RNA–Protein interactions for RNA: ENST00000470279.1

STRC-208, Transcript of stereocilin, humanhuman

TSL 4

Gene STRC, Length 569 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRC-208ENST00000470279 NISCHQ9Y2I1 1504 aa36.89■■■■□ 3.5
STRC-208ENST00000470279 ABCC9O60706 1549 aa34■■■■□ 3.03
STRC-208ENST00000470279 CCDC180Q9P1Z9 1646 aa33.42■■■□□ 2.94
STRC-208ENST00000470279 DNAJC5BQ9UF47 199 aa32.46■■■□□ 2.79
STRC-208ENST00000470279 RB1CC1Q8TDY2 1594 aa32.09■■■□□ 2.73
STRC-208ENST00000470279 NACADO15069 1562 aa31.72■■■□□ 2.67
STRC-208ENST00000470279 PABPN1Q86U42 306 aaKnown RBP eCLIP31.52■■■□□ 2.64
STRC-208ENST00000470279 UNC13AQ9UPW8 1703 aa31.43■■■□□ 2.62
STRC-208ENST00000470279 DCAF8L2P0C7V8 631 aa31.32■■■□□ 2.6
STRC-208ENST00000470279 BICRAQ9NZM4 1560 aa31.22■■■□□ 2.59
STRC-208ENST00000470279 MYO15BQ96JP2 1530 aa31.07■■■□□ 2.56
STRC-208ENST00000470279 SHROOM4Q9ULL8 1493 aa30.71■■■□□ 2.51
STRC-208ENST00000470279 CC2D2AQ9P2K1 1620 aa30.71■■■□□ 2.51
STRC-208ENST00000470279 CECR2Q9BXF3 1484 aa30.7■■■□□ 2.51
STRC-208ENST00000470279 EIF4G1Q04637 1599 aaKnown RBP30.49■■■□□ 2.47
STRC-208ENST00000470279 ZCCHC6Q5VYS8 1495 aaKnown RBP30.45■■■□□ 2.47
STRC-208ENST00000470279 DCAF1Q9Y4B6 1507 aa30.44■■■□□ 2.46
STRC-208ENST00000470279 SCRIBQ14160 1630 aa30.4■■■□□ 2.46
STRC-208ENST00000470279 DNAJC5Q9H3Z4 198 aa30.26■■■□□ 2.43
STRC-208ENST00000470279 CUX2O14529 1486 aa29.58■■■□□ 2.33
STRC-208ENST00000470279 ERCC6Q03468 1493 aa29.4■■■□□ 2.3
STRC-208ENST00000470279 NCAPD3P42695 1498 aa29.28■■■□□ 2.28
STRC-208ENST00000470279 ATAD2BQ9ULI0 1458 aa29.1■■■□□ 2.25
STRC-208ENST00000470279 NESP48681 1621 aa29.05■■■□□ 2.24
STRC-208ENST00000470279 HMGXB3Q12766 1538 aa29.03■■■□□ 2.24
STRC-208ENST00000470279 SMARCA2P51531 1590 aa29■■■□□ 2.23
STRC-208ENST00000470279 SMARCA4P51532 1647 aa28.94■■■□□ 2.22
STRC-208ENST00000470279 THOC2Q8NI27 1593 aaKnown RBP28.92■■■□□ 2.22
STRC-208ENST00000470279 BAZ1BQ9UIG0 1483 aaKnown RBP28.78■■■□□ 2.2
STRC-208ENST00000470279 LAMC3Q9Y6N6 1575 aa28.74■■■□□ 2.19
STRC-208ENST00000470279 KIF21AQ7Z4S6 1674 aa28.68■■■□□ 2.18
STRC-208ENST00000470279 BAZ1AQ9NRL2 1556 aaPredicted RBP28.67■■■□□ 2.18
STRC-208ENST00000470279 PEG3Q9GZU2 1588 aa28.67■■■□□ 2.18
STRC-208ENST00000470279 TRIM41Q8WV44 630 aa28.65■■■□□ 2.18
STRC-208ENST00000470279 PDS5BQ9NTI5 1447 aa28.56■■■□□ 2.16
STRC-208ENST00000470279 MROH2BQ7Z745 1585 aa28.42■■■□□ 2.14
STRC-208ENST00000470279 MRC2Q9UBG0 1479 aa28.39■■■□□ 2.13
STRC-208ENST00000470279 WDR62O43379 1518 aa28.36■■■□□ 2.13
STRC-208ENST00000470279 CADPSQ9ULU8 1353 aa28.34■■■□□ 2.13
STRC-208ENST00000470279 CEP164Q9UPV0 1460 aa28.13■■■□□ 2.09
STRC-208ENST00000470279 WIZO95785 1651 aa28.07■■■□□ 2.08
STRC-208ENST00000470279 OSCARQ8IYS5 282 aa28.06■■■□□ 2.08
STRC-208ENST00000470279 FANCD2Q9BXW9 1451 aa28.04■■■□□ 2.08
STRC-208ENST00000470279 CFTRP13569 1480 aa27.9■■■□□ 2.06
STRC-208ENST00000470279 URB2Q14146 1524 aaKnown RBP27.87■■■□□ 2.05
STRC-208ENST00000470279 RIMBP3CA6NJZ7 1639 aa27.85■■■□□ 2.05
STRC-208ENST00000470279 RIMBP3BA6NNM3 1639 aa27.85■■■□□ 2.05
STRC-208ENST00000470279 RIMBP3Q9UFD9 1639 aa27.85■■■□□ 2.05
STRC-208ENST00000470279 ARHGEF11O15085 1522 aa27.69■■■□□ 2.02
STRC-208ENST00000470279 TOP2AP11388 1531 aaKnown RBP27.67■■■□□ 2.02
STRC-208ENST00000470279 ZNF608Q9ULD9 1512 aaPredicted RBP27.63■■■□□ 2.01
STRC-208ENST00000470279 PRDM2Q13029 1718 aa27.63■■■□□ 2.01
STRC-208ENST00000470279 IFT140Q96RY7 1462 aa27.59■■■□□ 2.01
STRC-208ENST00000470279 RSF1Q96T23 1441 aaPredicted RBP27.58■■■□□ 2
STRC-208ENST00000470279 EIF4G3O43432 1585 aaKnown RBP27.47■■□□□ 1.99
STRC-208ENST00000470279 CYB5RLQ6IPT4 315 aa27.45■■□□□ 1.98
STRC-208ENST00000470279 TOPBP1Q92547 1522 aa27.45■■□□□ 1.98
STRC-208ENST00000470279 CHD1O14646 1710 aa27.39■■□□□ 1.98
STRC-208ENST00000470279 ARAP1Q96P48 1450 aa27.38■■□□□ 1.97
STRC-208ENST00000470279 TRHP20396 242 aaPredicted RBP27.34■■□□□ 1.97
STRC-208ENST00000470279 CCDC88BA6NC98 1476 aa27.33■■□□□ 1.97
STRC-208ENST00000470279 ABCC8Q09428 1581 aa27.31■■□□□ 1.96
STRC-208ENST00000470279 DNMBPQ6XZF7 1577 aa27.31■■□□□ 1.96
STRC-208ENST00000470279 TARBP1Q13395 1621 aaKnown RBP27.28■■□□□ 1.96
STRC-208ENST00000470279 AQRO60306 1485 aaKnown RBP eCLIP27.27■■□□□ 1.96
STRC-208ENST00000470279 FBLN2P98095 1184 aa27.17■■□□□ 1.94
STRC-208ENST00000470279 POLA1P09884 1462 aaPredicted RBP27.13■■□□□ 1.93
STRC-208ENST00000470279 CLASP1Q7Z460 1538 aa27.06■■□□□ 1.92
STRC-208ENST00000470279 RAD54L2Q9Y4B4 1467 aa27.03■■□□□ 1.92
STRC-208ENST00000470279 AEBP2Q6ZN18 517 aaPredicted RBP27.01■■□□□ 1.91
STRC-208ENST00000470279 SNAPC4Q5SXM2 1469 aa27■■□□□ 1.91
STRC-208ENST00000470279 TDRD9Q8NDG6 1382 aaKnown RBP26.99■■□□□ 1.91
STRC-208ENST00000470279 SYNJ1O43426 1573 aa26.96■■□□□ 1.91
STRC-208ENST00000470279 SOGA1O94964 1423 aa26.95■■□□□ 1.9
STRC-208ENST00000470279 WDR97A6NE52 1622 aa26.94■■□□□ 1.9
STRC-208ENST00000470279 MAGI1Q96QZ7 1491 aaPredicted RBP26.89■■□□□ 1.9
STRC-208ENST00000470279 CHMP7Q8WUX9 453 aaPredicted RBP26.87■■□□□ 1.89
STRC-208ENST00000470279 FGD5Q6ZNL6 1462 aa26.87■■□□□ 1.89
STRC-208ENST00000470279 SYNJ2O15056 1496 aa26.81■■□□□ 1.88
STRC-208ENST00000470279 GRIN2BQ13224 1484 aa26.81■■□□□ 1.88
STRC-208ENST00000470279 GAPVD1Q14C86 1478 aa26.78■■□□□ 1.88
STRC-208ENST00000470279 CUX1P39880 1505 aa26.75■■□□□ 1.87
STRC-208ENST00000470279 PBRM1Q86U86 1689 aa26.72■■□□□ 1.87
STRC-208ENST00000470279 ERCC6L2Q5T890 1561 aa26.58■■□□□ 1.85
STRC-208ENST00000470279 ABCA5Q8WWZ7 1642 aa26.57■■□□□ 1.84
STRC-208ENST00000470279 ABCA10Q8WWZ4 1543 aa26.53■■□□□ 1.84
STRC-208ENST00000470279 GRIN2AQ12879 1464 aa26.49■■□□□ 1.83
STRC-208ENST00000470279 CEP170Q5SW79 1584 aa26.48■■□□□ 1.83
STRC-208ENST00000470279 KIF13AQ9H1H9 1805 aa26.43■■□□□ 1.82
STRC-208ENST00000470279 ADAMTS12P58397 1594 aa26.42■■□□□ 1.82
STRC-208ENST00000470279 NUP160Q12769 1436 aa26.42■■□□□ 1.82
STRC-208ENST00000470279 SHROOM2Q13796 1616 aa26.41■■□□□ 1.82
STRC-208ENST00000470279 FHAD1B1AJZ9 1412 aa26.27■■□□□ 1.8
STRC-208ENST00000470279 WRNQ14191 1432 aaPredicted RBP eCLIP26.25■■□□□ 1.79
STRC-208ENST00000470279 PRG4Q92954 1404 aaPredicted RBP26.2■■□□□ 1.78
STRC-208ENST00000470279 ERICH3Q5RHP9 1530 aa26.18■■□□□ 1.78
STRC-208ENST00000470279 BIVM-ERCC5R4GMW8 1640 aa26.17■■□□□ 1.78
STRC-208ENST00000470279 ABCC10Q5T3U5 1492 aa26.17■■□□□ 1.78
STRC-208ENST00000470279 TOP2BQ02880 1626 aa26.14■■□□□ 1.78
STRC-208ENST00000470279 FAM69CQ0P6D2 419 aa26.13■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms