RNA–Protein interactions for RNA: ENST00000470251.1

LAMP3-203, Transcript of lysosomal associated membrane protein 3, humanhuman

TSL 2

Gene LAMP3, Length 829 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMP3-203ENST00000470251 NISCHQ9Y2I1 1504 aa47.27■■■■■ 5.16
LAMP3-203ENST00000470251 ABCC9O60706 1549 aa42.64■■■■■ 4.42
LAMP3-203ENST00000470251 CCDC180Q9P1Z9 1646 aa42.49■■■■■ 4.39
LAMP3-203ENST00000470251 RB1CC1Q8TDY2 1594 aa40.53■■■■■ 4.08
LAMP3-203ENST00000470251 NACADO15069 1562 aa40.24■■■■■ 4.03
LAMP3-203ENST00000470251 DNAJC5BQ9UF47 199 aa40.2■■■■■ 4.03
LAMP3-203ENST00000470251 DCAF8L2P0C7V8 631 aa39.81■■■■□ 3.96
LAMP3-203ENST00000470251 MYO15BQ96JP2 1530 aa39.71■■■■□ 3.95
LAMP3-203ENST00000470251 PABPN1Q86U42 306 aaKnown RBP eCLIP39.64■■■■□ 3.94
LAMP3-203ENST00000470251 UNC13AQ9UPW8 1703 aa39.52■■■■□ 3.92
LAMP3-203ENST00000470251 BICRAQ9NZM4 1560 aa39.38■■■■□ 3.9
LAMP3-203ENST00000470251 ZCCHC6Q5VYS8 1495 aaKnown RBP39.17■■■■□ 3.86
LAMP3-203ENST00000470251 DCAF1Q9Y4B6 1507 aa39.1■■■■□ 3.85
LAMP3-203ENST00000470251 SHROOM4Q9ULL8 1493 aa38.93■■■■□ 3.82
LAMP3-203ENST00000470251 SCRIBQ14160 1630 aa38.64■■■■□ 3.78
LAMP3-203ENST00000470251 CC2D2AQ9P2K1 1620 aa38.52■■■■□ 3.76
LAMP3-203ENST00000470251 CECR2Q9BXF3 1484 aa38.47■■■■□ 3.75
LAMP3-203ENST00000470251 EIF4G1Q04637 1599 aaKnown RBP38.43■■■■□ 3.74
LAMP3-203ENST00000470251 NCAPD3P42695 1498 aa37.19■■■■□ 3.54
LAMP3-203ENST00000470251 DNAJC5Q9H3Z4 198 aa37.08■■■■□ 3.53
LAMP3-203ENST00000470251 ATAD2BQ9ULI0 1458 aa37.02■■■■□ 3.52
LAMP3-203ENST00000470251 CUX2O14529 1486 aa36.91■■■■□ 3.5
LAMP3-203ENST00000470251 SMARCA4P51532 1647 aa36.89■■■■□ 3.5
LAMP3-203ENST00000470251 SMARCA2P51531 1590 aa36.89■■■■□ 3.5
LAMP3-203ENST00000470251 HMGXB3Q12766 1538 aa36.88■■■■□ 3.49
LAMP3-203ENST00000470251 ERCC6Q03468 1493 aa36.83■■■■□ 3.49
LAMP3-203ENST00000470251 BAZ1AQ9NRL2 1556 aaPredicted RBP36.7■■■■□ 3.47
LAMP3-203ENST00000470251 BAZ1BQ9UIG0 1483 aaKnown RBP36.62■■■■□ 3.45
LAMP3-203ENST00000470251 PEG3Q9GZU2 1588 aa36.61■■■■□ 3.45
LAMP3-203ENST00000470251 NESP48681 1621 aa36.58■■■■□ 3.45
LAMP3-203ENST00000470251 MROH2BQ7Z745 1585 aa36.4■■■■□ 3.42
LAMP3-203ENST00000470251 LAMC3Q9Y6N6 1575 aa36.33■■■■□ 3.41
LAMP3-203ENST00000470251 THOC2Q8NI27 1593 aaKnown RBP36.29■■■■□ 3.4
LAMP3-203ENST00000470251 PDS5BQ9NTI5 1447 aa36.14■■■■□ 3.38
LAMP3-203ENST00000470251 KIF21AQ7Z4S6 1674 aa36.05■■■■□ 3.36
LAMP3-203ENST00000470251 CADPSQ9ULU8 1353 aa36.02■■■■□ 3.36
LAMP3-203ENST00000470251 WIZO95785 1651 aa35.89■■■■□ 3.34
LAMP3-203ENST00000470251 MRC2Q9UBG0 1479 aa35.84■■■■□ 3.33
LAMP3-203ENST00000470251 WDR62O43379 1518 aa35.78■■■■□ 3.32
LAMP3-203ENST00000470251 CEP164Q9UPV0 1460 aa35.64■■■■□ 3.3
LAMP3-203ENST00000470251 RSF1Q96T23 1441 aaPredicted RBP35.6■■■■□ 3.29
LAMP3-203ENST00000470251 CFTRP13569 1480 aa35.59■■■■□ 3.29
LAMP3-203ENST00000470251 FANCD2Q9BXW9 1451 aa35.59■■■■□ 3.29
LAMP3-203ENST00000470251 TOP2AP11388 1531 aaKnown RBP35.51■■■■□ 3.27
LAMP3-203ENST00000470251 URB2Q14146 1524 aaKnown RBP35.32■■■■□ 3.24
LAMP3-203ENST00000470251 TRIM41Q8WV44 630 aa35.26■■■■□ 3.24
LAMP3-203ENST00000470251 OSCARQ8IYS5 282 aa35.13■■■■□ 3.21
LAMP3-203ENST00000470251 PRDM2Q13029 1718 aa35.09■■■■□ 3.21
LAMP3-203ENST00000470251 CCDC88BA6NC98 1476 aa35.08■■■■□ 3.21
LAMP3-203ENST00000470251 IFT140Q96RY7 1462 aa34.96■■■■□ 3.19
LAMP3-203ENST00000470251 ZNF608Q9ULD9 1512 aaPredicted RBP34.9■■■■□ 3.18
LAMP3-203ENST00000470251 TOPBP1Q92547 1522 aa34.89■■■■□ 3.18
LAMP3-203ENST00000470251 ABCC8Q09428 1581 aa34.82■■■■□ 3.16
LAMP3-203ENST00000470251 DNMBPQ6XZF7 1577 aa34.74■■■■□ 3.15
LAMP3-203ENST00000470251 EIF4G3O43432 1585 aaKnown RBP34.69■■■■□ 3.14
LAMP3-203ENST00000470251 RIMBP3CA6NJZ7 1639 aa34.68■■■■□ 3.14
LAMP3-203ENST00000470251 RIMBP3BA6NNM3 1639 aa34.68■■■■□ 3.14
LAMP3-203ENST00000470251 RIMBP3Q9UFD9 1639 aa34.68■■■■□ 3.14
LAMP3-203ENST00000470251 ARHGEF11O15085 1522 aa34.6■■■■□ 3.13
LAMP3-203ENST00000470251 TARBP1Q13395 1621 aaKnown RBP34.59■■■■□ 3.13
LAMP3-203ENST00000470251 AQRO60306 1485 aaKnown RBP eCLIP34.53■■■■□ 3.12
LAMP3-203ENST00000470251 POLA1P09884 1462 aaPredicted RBP34.53■■■■□ 3.12
LAMP3-203ENST00000470251 CHD1O14646 1710 aa34.39■■■■□ 3.1
LAMP3-203ENST00000470251 RAD54L2Q9Y4B4 1467 aa34.37■■■■□ 3.09
LAMP3-203ENST00000470251 SOGA1O94964 1423 aa34.34■■■■□ 3.09
LAMP3-203ENST00000470251 TDRD9Q8NDG6 1382 aaKnown RBP34.29■■■■□ 3.08
LAMP3-203ENST00000470251 CYB5RLQ6IPT4 315 aa34.28■■■■□ 3.08
LAMP3-203ENST00000470251 WDR97A6NE52 1622 aa34.28■■■■□ 3.08
LAMP3-203ENST00000470251 FBLN2P98095 1184 aa34.27■■■■□ 3.08
LAMP3-203ENST00000470251 FGD5Q6ZNL6 1462 aa34.27■■■■□ 3.08
LAMP3-203ENST00000470251 ARAP1Q96P48 1450 aa34.26■■■■□ 3.07
LAMP3-203ENST00000470251 CUX1P39880 1505 aa34.21■■■■□ 3.07
LAMP3-203ENST00000470251 SNAPC4Q5SXM2 1469 aa34.2■■■■□ 3.07
LAMP3-203ENST00000470251 MAGI1Q96QZ7 1491 aaPredicted RBP34.14■■■■□ 3.06
LAMP3-203ENST00000470251 CLASP1Q7Z460 1538 aa34.11■■■■□ 3.05
LAMP3-203ENST00000470251 GRIN2BQ13224 1484 aa34.09■■■■□ 3.05
LAMP3-203ENST00000470251 SUPT5HO00267 1087 aaKnown RBP34.07■■■■□ 3.04
LAMP3-203ENST00000470251 CHMP7Q8WUX9 453 aaPredicted RBP34.04■■■■□ 3.04
LAMP3-203ENST00000470251 SYNJ1O43426 1573 aa34.03■■■■□ 3.04
LAMP3-203ENST00000470251 SYNJ2O15056 1496 aa34.01■■■■□ 3.04
LAMP3-203ENST00000470251 GAPVD1Q14C86 1478 aa33.93■■■■□ 3.02
LAMP3-203ENST00000470251 TRHP20396 242 aaPredicted RBP33.92■■■■□ 3.02
LAMP3-203ENST00000470251 ABCA10Q8WWZ4 1543 aa33.91■■■■□ 3.02
LAMP3-203ENST00000470251 PBRM1Q86U86 1689 aa33.86■■■■□ 3.01
LAMP3-203ENST00000470251 ABCA5Q8WWZ7 1642 aa33.86■■■■□ 3.01
LAMP3-203ENST00000470251 WRNQ14191 1432 aaPredicted RBP eCLIP33.7■■■□□ 2.99
LAMP3-203ENST00000470251 GRIN2AQ12879 1464 aa33.66■■■□□ 2.98
LAMP3-203ENST00000470251 ADAMTS12P58397 1594 aa33.61■■■□□ 2.97
LAMP3-203ENST00000470251 TOP2BQ02880 1626 aa33.61■■■□□ 2.97
LAMP3-203ENST00000470251 NUP160Q12769 1436 aa33.6■■■□□ 2.97
LAMP3-203ENST00000470251 BIVM-ERCC5R4GMW8 1640 aa33.6■■■□□ 2.97
LAMP3-203ENST00000470251 CEP170Q5SW79 1584 aa33.53■■■□□ 2.96
LAMP3-203ENST00000470251 FHAD1B1AJZ9 1412 aa33.52■■■□□ 2.96
LAMP3-203ENST00000470251 ERCC6L2Q5T890 1561 aa33.51■■■□□ 2.96
LAMP3-203ENST00000470251 ERICH3Q5RHP9 1530 aa33.48■■■□□ 2.95
LAMP3-203ENST00000470251 SHROOM2Q13796 1616 aa33.43■■■□□ 2.94
LAMP3-203ENST00000470251 PRG4Q92954 1404 aaPredicted RBP33.21■■■□□ 2.91
LAMP3-203ENST00000470251 JPH4Q96JJ6 628 aa33.17■■■□□ 2.9
LAMP3-203ENST00000470251 RUSC2Q8N2Y8 1516 aa33.15■■■□□ 2.9
LAMP3-203ENST00000470251 AEBP2Q6ZN18 517 aaPredicted RBP33.07■■■□□ 2.88
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms