RNA–Protein interactions for RNA: ENST00000470143.1

NOP56-210, Transcript of NOP56 ribonucleoprotein, humanhuman

TSL 2

Gene NOP56, Length 663 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOP56-210ENST00000470143 NISCHQ9Y2I1 1504 aa33.67■■■□□ 2.98
NOP56-210ENST00000470143 CCDC180Q9P1Z9 1646 aa30.25■■■□□ 2.43
NOP56-210ENST00000470143 ABCC9O60706 1549 aa30.02■■■□□ 2.4
NOP56-210ENST00000470143 RB1CC1Q8TDY2 1594 aa28.72■■■□□ 2.19
NOP56-210ENST00000470143 NACADO15069 1562 aa28.58■■■□□ 2.17
NOP56-210ENST00000470143 MYO15BQ96JP2 1530 aa28.28■■■□□ 2.12
NOP56-210ENST00000470143 DCAF8L2P0C7V8 631 aa28.2■■■□□ 2.1
NOP56-210ENST00000470143 DNAJC5BQ9UF47 199 aa28.13■■■□□ 2.09
NOP56-210ENST00000470143 UNC13AQ9UPW8 1703 aa28.09■■■□□ 2.09
NOP56-210ENST00000470143 PABPN1Q86U42 306 aaKnown RBP eCLIP27.92■■■□□ 2.06
NOP56-210ENST00000470143 DCAF1Q9Y4B6 1507 aa27.92■■■□□ 2.06
NOP56-210ENST00000470143 ZCCHC6Q5VYS8 1495 aaKnown RBP27.91■■■□□ 2.06
NOP56-210ENST00000470143 BICRAQ9NZM4 1560 aa27.88■■■□□ 2.05
NOP56-210ENST00000470143 SHROOM4Q9ULL8 1493 aa27.62■■■□□ 2.01
NOP56-210ENST00000470143 SCRIBQ14160 1630 aa27.41■■□□□ 1.98
NOP56-210ENST00000470143 CC2D2AQ9P2K1 1620 aa27.19■■□□□ 1.94
NOP56-210ENST00000470143 EIF4G1Q04637 1599 aaKnown RBP27.17■■□□□ 1.94
NOP56-210ENST00000470143 CECR2Q9BXF3 1484 aa27.09■■□□□ 1.93
NOP56-210ENST00000470143 NCAPD3P42695 1498 aa26.37■■□□□ 1.81
NOP56-210ENST00000470143 ATAD2BQ9ULI0 1458 aa26.25■■□□□ 1.79
NOP56-210ENST00000470143 SMARCA4P51532 1647 aa26.25■■□□□ 1.79
NOP56-210ENST00000470143 SMARCA2P51531 1590 aa26.21■■□□□ 1.79
NOP56-210ENST00000470143 HMGXB3Q12766 1538 aa26.18■■□□□ 1.78
NOP56-210ENST00000470143 BAZ1AQ9NRL2 1556 aaPredicted RBP26.14■■□□□ 1.78
NOP56-210ENST00000470143 PEG3Q9GZU2 1588 aa26.07■■□□□ 1.76
NOP56-210ENST00000470143 CUX2O14529 1486 aa25.97■■□□□ 1.75
NOP56-210ENST00000470143 BAZ1BQ9UIG0 1483 aaKnown RBP25.97■■□□□ 1.75
NOP56-210ENST00000470143 ERCC6Q03468 1493 aa25.93■■□□□ 1.74
NOP56-210ENST00000470143 MROH2BQ7Z745 1585 aa25.9■■□□□ 1.74
NOP56-210ENST00000470143 DNAJC5Q9H3Z4 198 aa25.86■■□□□ 1.73
NOP56-210ENST00000470143 NESP48681 1621 aa25.81■■□□□ 1.72
NOP56-210ENST00000470143 LAMC3Q9Y6N6 1575 aa25.77■■□□□ 1.72
NOP56-210ENST00000470143 THOC2Q8NI27 1593 aaKnown RBP25.62■■□□□ 1.69
NOP56-210ENST00000470143 WIZO95785 1651 aa25.58■■□□□ 1.69
NOP56-210ENST00000470143 PDS5BQ9NTI5 1447 aa25.58■■□□□ 1.69
NOP56-210ENST00000470143 KIF21AQ7Z4S6 1674 aa25.54■■□□□ 1.68
NOP56-210ENST00000470143 CADPSQ9ULU8 1353 aa25.53■■□□□ 1.68
NOP56-210ENST00000470143 RSF1Q96T23 1441 aaPredicted RBP25.4■■□□□ 1.66
NOP56-210ENST00000470143 MRC2Q9UBG0 1479 aa25.34■■□□□ 1.65
NOP56-210ENST00000470143 WDR62O43379 1518 aa25.3■■□□□ 1.64
NOP56-210ENST00000470143 TOP2AP11388 1531 aaKnown RBP25.3■■□□□ 1.64
NOP56-210ENST00000470143 CFTRP13569 1480 aa25.28■■□□□ 1.64
NOP56-210ENST00000470143 CEP164Q9UPV0 1460 aa25.23■■□□□ 1.63
NOP56-210ENST00000470143 FANCD2Q9BXW9 1451 aa25.21■■□□□ 1.63
NOP56-210ENST00000470143 PRDM2Q13029 1718 aa25.08■■□□□ 1.61
NOP56-210ENST00000470143 URB2Q14146 1524 aaKnown RBP25■■□□□ 1.59
NOP56-210ENST00000470143 CCDC88BA6NC98 1476 aa24.99■■□□□ 1.59
NOP56-210ENST00000470143 ABCC8Q09428 1581 aa24.78■■□□□ 1.56
NOP56-210ENST00000470143 IFT140Q96RY7 1462 aa24.76■■□□□ 1.55
NOP56-210ENST00000470143 OSCARQ8IYS5 282 aa24.75■■□□□ 1.55
NOP56-210ENST00000470143 TOPBP1Q92547 1522 aa24.75■■□□□ 1.55
NOP56-210ENST00000470143 DNMBPQ6XZF7 1577 aa24.69■■□□□ 1.54
NOP56-210ENST00000470143 ZNF608Q9ULD9 1512 aaPredicted RBP24.65■■□□□ 1.54
NOP56-210ENST00000470143 TRIM41Q8WV44 630 aa24.59■■□□□ 1.53
NOP56-210ENST00000470143 TARBP1Q13395 1621 aaKnown RBP24.57■■□□□ 1.52
NOP56-210ENST00000470143 EIF4G3O43432 1585 aaKnown RBP24.54■■□□□ 1.52
NOP56-210ENST00000470143 POLA1P09884 1462 aaPredicted RBP24.5■■□□□ 1.51
NOP56-210ENST00000470143 AQRO60306 1485 aaKnown RBP eCLIP24.43■■□□□ 1.53e-13■■■■■ 48.8
NOP56-210ENST00000470143 RIMBP3CA6NJZ7 1639 aa24.41■■□□□ 1.5
NOP56-210ENST00000470143 RIMBP3BA6NNM3 1639 aa24.41■■□□□ 1.5
NOP56-210ENST00000470143 RIMBP3Q9UFD9 1639 aa24.41■■□□□ 1.5
NOP56-210ENST00000470143 WDR97A6NE52 1622 aa24.4■■□□□ 1.5
NOP56-210ENST00000470143 SOGA1O94964 1423 aa24.38■■□□□ 1.49
NOP56-210ENST00000470143 CHD1O14646 1710 aa24.36■■□□□ 1.49
NOP56-210ENST00000470143 RAD54L2Q9Y4B4 1467 aa24.35■■□□□ 1.49
NOP56-210ENST00000470143 ARHGEF11O15085 1522 aa24.34■■□□□ 1.49
NOP56-210ENST00000470143 FGD5Q6ZNL6 1462 aa24.33■■□□□ 1.49
NOP56-210ENST00000470143 CUX1P39880 1505 aa24.33■■□□□ 1.49
NOP56-210ENST00000470143 TDRD9Q8NDG6 1382 aaKnown RBP24.28■■□□□ 1.48
NOP56-210ENST00000470143 MAGI1Q96QZ7 1491 aaPredicted RBP24.2■■□□□ 1.47
NOP56-210ENST00000470143 FBLN2P98095 1184 aa24.19■■□□□ 1.46
NOP56-210ENST00000470143 GRIN2BQ13224 1484 aa24.19■■□□□ 1.46
NOP56-210ENST00000470143 SNAPC4Q5SXM2 1469 aa24.19■■□□□ 1.46
NOP56-210ENST00000470143 SUPT5HO00267 1087 aaKnown RBP24.17■■□□□ 1.46
NOP56-210ENST00000470143 CLASP1Q7Z460 1538 aa24.12■■□□□ 1.45
NOP56-210ENST00000470143 ABCA10Q8WWZ4 1543 aa24.11■■□□□ 1.45
NOP56-210ENST00000470143 SYNJ2O15056 1496 aa24.11■■□□□ 1.45
NOP56-210ENST00000470143 PBRM1Q86U86 1689 aa24.09■■□□□ 1.45
NOP56-210ENST00000470143 SYNJ1O43426 1573 aa24.09■■□□□ 1.45
NOP56-210ENST00000470143 GAPVD1Q14C86 1478 aa24.09■■□□□ 1.45
NOP56-210ENST00000470143 ARAP1Q96P48 1450 aa24.09■■□□□ 1.45
NOP56-210ENST00000470143 CYB5RLQ6IPT4 315 aa24.09■■□□□ 1.45
NOP56-210ENST00000470143 CHMP7Q8WUX9 453 aaPredicted RBP24.09■■□□□ 1.45
NOP56-210ENST00000470143 ABCA5Q8WWZ7 1642 aa24.07■■□□□ 1.44
NOP56-210ENST00000470143 BIVM-ERCC5R4GMW8 1640 aa24.02■■□□□ 1.44
NOP56-210ENST00000470143 TOP2BQ02880 1626 aa24.01■■□□□ 1.43
NOP56-210ENST00000470143 WRNQ14191 1432 aaPredicted RBP eCLIP24.01■■□□□ 1.43
NOP56-210ENST00000470143 GRIN2AQ12879 1464 aa23.87■■□□□ 1.41
NOP56-210ENST00000470143 ADAMTS12P58397 1594 aa23.86■■□□□ 1.41
NOP56-210ENST00000470143 ERICH3Q5RHP9 1530 aa23.84■■□□□ 1.41
NOP56-210ENST00000470143 FHAD1B1AJZ9 1412 aa23.81■■□□□ 1.4
NOP56-210ENST00000470143 NUP160Q12769 1436 aa23.81■■□□□ 1.4
NOP56-210ENST00000470143 TRHP20396 242 aaPredicted RBP23.77■■□□□ 1.4
NOP56-210ENST00000470143 CEP170Q5SW79 1584 aa23.76■■□□□ 1.39
NOP56-210ENST00000470143 SHROOM2Q13796 1616 aa23.73■■□□□ 1.39
NOP56-210ENST00000470143 ERCC6L2Q5T890 1561 aa23.66■■□□□ 1.38
NOP56-210ENST00000470143 JPH4Q96JJ6 628 aa23.53■■□□□ 1.36
NOP56-210ENST00000470143 RUSC2Q8N2Y8 1516 aa23.53■■□□□ 1.36
NOP56-210ENST00000470143 PRG4Q92954 1404 aaPredicted RBP23.52■■□□□ 1.36
NOP56-210ENST00000470143 IGF1RP08069 1367 aa23.51■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms