317 TDRD9Q8NDG6 1382 aaKnown RBP31.07■■■□□ 2.56
VSIR-202ENST00000470317 SNAPC4Q5SXM2 1469 aa31.07■■■□□ 2.56
VSIR-202ENST00000470317 CLASP1Q7Z460 1538 aa31.05■■■□□ 2.56
VSIR-202ENST00000470317 CUX1P39880 1505 aa31.02■■■□□ 2.56
VSIR-202ENST00000470317 MAGI1Q96QZ7 1491 aaPredicted RBP30.99■■■□□ 2.55
VSIR-202ENST00000470317 SYNJ1O43426 1573 aa30.96■■■□□ 2.55
VSIR-202ENST00000470317 GRIN2BQ13224 1484 aa30.92■■■□□ 2.54
VSIR-202ENST00000470317 TRHP20396 242 aaPredicted RBP30.89■■■□□ 2.54
VSIR-202ENST00000470317 SYNJ2O15056 1496 aa30.88■■■□□ 2.53
VSIR-202ENST00000470317 PBRM1Q86U86 1689 aa30.87■■■□□ 2.53
VSIR-202ENST00000470317 CHMP7Q8WUX9 453 aaPredicted RBP30.84■■■□□ 2.53
VSIR-202ENST00000470317 ABCA5Q8WWZ7 1642 aa30.76■■■□□ 2.52
VSIR-202ENST00000470317 GAPVD1Q14C86 1478 aa30.76■■■□□ 2.52
VSIR-202ENST00000470317 ABCA10Q8WWZ4 1543 aa30.73■■■□□ 2.51
VSIR-202ENST00000470317 ADAMTS12P58397 1594 aa30.55■■■□□ 2.48
VSIR-202ENST00000470317 GRIN2AQ12879 1464 aa30.55■■■□□ 2.48
VSIR-202ENST00000470317 ERCC6L2Q5T890 1561 aa30.5■■■□□ 2.47
VSIR-202ENST00000470317 BIVM-ERCC5R4GMW8 1640 aa30.5■■■□□ 2.47
VSIR-202ENST00000470317 CEP170Q5SW79 1584 aa30.49■■■□□ 2.47
VSIR-202ENST00000470317 WRNQ14191 1432 aaPredicted RBP eCLIP30.48■■■□□ 2.47
VSIR-202ENST00000470317 NUP160Q12769 1436 aa30.47■■■□□ 2.47
VSIR-202ENST00000470317 TOP2BQ02880 1626 aa30.46■■■□□ 2.47
VSIR-202ENST00000470317 SHROOM2Q13796 1616 aa30.43■■■□□ 2.46
VSIR-202ENST00000470317 FHAD1B1AJZ9 1412 aa30.37■■■□□ 2.45
VSIR-202ENST00000470317 ERICH3Q5RHP9 1530 aa30.34■■■□□ 2.45
VSIR-202ENST00000470317 SUPT5HO00267 1087 aaKnown RBP30.34■■■□□ 2.45
VSIR-202ENST00000470317 AEBP2Q6ZN18 517 aaPredicted RBP30.21■■■□□ 2.43
VSIR-202ENST00000470317 KIF13AQ9H1H9 1805 aa30.19■■■□□ 2.42
VSIR-202ENST00000470317 RUSC2Q8N2Y8 1516 aa30.14■■■□□ 2.42
VSIR-202ENST00000470317 PRG4Q92954 1404 aaPredicted RBP30.13■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms