RNA–Protein interactions for RNA: ENST00000470280.1

LDHB-205, Transcript of lactate dehydrogenase B, humanhuman

TSL 2

Gene LDHB, Length 710 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHB-205ENST00000470280 NISCHQ9Y2I1 1504 aa25.79■■□□□ 1.72
LDHB-205ENST00000470280 AEBP2Q6ZN18 517 aaPredicted RBP24.39■■□□□ 1.49
LDHB-205ENST00000470280 CHIC1Q5VXU3 224 aa22.95■■□□□ 1.26
LDHB-205ENST00000470280 CCDC180Q9P1Z9 1646 aa22.92■■□□□ 1.26
LDHB-205ENST00000470280 ABCC9O60706 1549 aa22.62■■□□□ 1.21
LDHB-205ENST00000470280 RB1CC1Q8TDY2 1594 aa21.64■■□□□ 1.05
LDHB-205ENST00000470280 DCAF8L2P0C7V8 631 aa21.62■■□□□ 1.05
LDHB-205ENST00000470280 NACADO15069 1562 aa21.59■■□□□ 1.05
LDHB-205ENST00000470280 ZCCHC6Q5VYS8 1495 aaKnown RBP21.47■■□□□ 1.03
LDHB-205ENST00000470280 MYO15BQ96JP2 1530 aa21.42■■□□□ 1.02
LDHB-205ENST00000470280 DCAF1Q9Y4B6 1507 aa21.29■■□□□ 1
LDHB-205ENST00000470280 UNC13AQ9UPW8 1703 aa21.16■□□□□ 0.98
LDHB-205ENST00000470280 PABPN1Q86U42 306 aaKnown RBP eCLIP21.15■□□□□ 0.98
LDHB-205ENST00000470280 BICRAQ9NZM4 1560 aa21.06■□□□□ 0.96
LDHB-205ENST00000470280 SCRIBQ14160 1630 aa20.96■□□□□ 0.95
LDHB-205ENST00000470280 SENP3Q9H4L4 574 aaPredicted RBP20.96■□□□□ 0.95
LDHB-205ENST00000470280 DNAJC5BQ9UF47 199 aa20.94■□□□□ 0.94
LDHB-205ENST00000470280 SHROOM4Q9ULL8 1493 aa20.73■□□□□ 0.91
LDHB-205ENST00000470280 PHF23Q9BUL5 403 aaPredicted RBP20.63■□□□□ 0.89
LDHB-205ENST00000470280 EIF4G1Q04637 1599 aaKnown RBP20.48■□□□□ 0.87
LDHB-205ENST00000470280 CC2D2AQ9P2K1 1620 aa20.43■□□□□ 0.86
LDHB-205ENST00000470280 CECR2Q9BXF3 1484 aa20.31■□□□□ 0.84
LDHB-205ENST00000470280 SMARCA4P51532 1647 aa20.03■□□□□ 0.8
LDHB-205ENST00000470280 ATAD2BQ9ULI0 1458 aa19.98■□□□□ 0.79
LDHB-205ENST00000470280 BAZ1AQ9NRL2 1556 aaPredicted RBP19.96■□□□□ 0.79
LDHB-205ENST00000470280 NCAPD3P42695 1498 aa19.96■□□□□ 0.79
LDHB-205ENST00000470280 MROH2BQ7Z745 1585 aa19.91■□□□□ 0.78
LDHB-205ENST00000470280 SMARCA2P51531 1590 aa19.88■□□□□ 0.77
LDHB-205ENST00000470280 HMGXB3Q12766 1538 aa19.83■□□□□ 0.77
LDHB-205ENST00000470280 PEG3Q9GZU2 1588 aa19.83■□□□□ 0.76
LDHB-205ENST00000470280 BAZ1BQ9UIG0 1483 aaKnown RBP19.78■□□□□ 0.76
LDHB-205ENST00000470280 WIZO95785 1651 aa19.67■□□□□ 0.74
LDHB-205ENST00000470280 RSF1Q96T23 1441 aaPredicted RBP19.64■□□□□ 0.73
LDHB-205ENST00000470280 NESP48681 1621 aa19.57■□□□□ 0.72
LDHB-205ENST00000470280 FOXD1Q16676 465 aa19.51■□□□□ 0.71
LDHB-205ENST00000470280 ERCC6Q03468 1493 aa19.45■□□□□ 0.7
LDHB-205ENST00000470280 TOP2AP11388 1531 aaKnown RBP19.43■□□□□ 0.7
LDHB-205ENST00000470280 LAMC3Q9Y6N6 1575 aa19.41■□□□□ 0.7
LDHB-205ENST00000470280 CADPSQ9ULU8 1353 aa19.38■□□□□ 0.69
LDHB-205ENST00000470280 PDS5BQ9NTI5 1447 aa19.29■□□□□ 0.68
LDHB-205ENST00000470280 CUX2O14529 1486 aa19.28■□□□□ 0.68
LDHB-205ENST00000470280 KIF21AQ7Z4S6 1674 aa19.27■□□□□ 0.68
LDHB-205ENST00000470280 THOC2Q8NI27 1593 aaKnown RBP19.25■□□□□ 0.67
LDHB-205ENST00000470280 CCDC88BA6NC98 1476 aa19.24■□□□□ 0.67
LDHB-205ENST00000470280 CFTRP13569 1480 aa19.24■□□□□ 0.67
LDHB-205ENST00000470280 FANCD2Q9BXW9 1451 aa19.16■□□□□ 0.66
LDHB-205ENST00000470280 MRC2Q9UBG0 1479 aa19.13■□□□□ 0.65
LDHB-205ENST00000470280 CEP164Q9UPV0 1460 aa19.12■□□□□ 0.65
LDHB-205ENST00000470280 WDR62O43379 1518 aa19.06■□□□□ 0.64
LDHB-205ENST00000470280 SUPT5HO00267 1087 aaKnown RBP19.06■□□□□ 0.64
LDHB-205ENST00000470280 PRDM2Q13029 1718 aa19■□□□□ 0.63
LDHB-205ENST00000470280 URB2Q14146 1524 aaKnown RBP19■□□□□ 0.63
LDHB-205ENST00000470280 DNAJC5Q9H3Z4 198 aa18.87■□□□□ 0.61
LDHB-205ENST00000470280 TOPBP1Q92547 1522 aa18.84■□□□□ 0.61
LDHB-205ENST00000470280 DNMBPQ6XZF7 1577 aa18.79■□□□□ 0.6
LDHB-205ENST00000470280 ABCC8Q09428 1581 aa18.76■□□□□ 0.59
LDHB-205ENST00000470280 IFT140Q96RY7 1462 aa18.72■□□□□ 0.59
LDHB-205ENST00000470280 ZNF608Q9ULD9 1512 aaPredicted RBP18.71■□□□□ 0.59
LDHB-205ENST00000470280 POLA1P09884 1462 aaPredicted RBP18.68■□□□□ 0.58
LDHB-205ENST00000470280 CUX1P39880 1505 aa18.68■□□□□ 0.58
LDHB-205ENST00000470280 TARBP1Q13395 1621 aaKnown RBP18.64■□□□□ 0.57
LDHB-205ENST00000470280 RAD54L2Q9Y4B4 1467 aa18.63■□□□□ 0.57
LDHB-205ENST00000470280 FGD5Q6ZNL6 1462 aa18.62■□□□□ 0.57
LDHB-205ENST00000470280 SOGA1O94964 1423 aa18.59■□□□□ 0.57
LDHB-205ENST00000470280 EIF4G3O43432 1585 aaKnown RBP18.59■□□□□ 0.57
LDHB-205ENST00000470280 AQRO60306 1485 aaKnown RBP eCLIP18.58■□□□□ 0.57
LDHB-205ENST00000470280 TDRD9Q8NDG6 1382 aaKnown RBP18.54■□□□□ 0.56
LDHB-205ENST00000470280 WRNQ14191 1432 aaPredicted RBP eCLIP18.49■□□□□ 0.55
LDHB-205ENST00000470280 OSCARQ8IYS5 282 aa18.48■□□□□ 0.55
LDHB-205ENST00000470280 SYNJ1O43426 1573 aa18.47■□□□□ 0.55
LDHB-205ENST00000470280 WDR97A6NE52 1622 aa18.45■□□□□ 0.54
LDHB-205ENST00000470280 TOP2BQ02880 1626 aa18.45■□□□□ 0.54
LDHB-205ENST00000470280 MSH5O43196 834 aa18.44■□□□□ 0.54
LDHB-205ENST00000470280 BIVM-ERCC5R4GMW8 1640 aa18.44■□□□□ 0.54
LDHB-205ENST00000470280 POTEDQ86YR6 584 aa18.42■□□□□ 0.54
LDHB-205ENST00000470280 ABCA10Q8WWZ4 1543 aa18.41■□□□□ 0.54
LDHB-205ENST00000470280 SNAPC4Q5SXM2 1469 aa18.39■□□□□ 0.53
LDHB-205ENST00000470280 GRIN2BQ13224 1484 aa18.37■□□□□ 0.53
LDHB-205ENST00000470280 GAPVD1Q14C86 1478 aa18.37■□□□□ 0.53
LDHB-205ENST00000470280 CHD1O14646 1710 aa18.35■□□□□ 0.53
LDHB-205ENST00000470280 FBLN2P98095 1184 aa18.35■□□□□ 0.53
LDHB-205ENST00000470280 ABCA5Q8WWZ7 1642 aa18.34■□□□□ 0.53
LDHB-205ENST00000470280 MAGI1Q96QZ7 1491 aaPredicted RBP18.32■□□□□ 0.52
LDHB-205ENST00000470280 PBRM1Q86U86 1689 aa18.31■□□□□ 0.52
LDHB-205ENST00000470280 CHMP7Q8WUX9 453 aaPredicted RBP18.27■□□□□ 0.52
LDHB-205ENST00000470280 SYNJ2O15056 1496 aa18.26■□□□□ 0.51
LDHB-205ENST00000470280 PLPPR3Q6T4P5 718 aa18.26■□□□□ 0.51
LDHB-205ENST00000470280 PIAS4Q8N2W9 510 aaPredicted RBP18.22■□□□□ 0.51
LDHB-205ENST00000470280 TRIM41Q8WV44 630 aa18.22■□□□□ 0.51
LDHB-205ENST00000470280 RIMBP3CA6NJZ7 1639 aa18.21■□□□□ 0.51
LDHB-205ENST00000470280 RIMBP3BA6NNM3 1639 aa18.21■□□□□ 0.51
LDHB-205ENST00000470280 RIMBP3Q9UFD9 1639 aa18.21■□□□□ 0.51
LDHB-205ENST00000470280 ARHGEF11O15085 1522 aa18.2■□□□□ 0.5
LDHB-205ENST00000470280 CLASP1Q7Z460 1538 aa18.18■□□□□ 0.5
LDHB-205ENST00000470280 ADAMTS12P58397 1594 aa18.18■□□□□ 0.5
LDHB-205ENST00000470280 ERICH3Q5RHP9 1530 aa18.17■□□□□ 0.5
LDHB-205ENST00000470280 FHAD1B1AJZ9 1412 aa18.15■□□□□ 0.5
LDHB-205ENST00000470280 GRIN2AQ12879 1464 aa18.14■□□□□ 0.5
LDHB-205ENST00000470280 KIF27Q86VH2 1401 aa18.09■□□□□ 0.49
LDHB-205ENST00000470280 NUP160Q12769 1436 aa18.08■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms