RNA–Protein interactions for RNA: ENST00000470115.1

GTF3C2-209, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 5

Gene GTF3C2, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-209ENST00000470115 NISCHQ9Y2I1 1504 aa40.39■■■■■ 4.06
GTF3C2-209ENST00000470115 CCDC180Q9P1Z9 1646 aa36.01■■■■□ 3.35
GTF3C2-209ENST00000470115 ABCC9O60706 1549 aa35.72■■■■□ 3.31
GTF3C2-209ENST00000470115 RB1CC1Q8TDY2 1594 aa34.12■■■■□ 3.05
GTF3C2-209ENST00000470115 DCAF8L2P0C7V8 631 aa34.03■■■■□ 3.04
GTF3C2-209ENST00000470115 NACADO15069 1562 aa33.98■■■■□ 3.03
GTF3C2-209ENST00000470115 MYO15BQ96JP2 1530 aa33.63■■■□□ 2.97
GTF3C2-209ENST00000470115 ZCCHC6Q5VYS8 1495 aaKnown RBP33.53■■■□□ 2.96
GTF3C2-209ENST00000470115 PABPN1Q86U42 306 aaKnown RBP eCLIP33.37■■■□□ 2.93
GTF3C2-209ENST00000470115 DCAF1Q9Y4B6 1507 aa33.34■■■□□ 2.93
GTF3C2-209ENST00000470115 UNC13AQ9UPW8 1703 aa33.33■■■□□ 2.93
GTF3C2-209ENST00000470115 DNAJC5BQ9UF47 199 aa33.22■■■□□ 2.91
GTF3C2-209ENST00000470115 BICRAQ9NZM4 1560 aa33.13■■■□□ 2.89
GTF3C2-209ENST00000470115 SCRIBQ14160 1630 aa32.89■■■□□ 2.86
GTF3C2-209ENST00000470115 SHROOM4Q9ULL8 1493 aa32.67■■■□□ 2.82
GTF3C2-209ENST00000470115 EIF4G1Q04637 1599 aaKnown RBP32.27■■■□□ 2.76
GTF3C2-209ENST00000470115 CC2D2AQ9P2K1 1620 aa32.25■■■□□ 2.75
GTF3C2-209ENST00000470115 CECR2Q9BXF3 1484 aa32.12■■■□□ 2.73
GTF3C2-209ENST00000470115 SMARCA4P51532 1647 aa31.4■■■□□ 2.62
GTF3C2-209ENST00000470115 NCAPD3P42695 1498 aa31.4■■■□□ 2.62
GTF3C2-209ENST00000470115 ATAD2BQ9ULI0 1458 aa31.35■■■□□ 2.61
GTF3C2-209ENST00000470115 BAZ1AQ9NRL2 1556 aaPredicted RBP31.3■■■□□ 2.6
GTF3C2-209ENST00000470115 SMARCA2P51531 1590 aa31.26■■■□□ 2.6
GTF3C2-209ENST00000470115 HMGXB3Q12766 1538 aa31.16■■■□□ 2.58
GTF3C2-209ENST00000470115 MROH2BQ7Z745 1585 aa31.14■■■□□ 2.58
GTF3C2-209ENST00000470115 BAZ1BQ9UIG0 1483 aaKnown RBP31.08■■■□□ 2.57
GTF3C2-209ENST00000470115 PEG3Q9GZU2 1588 aa31.07■■■□□ 2.56
GTF3C2-209ENST00000470115 NESP48681 1621 aa30.8■■■□□ 2.52
GTF3C2-209ENST00000470115 ERCC6Q03468 1493 aa30.8■■■□□ 2.52
GTF3C2-209ENST00000470115 WIZO95785 1651 aa30.78■■■□□ 2.52
GTF3C2-209ENST00000470115 RSF1Q96T23 1441 aaPredicted RBP30.65■■■□□ 2.5
GTF3C2-209ENST00000470115 LAMC3Q9Y6N6 1575 aa30.59■■■□□ 2.49
GTF3C2-209ENST00000470115 CUX2O14529 1486 aa30.57■■■□□ 2.48
GTF3C2-209ENST00000470115 CADPSQ9ULU8 1353 aa30.48■■■□□ 2.47
GTF3C2-209ENST00000470115 PDS5BQ9NTI5 1447 aa30.44■■■□□ 2.46
GTF3C2-209ENST00000470115 TOP2AP11388 1531 aaKnown RBP30.39■■■□□ 2.46
GTF3C2-209ENST00000470115 KIF21AQ7Z4S6 1674 aa30.37■■■□□ 2.45
GTF3C2-209ENST00000470115 THOC2Q8NI27 1593 aaKnown RBP30.34■■■□□ 2.45
GTF3C2-209ENST00000470115 CFTRP13569 1480 aa30.19■■■□□ 2.42
GTF3C2-209ENST00000470115 DNAJC5Q9H3Z4 198 aa30.18■■■□□ 2.42
GTF3C2-209ENST00000470115 MRC2Q9UBG0 1479 aa30.14■■■□□ 2.42
GTF3C2-209ENST00000470115 FANCD2Q9BXW9 1451 aa30.12■■■□□ 2.41
GTF3C2-209ENST00000470115 CEP164Q9UPV0 1460 aa30.1■■■□□ 2.41
GTF3C2-209ENST00000470115 CCDC88BA6NC98 1476 aa30.09■■■□□ 2.41
GTF3C2-209ENST00000470115 WDR62O43379 1518 aa30.02■■■□□ 2.4
GTF3C2-209ENST00000470115 URB2Q14146 1524 aaKnown RBP29.86■■■□□ 2.37
GTF3C2-209ENST00000470115 PRDM2Q13029 1718 aa29.85■■■□□ 2.37
GTF3C2-209ENST00000470115 SUPT5HO00267 1087 aaKnown RBP29.67■■■□□ 2.34
GTF3C2-209ENST00000470115 TOPBP1Q92547 1522 aa29.59■■■□□ 2.33
GTF3C2-209ENST00000470115 ABCC8Q09428 1581 aa29.53■■■□□ 2.32
GTF3C2-209ENST00000470115 DNMBPQ6XZF7 1577 aa29.49■■■□□ 2.31
GTF3C2-209ENST00000470115 IFT140Q96RY7 1462 aa29.48■■■□□ 2.31
GTF3C2-209ENST00000470115 ZNF608Q9ULD9 1512 aaPredicted RBP29.43■■■□□ 2.3
GTF3C2-209ENST00000470115 OSCARQ8IYS5 282 aa29.32■■■□□ 2.28
GTF3C2-209ENST00000470115 POLA1P09884 1462 aaPredicted RBP29.31■■■□□ 2.28
GTF3C2-209ENST00000470115 TARBP1Q13395 1621 aaKnown RBP29.28■■■□□ 2.28
GTF3C2-209ENST00000470115 AQRO60306 1485 aaKnown RBP eCLIP29.23■■■□□ 2.273e-7■■■■■ 26.8
GTF3C2-209ENST00000470115 RAD54L2Q9Y4B4 1467 aa29.23■■■□□ 2.27
GTF3C2-209ENST00000470115 EIF4G3O43432 1585 aaKnown RBP29.23■■■□□ 2.27
GTF3C2-209ENST00000470115 CUX1P39880 1505 aa29.23■■■□□ 2.27
GTF3C2-209ENST00000470115 SOGA1O94964 1423 aa29.22■■■□□ 2.27
GTF3C2-209ENST00000470115 FGD5Q6ZNL6 1462 aa29.19■■■□□ 2.26
GTF3C2-209ENST00000470115 TDRD9Q8NDG6 1382 aaKnown RBP29.13■■■□□ 2.25
GTF3C2-209ENST00000470115 TRIM41Q8WV44 630 aa29.05■■■□□ 2.24
GTF3C2-209ENST00000470115 FBLN2P98095 1184 aa29■■■□□ 2.23
GTF3C2-209ENST00000470115 WDR97A6NE52 1622 aa28.96■■■□□ 2.23
GTF3C2-209ENST00000470115 CHD1O14646 1710 aa28.94■■■□□ 2.22
GTF3C2-209ENST00000470115 SNAPC4Q5SXM2 1469 aa28.91■■■□□ 2.22
GTF3C2-209ENST00000470115 WRNQ14191 1432 aaPredicted RBP eCLIP28.9■■■□□ 2.22
GTF3C2-209ENST00000470115 GRIN2BQ13224 1484 aa28.89■■■□□ 2.22
GTF3C2-209ENST00000470115 ABCA10Q8WWZ4 1543 aa28.87■■■□□ 2.21
GTF3C2-209ENST00000470115 GAPVD1Q14C86 1478 aa28.85■■■□□ 2.21
GTF3C2-209ENST00000470115 TOP2BQ02880 1626 aa28.84■■■□□ 2.21
GTF3C2-209ENST00000470115 MAGI1Q96QZ7 1491 aaPredicted RBP28.84■■■□□ 2.21
GTF3C2-209ENST00000470115 SYNJ1O43426 1573 aa28.84■■■□□ 2.21
GTF3C2-209ENST00000470115 RIMBP3CA6NJZ7 1639 aa28.83■■■□□ 2.21
GTF3C2-209ENST00000470115 RIMBP3BA6NNM3 1639 aa28.83■■■□□ 2.21
GTF3C2-209ENST00000470115 RIMBP3Q9UFD9 1639 aa28.83■■■□□ 2.21
GTF3C2-209ENST00000470115 CHMP7Q8WUX9 453 aaPredicted RBP28.83■■■□□ 2.21
GTF3C2-209ENST00000470115 BIVM-ERCC5R4GMW8 1640 aa28.83■■■□□ 2.21
GTF3C2-209ENST00000470115 ARHGEF11O15085 1522 aa28.79■■■□□ 2.2
GTF3C2-209ENST00000470115 ABCA5Q8WWZ7 1642 aa28.76■■■□□ 2.2
GTF3C2-209ENST00000470115 PBRM1Q86U86 1689 aa28.76■■■□□ 2.19
GTF3C2-209ENST00000470115 SYNJ2O15056 1496 aa28.74■■■□□ 2.19
GTF3C2-209ENST00000470115 CYB5RLQ6IPT4 315 aa28.63■■■□□ 2.17
GTF3C2-209ENST00000470115 CLASP1Q7Z460 1538 aa28.63■■■□□ 2.17
GTF3C2-209ENST00000470115 ARAP1Q96P48 1450 aa28.54■■■□□ 2.16
GTF3C2-209ENST00000470115 ADAMTS12P58397 1594 aa28.52■■■□□ 2.16
GTF3C2-209ENST00000470115 GRIN2AQ12879 1464 aa28.51■■■□□ 2.15
GTF3C2-209ENST00000470115 ERICH3Q5RHP9 1530 aa28.5■■■□□ 2.15
GTF3C2-209ENST00000470115 FHAD1B1AJZ9 1412 aa28.5■■■□□ 2.15
GTF3C2-209ENST00000470115 NUP160Q12769 1436 aa28.4■■■□□ 2.14
GTF3C2-209ENST00000470115 CEP170Q5SW79 1584 aa28.38■■■□□ 2.13
GTF3C2-209ENST00000470115 KIF27Q86VH2 1401 aa28.32■■■□□ 2.12
GTF3C2-209ENST00000470115 IGF1RP08069 1367 aa28.3■■■□□ 2.12
GTF3C2-209ENST00000470115 ERCC6L2Q5T890 1561 aa28.25■■■□□ 2.11
GTF3C2-209ENST00000470115 SHROOM2Q13796 1616 aa28.2■■■□□ 2.1
GTF3C2-209ENST00000470115 TRHP20396 242 aaPredicted RBP28.19■■■□□ 2.1
GTF3C2-209ENST00000470115 JPH4Q96JJ6 628 aa28.17■■■□□ 2.1
GTF3C2-209ENST00000470115 CUL7Q14999 1698 aa28.15■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 130.5 ms