RNA–Protein interactions for RNA: ENST00000470226.1

SLC6A20-205, Transcript of solute carrier family 6 member 20, humanhuman

TSL 3

Gene SLC6A20, Length 380 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A20-205ENST00000470226 NISCHQ9Y2I1 1504 aa25.17■■□□□ 1.62
SLC6A20-205ENST00000470226 ABCC9O60706 1549 aa23.17■■□□□ 1.3
SLC6A20-205ENST00000470226 CCDC180Q9P1Z9 1646 aa22.63■■□□□ 1.21
SLC6A20-205ENST00000470226 DNAJC5BQ9UF47 199 aa22.11■■□□□ 1.13
SLC6A20-205ENST00000470226 RB1CC1Q8TDY2 1594 aa21.82■■□□□ 1.08
SLC6A20-205ENST00000470226 DCAF8L2P0C7V8 631 aa21.7■■□□□ 1.06
SLC6A20-205ENST00000470226 PABPN1Q86U42 306 aaKnown RBP eCLIP21.61■■□□□ 1.05
SLC6A20-205ENST00000470226 NACADO15069 1562 aa21.57■■□□□ 1.04
SLC6A20-205ENST00000470226 UNC13AQ9UPW8 1703 aa21.21■□□□□ 0.99
SLC6A20-205ENST00000470226 BICRAQ9NZM4 1560 aa21.14■□□□□ 0.97
SLC6A20-205ENST00000470226 MYO15BQ96JP2 1530 aa21.1■□□□□ 0.97
SLC6A20-205ENST00000470226 CECR2Q9BXF3 1484 aa20.9■□□□□ 0.94
SLC6A20-205ENST00000470226 CC2D2AQ9P2K1 1620 aa20.83■□□□□ 0.93
SLC6A20-205ENST00000470226 SHROOM4Q9ULL8 1493 aa20.8■□□□□ 0.92
SLC6A20-205ENST00000470226 ZCCHC6Q5VYS8 1495 aaKnown RBP20.73■□□□□ 0.91
SLC6A20-205ENST00000470226 DCAF1Q9Y4B6 1507 aa20.7■□□□□ 0.9
SLC6A20-205ENST00000470226 SCRIBQ14160 1630 aa20.7■□□□□ 0.9
SLC6A20-205ENST00000470226 EIF4G1Q04637 1599 aaKnown RBP20.68■□□□□ 0.9
SLC6A20-205ENST00000470226 DNAJC5Q9H3Z4 198 aa20.58■□□□□ 0.89
SLC6A20-205ENST00000470226 ERCC6Q03468 1493 aa20.05■□□□□ 0.8
SLC6A20-205ENST00000470226 CUX2O14529 1486 aa20.05■□□□□ 0.8
SLC6A20-205ENST00000470226 NCAPD3P42695 1498 aa19.95■□□□□ 0.78
SLC6A20-205ENST00000470226 ATAD2BQ9ULI0 1458 aa19.84■□□□□ 0.77
SLC6A20-205ENST00000470226 NESP48681 1621 aa19.76■□□□□ 0.75
SLC6A20-205ENST00000470226 SMARCA2P51531 1590 aa19.74■□□□□ 0.75
SLC6A20-205ENST00000470226 HMGXB3Q12766 1538 aa19.7■□□□□ 0.74
SLC6A20-205ENST00000470226 SMARCA4P51532 1647 aa19.67■□□□□ 0.74
SLC6A20-205ENST00000470226 BAZ1BQ9UIG0 1483 aaKnown RBP19.65■□□□□ 0.74
SLC6A20-205ENST00000470226 TRIM41Q8WV44 630 aa19.61■□□□□ 0.73
SLC6A20-205ENST00000470226 BAZ1AQ9NRL2 1556 aaPredicted RBP19.55■□□□□ 0.72
SLC6A20-205ENST00000470226 THOC2Q8NI27 1593 aaKnown RBP19.53■□□□□ 0.72
SLC6A20-205ENST00000470226 PDS5BQ9NTI5 1447 aa19.51■□□□□ 0.71
SLC6A20-205ENST00000470226 LAMC3Q9Y6N6 1575 aa19.51■□□□□ 0.71
SLC6A20-205ENST00000470226 PEG3Q9GZU2 1588 aa19.44■□□□□ 0.7
SLC6A20-205ENST00000470226 KIF21AQ7Z4S6 1674 aa19.41■□□□□ 0.7
SLC6A20-205ENST00000470226 MROH2BQ7Z745 1585 aa19.4■□□□□ 0.7
SLC6A20-205ENST00000470226 CADPSQ9ULU8 1353 aa19.38■□□□□ 0.69
SLC6A20-205ENST00000470226 MRC2Q9UBG0 1479 aa19.31■□□□□ 0.68
SLC6A20-205ENST00000470226 OSCARQ8IYS5 282 aa19.24■□□□□ 0.67
SLC6A20-205ENST00000470226 WDR62O43379 1518 aa19.21■□□□□ 0.67
SLC6A20-205ENST00000470226 CEP164Q9UPV0 1460 aa19.17■□□□□ 0.66
SLC6A20-205ENST00000470226 FANCD2Q9BXW9 1451 aa19.13■□□□□ 0.65
SLC6A20-205ENST00000470226 WIZO95785 1651 aa19.12■□□□□ 0.65
SLC6A20-205ENST00000470226 CFTRP13569 1480 aa19.03■□□□□ 0.64
SLC6A20-205ENST00000470226 URB2Q14146 1524 aaKnown RBP18.96■□□□□ 0.63
SLC6A20-205ENST00000470226 RSF1Q96T23 1441 aaPredicted RBP18.9■□□□□ 0.62
SLC6A20-205ENST00000470226 RIMBP3CA6NJZ7 1639 aa18.85■□□□□ 0.61
SLC6A20-205ENST00000470226 RIMBP3BA6NNM3 1639 aa18.85■□□□□ 0.61
SLC6A20-205ENST00000470226 RIMBP3Q9UFD9 1639 aa18.85■□□□□ 0.61
SLC6A20-205ENST00000470226 TOP2AP11388 1531 aaKnown RBP18.84■□□□□ 0.61
SLC6A20-205ENST00000470226 CYB5RLQ6IPT4 315 aa18.84■□□□□ 0.61
SLC6A20-205ENST00000470226 ZNF608Q9ULD9 1512 aaPredicted RBP18.81■□□□□ 0.6
SLC6A20-205ENST00000470226 IFT140Q96RY7 1462 aa18.81■□□□□ 0.6
SLC6A20-205ENST00000470226 TRHP20396 242 aaPredicted RBP18.79■□□□□ 0.6
SLC6A20-205ENST00000470226 ARHGEF11O15085 1522 aa18.78■□□□□ 0.6
SLC6A20-205ENST00000470226 FBLN2P98095 1184 aa18.74■□□□□ 0.59
SLC6A20-205ENST00000470226 CCDC88BA6NC98 1476 aa18.71■□□□□ 0.59
SLC6A20-205ENST00000470226 TOPBP1Q92547 1522 aa18.7■□□□□ 0.58
SLC6A20-205ENST00000470226 ABCC8Q09428 1581 aa18.67■□□□□ 0.58
SLC6A20-205ENST00000470226 PRDM2Q13029 1718 aa18.66■□□□□ 0.58
SLC6A20-205ENST00000470226 AQRO60306 1485 aaKnown RBP eCLIP18.65■□□□□ 0.58
SLC6A20-205ENST00000470226 EIF4G3O43432 1585 aaKnown RBP18.61■□□□□ 0.57
SLC6A20-205ENST00000470226 DNMBPQ6XZF7 1577 aa18.57■□□□□ 0.56
SLC6A20-205ENST00000470226 ARAP1Q96P48 1450 aa18.56■□□□□ 0.56
SLC6A20-205ENST00000470226 CHD1O14646 1710 aa18.54■□□□□ 0.56
SLC6A20-205ENST00000470226 AEBP2Q6ZN18 517 aaPredicted RBP18.53■□□□□ 0.56
SLC6A20-205ENST00000470226 TDRD9Q8NDG6 1382 aaKnown RBP18.51■□□□□ 0.55
SLC6A20-205ENST00000470226 TARBP1Q13395 1621 aaKnown RBP18.5■□□□□ 0.55
SLC6A20-205ENST00000470226 CHMP7Q8WUX9 453 aaPredicted RBP18.5■□□□□ 0.55
SLC6A20-205ENST00000470226 POLA1P09884 1462 aaPredicted RBP18.49■□□□□ 0.55
SLC6A20-205ENST00000470226 RAD54L2Q9Y4B4 1467 aa18.48■□□□□ 0.55
SLC6A20-205ENST00000470226 SOGA1O94964 1423 aa18.48■□□□□ 0.55
SLC6A20-205ENST00000470226 SNAPC4Q5SXM2 1469 aa18.39■□□□□ 0.54
SLC6A20-205ENST00000470226 FGD5Q6ZNL6 1462 aa18.33■□□□□ 0.53
SLC6A20-205ENST00000470226 SYNJ1O43426 1573 aa18.33■□□□□ 0.52
SLC6A20-205ENST00000470226 CLASP1Q7Z460 1538 aa18.32■□□□□ 0.52
SLC6A20-205ENST00000470226 MAGI1Q96QZ7 1491 aaPredicted RBP18.32■□□□□ 0.52
SLC6A20-205ENST00000470226 GRIN2BQ13224 1484 aa18.31■□□□□ 0.52
SLC6A20-205ENST00000470226 SYNJ2O15056 1496 aa18.27■□□□□ 0.52
SLC6A20-205ENST00000470226 WDR97A6NE52 1622 aa18.26■□□□□ 0.51
SLC6A20-205ENST00000470226 GAPVD1Q14C86 1478 aa18.25■□□□□ 0.51
SLC6A20-205ENST00000470226 CUX1P39880 1505 aa18.23■□□□□ 0.51
SLC6A20-205ENST00000470226 PBRM1Q86U86 1689 aa18.1■□□□□ 0.49
SLC6A20-205ENST00000470226 ABCA10Q8WWZ4 1543 aa18.08■□□□□ 0.49
SLC6A20-205ENST00000470226 ERCC6L2Q5T890 1561 aa18.05■□□□□ 0.48
SLC6A20-205ENST00000470226 GRIN2AQ12879 1464 aa18.05■□□□□ 0.48
SLC6A20-205ENST00000470226 ABCA5Q8WWZ7 1642 aa18.02■□□□□ 0.48
SLC6A20-205ENST00000470226 WRNQ14191 1432 aaPredicted RBP eCLIP18.01■□□□□ 0.47
SLC6A20-205ENST00000470226 CEP170Q5SW79 1584 aa18■□□□□ 0.47
SLC6A20-205ENST00000470226 SUPT5HO00267 1087 aaKnown RBP17.99■□□□□ 0.47
SLC6A20-205ENST00000470226 NUP160Q12769 1436 aa17.98■□□□□ 0.47
SLC6A20-205ENST00000470226 FHAD1B1AJZ9 1412 aa17.97■□□□□ 0.47
SLC6A20-205ENST00000470226 NPM1P06748 294 aaKnown RBP eCLIP17.96■□□□□ 0.47
SLC6A20-205ENST00000470226 JPH4Q96JJ6 628 aa17.95■□□□□ 0.46
SLC6A20-205ENST00000470226 FAM69CQ0P6D2 419 aa17.94■□□□□ 0.46
SLC6A20-205ENST00000470226 PRG4Q92954 1404 aaPredicted RBP17.93■□□□□ 0.46
SLC6A20-205ENST00000470226 ADAMTS12P58397 1594 aa17.92■□□□□ 0.46
SLC6A20-205ENST00000470226 SHROOM2Q13796 1616 aa17.87■□□□□ 0.45
SLC6A20-205ENST00000470226 KIF13AQ9H1H9 1805 aa17.84■□□□□ 0.45
SLC6A20-205ENST00000470226 ERICH3Q5RHP9 1530 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms