RNA–Protein interactions for RNA: ENST00000470184.1

LRCH4-203, Transcript of leucine rich repeats and calponin homology domain containing 4, humanhuman

TSL 2

Gene LRCH4, Length 659 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH4-203ENST00000470184 NISCHQ9Y2I1 1504 aa36.75■■■■□ 3.47
LRCH4-203ENST00000470184 CCDC180Q9P1Z9 1646 aa32.98■■■□□ 2.87
LRCH4-203ENST00000470184 ABCC9O60706 1549 aa32.69■■■□□ 2.82
LRCH4-203ENST00000470184 RB1CC1Q8TDY2 1594 aa31.31■■■□□ 2.6
LRCH4-203ENST00000470184 NACADO15069 1562 aa31.13■■■□□ 2.57
LRCH4-203ENST00000470184 DCAF8L2P0C7V8 631 aa30.97■■■□□ 2.55
LRCH4-203ENST00000470184 MYO15BQ96JP2 1530 aa30.76■■■□□ 2.51
LRCH4-203ENST00000470184 ZCCHC6Q5VYS8 1495 aaKnown RBP30.5■■■□□ 2.47
LRCH4-203ENST00000470184 UNC13AQ9UPW8 1703 aa30.49■■■□□ 2.47
LRCH4-203ENST00000470184 PABPN1Q86U42 306 aaKnown RBP eCLIP30.43■■■□□ 2.46
LRCH4-203ENST00000470184 DCAF1Q9Y4B6 1507 aa30.42■■■□□ 2.46
LRCH4-203ENST00000470184 DNAJC5BQ9UF47 199 aa30.35■■■□□ 2.45
LRCH4-203ENST00000470184 BICRAQ9NZM4 1560 aa30.24■■■□□ 2.43
LRCH4-203ENST00000470184 SHROOM4Q9ULL8 1493 aa30.05■■■□□ 2.4
LRCH4-203ENST00000470184 SCRIBQ14160 1630 aa29.99■■■□□ 2.39
LRCH4-203ENST00000470184 CC2D2AQ9P2K1 1620 aa29.56■■■□□ 2.32
LRCH4-203ENST00000470184 EIF4G1Q04637 1599 aaKnown RBP29.55■■■□□ 2.32
LRCH4-203ENST00000470184 CECR2Q9BXF3 1484 aa29.48■■■□□ 2.31
LRCH4-203ENST00000470184 NCAPD3P42695 1498 aa28.67■■■□□ 2.18
LRCH4-203ENST00000470184 SMARCA4P51532 1647 aa28.64■■■□□ 2.18
LRCH4-203ENST00000470184 SMARCA2P51531 1590 aa28.62■■■□□ 2.17
LRCH4-203ENST00000470184 ATAD2BQ9ULI0 1458 aa28.6■■■□□ 2.17
LRCH4-203ENST00000470184 BAZ1AQ9NRL2 1556 aaPredicted RBP28.58■■■□□ 2.17
LRCH4-203ENST00000470184 HMGXB3Q12766 1538 aa28.53■■■□□ 2.16
LRCH4-203ENST00000470184 BAZ1BQ9UIG0 1483 aaKnown RBP28.4■■■□□ 2.14
LRCH4-203ENST00000470184 PEG3Q9GZU2 1588 aa28.36■■■□□ 2.13
LRCH4-203ENST00000470184 ERCC6Q03468 1493 aa28.33■■■□□ 2.13
LRCH4-203ENST00000470184 MROH2BQ7Z745 1585 aa28.26■■■□□ 2.11
LRCH4-203ENST00000470184 CUX2O14529 1486 aa28.21■■■□□ 2.11
LRCH4-203ENST00000470184 NESP48681 1621 aa28.08■■■□□ 2.09
LRCH4-203ENST00000470184 LAMC3Q9Y6N6 1575 aa28.06■■■□□ 2.08
LRCH4-203ENST00000470184 WIZO95785 1651 aa27.95■■■□□ 2.07
LRCH4-203ENST00000470184 PDS5BQ9NTI5 1447 aa27.92■■■□□ 2.06
LRCH4-203ENST00000470184 DNAJC5Q9H3Z4 198 aa27.88■■■□□ 2.05
LRCH4-203ENST00000470184 CADPSQ9ULU8 1353 aa27.83■■■□□ 2.05
LRCH4-203ENST00000470184 THOC2Q8NI27 1593 aaKnown RBP27.82■■■□□ 2.04
LRCH4-203ENST00000470184 KIF21AQ7Z4S6 1674 aa27.79■■■□□ 2.04
LRCH4-203ENST00000470184 RSF1Q96T23 1441 aaPredicted RBP27.75■■■□□ 2.03
LRCH4-203ENST00000470184 TOP2AP11388 1531 aaKnown RBP27.68■■■□□ 2.02
LRCH4-203ENST00000470184 MRC2Q9UBG0 1479 aa27.62■■■□□ 2.01
LRCH4-203ENST00000470184 CEP164Q9UPV0 1460 aa27.57■■■□□ 2
LRCH4-203ENST00000470184 CFTRP13569 1480 aa27.53■■■□□ 2
LRCH4-203ENST00000470184 WDR62O43379 1518 aa27.51■■■□□ 2
LRCH4-203ENST00000470184 FANCD2Q9BXW9 1451 aa27.51■■■□□ 2
LRCH4-203ENST00000470184 PRDM2Q13029 1718 aa27.36■■□□□ 1.97
LRCH4-203ENST00000470184 CCDC88BA6NC98 1476 aa27.31■■□□□ 1.96
LRCH4-203ENST00000470184 URB2Q14146 1524 aaKnown RBP27.21■■□□□ 1.95
LRCH4-203ENST00000470184 ABCC8Q09428 1581 aa27.07■■□□□ 1.92
LRCH4-203ENST00000470184 IFT140Q96RY7 1462 aa27.01■■□□□ 1.91
LRCH4-203ENST00000470184 TOPBP1Q92547 1522 aa27■■□□□ 1.91
LRCH4-203ENST00000470184 DNMBPQ6XZF7 1577 aa26.96■■□□□ 1.91
LRCH4-203ENST00000470184 OSCARQ8IYS5 282 aa26.93■■□□□ 1.9
LRCH4-203ENST00000470184 ZNF608Q9ULD9 1512 aaPredicted RBP26.83■■□□□ 1.89
LRCH4-203ENST00000470184 EIF4G3O43432 1585 aaKnown RBP26.76■■□□□ 1.87
LRCH4-203ENST00000470184 TRIM41Q8WV44 630 aa26.76■■□□□ 1.87
LRCH4-203ENST00000470184 POLA1P09884 1462 aaPredicted RBP26.73■■□□□ 1.87
LRCH4-203ENST00000470184 TARBP1Q13395 1621 aaKnown RBP26.72■■□□□ 1.87
LRCH4-203ENST00000470184 SUPT5HO00267 1087 aaKnown RBP26.71■■□□□ 1.87
LRCH4-203ENST00000470184 SOGA1O94964 1423 aa26.64■■□□□ 1.85
LRCH4-203ENST00000470184 AQRO60306 1485 aaKnown RBP eCLIP26.63■■□□□ 1.856e-7■■■■■ 45.3
LRCH4-203ENST00000470184 WDR97A6NE52 1622 aa26.6■■□□□ 1.85
LRCH4-203ENST00000470184 FGD5Q6ZNL6 1462 aa26.59■■□□□ 1.85
LRCH4-203ENST00000470184 RAD54L2Q9Y4B4 1467 aa26.58■■□□□ 1.85
LRCH4-203ENST00000470184 CUX1P39880 1505 aa26.56■■□□□ 1.84
LRCH4-203ENST00000470184 CHD1O14646 1710 aa26.53■■□□□ 1.84
LRCH4-203ENST00000470184 TDRD9Q8NDG6 1382 aaKnown RBP26.51■■□□□ 1.83
LRCH4-203ENST00000470184 FBLN2P98095 1184 aa26.51■■□□□ 1.83
LRCH4-203ENST00000470184 RIMBP3CA6NJZ7 1639 aa26.5■■□□□ 1.83
LRCH4-203ENST00000470184 RIMBP3BA6NNM3 1639 aa26.5■■□□□ 1.83
LRCH4-203ENST00000470184 RIMBP3Q9UFD9 1639 aa26.5■■□□□ 1.83
LRCH4-203ENST00000470184 ARHGEF11O15085 1522 aa26.44■■□□□ 1.82
LRCH4-203ENST00000470184 GRIN2BQ13224 1484 aa26.42■■□□□ 1.82
LRCH4-203ENST00000470184 SNAPC4Q5SXM2 1469 aa26.42■■□□□ 1.82
LRCH4-203ENST00000470184 MAGI1Q96QZ7 1491 aaPredicted RBP26.42■■□□□ 1.82
LRCH4-203ENST00000470184 CHMP7Q8WUX9 453 aaPredicted RBP26.37■■□□□ 1.81
LRCH4-203ENST00000470184 GAPVD1Q14C86 1478 aa26.33■■□□□ 1.81
LRCH4-203ENST00000470184 ABCA10Q8WWZ4 1543 aa26.33■■□□□ 1.81
LRCH4-203ENST00000470184 SYNJ1O43426 1573 aa26.32■■□□□ 1.8
LRCH4-203ENST00000470184 PBRM1Q86U86 1689 aa26.31■■□□□ 1.8
LRCH4-203ENST00000470184 WRNQ14191 1432 aaPredicted RBP eCLIP26.3■■□□□ 1.8
LRCH4-203ENST00000470184 SYNJ2O15056 1496 aa26.3■■□□□ 1.8
LRCH4-203ENST00000470184 ABCA5Q8WWZ7 1642 aa26.25■■□□□ 1.79
LRCH4-203ENST00000470184 TOP2BQ02880 1626 aa26.25■■□□□ 1.79
LRCH4-203ENST00000470184 BIVM-ERCC5R4GMW8 1640 aa26.25■■□□□ 1.79
LRCH4-203ENST00000470184 CYB5RLQ6IPT4 315 aa26.24■■□□□ 1.79
LRCH4-203ENST00000470184 CLASP1Q7Z460 1538 aa26.2■■□□□ 1.79
LRCH4-203ENST00000470184 ARAP1Q96P48 1450 aa26.17■■□□□ 1.78
LRCH4-203ENST00000470184 ADAMTS12P58397 1594 aa26.05■■□□□ 1.76
LRCH4-203ENST00000470184 GRIN2AQ12879 1464 aa26.04■■□□□ 1.76
LRCH4-203ENST00000470184 ERICH3Q5RHP9 1530 aa26.04■■□□□ 1.76
LRCH4-203ENST00000470184 FHAD1B1AJZ9 1412 aa26.02■■□□□ 1.76
LRCH4-203ENST00000470184 TRHP20396 242 aaPredicted RBP25.95■■□□□ 1.74
LRCH4-203ENST00000470184 NUP160Q12769 1436 aa25.93■■□□□ 1.74
LRCH4-203ENST00000470184 CEP170Q5SW79 1584 aa25.9■■□□□ 1.74
LRCH4-203ENST00000470184 SHROOM2Q13796 1616 aa25.8■■□□□ 1.72
LRCH4-203ENST00000470184 KIF27Q86VH2 1401 aa25.79■■□□□ 1.72
LRCH4-203ENST00000470184 ERCC6L2Q5T890 1561 aa25.73■■□□□ 1.71
LRCH4-203ENST00000470184 CUL7Q14999 1698 aa25.72■■□□□ 1.71
LRCH4-203ENST00000470184 JPH4Q96JJ6 628 aa25.69■■□□□ 1.7
LRCH4-203ENST00000470184 PRG4Q92954 1404 aaPredicted RBP25.69■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms