RNA–Protein interactions for RNA: ENST00000470082.2

APBA1-202, Transcript of amyloid beta precursor protein binding family A member 1, humanhuman

TSL 2

Gene APBA1, Length 367 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APBA1-202ENST00000470082 NISCHQ9Y2I1 1504 aa30.31■■■□□ 2.44
APBA1-202ENST00000470082 CCDC180Q9P1Z9 1646 aa26.65■■□□□ 1.86
APBA1-202ENST00000470082 ABCC9O60706 1549 aa25.42■■□□□ 1.66
APBA1-202ENST00000470082 ZCCHC6Q5VYS8 1495 aaKnown RBP25.41■■□□□ 1.66
APBA1-202ENST00000470082 DCAF1Q9Y4B6 1507 aa25.08■■□□□ 1.61
APBA1-202ENST00000470082 DCAF8L2P0C7V8 631 aa24.94■■□□□ 1.58
APBA1-202ENST00000470082 MYO15BQ96JP2 1530 aa24.91■■□□□ 1.58
APBA1-202ENST00000470082 NACADO15069 1562 aa24.85■■□□□ 1.57
APBA1-202ENST00000470082 RB1CC1Q8TDY2 1594 aa24.71■■□□□ 1.55
APBA1-202ENST00000470082 SCRIBQ14160 1630 aa24.41■■□□□ 1.5
APBA1-202ENST00000470082 SHROOM4Q9ULL8 1493 aa24.38■■□□□ 1.49
APBA1-202ENST00000470082 UNC13AQ9UPW8 1703 aa24.3■■□□□ 1.48
APBA1-202ENST00000470082 BICRAQ9NZM4 1560 aa24.04■■□□□ 1.44
APBA1-202ENST00000470082 PABPN1Q86U42 306 aaKnown RBP eCLIP23.84■■□□□ 1.41
APBA1-202ENST00000470082 CECR2Q9BXF3 1484 aa23.58■■□□□ 1.37
APBA1-202ENST00000470082 BAZ1AQ9NRL2 1556 aaPredicted RBP23.42■■□□□ 1.34
APBA1-202ENST00000470082 MROH2BQ7Z745 1585 aa23.41■■□□□ 1.34
APBA1-202ENST00000470082 SMARCA4P51532 1647 aa23.41■■□□□ 1.34
APBA1-202ENST00000470082 RSF1Q96T23 1441 aaPredicted RBP23.35■■□□□ 1.33
APBA1-202ENST00000470082 EIF4G1Q04637 1599 aaKnown RBP23.3■■□□□ 1.32
APBA1-202ENST00000470082 SUPT5HO00267 1087 aaKnown RBP23.22■■□□□ 1.31
APBA1-202ENST00000470082 WIZO95785 1651 aa23.22■■□□□ 1.31
APBA1-202ENST00000470082 PEG3Q9GZU2 1588 aa23.14■■□□□ 1.3
APBA1-202ENST00000470082 ATAD2BQ9ULI0 1458 aa23.07■■□□□ 1.28
APBA1-202ENST00000470082 CC2D2AQ9P2K1 1620 aa23.04■■□□□ 1.28
APBA1-202ENST00000470082 SMARCA2P51531 1590 aa23.04■■□□□ 1.28
APBA1-202ENST00000470082 TOP2AP11388 1531 aaKnown RBP22.96■■□□□ 1.27
APBA1-202ENST00000470082 NCAPD3P42695 1498 aa22.92■■□□□ 1.26
APBA1-202ENST00000470082 HMGXB3Q12766 1538 aa22.9■■□□□ 1.26
APBA1-202ENST00000470082 BAZ1BQ9UIG0 1483 aaKnown RBP22.89■■□□□ 1.25
APBA1-202ENST00000470082 DNAJC5BQ9UF47 199 aa22.73■■□□□ 1.23
APBA1-202ENST00000470082 CCDC88BA6NC98 1476 aa22.68■■□□□ 1.22
APBA1-202ENST00000470082 CFTRP13569 1480 aa22.32■■□□□ 1.16
APBA1-202ENST00000470082 PRDM2Q13029 1718 aa22.28■■□□□ 1.16
APBA1-202ENST00000470082 CADPSQ9ULU8 1353 aa22.27■■□□□ 1.16
APBA1-202ENST00000470082 NESP48681 1621 aa22.24■■□□□ 1.15
APBA1-202ENST00000470082 LAMC3Q9Y6N6 1575 aa22.22■■□□□ 1.15
APBA1-202ENST00000470082 CHIC1Q5VXU3 224 aa22.11■■□□□ 1.13
APBA1-202ENST00000470082 ABCC8Q09428 1581 aa22.11■■□□□ 1.13
APBA1-202ENST00000470082 FANCD2Q9BXW9 1451 aa22.05■■□□□ 1.12
APBA1-202ENST00000470082 KIF21AQ7Z4S6 1674 aa22.01■■□□□ 1.11
APBA1-202ENST00000470082 PDS5BQ9NTI5 1447 aa21.98■■□□□ 1.11
APBA1-202ENST00000470082 WRNQ14191 1432 aaPredicted RBP eCLIP21.97■■□□□ 1.11
APBA1-202ENST00000470082 SYNJ1O43426 1573 aa21.96■■□□□ 1.11
APBA1-202ENST00000470082 CEP164Q9UPV0 1460 aa21.95■■□□□ 1.1
APBA1-202ENST00000470082 CUX1P39880 1505 aa21.92■■□□□ 1.1
APBA1-202ENST00000470082 BIVM-ERCC5R4GMW8 1640 aa21.91■■□□□ 1.1
APBA1-202ENST00000470082 TOP2BQ02880 1626 aa21.89■■□□□ 1.09
APBA1-202ENST00000470082 TRIM41Q8WV44 630 aa21.86■■□□□ 1.09
APBA1-202ENST00000470082 URB2Q14146 1524 aaKnown RBP21.84■■□□□ 1.09
APBA1-202ENST00000470082 DNMBPQ6XZF7 1577 aa21.83■■□□□ 1.09
APBA1-202ENST00000470082 TOPBP1Q92547 1522 aa21.8■■□□□ 1.08
APBA1-202ENST00000470082 ERCC6Q03468 1493 aa21.78■■□□□ 1.08
APBA1-202ENST00000470082 MRC2Q9UBG0 1479 aa21.78■■□□□ 1.08
APBA1-202ENST00000470082 THOC2Q8NI27 1593 aaKnown RBP21.77■■□□□ 1.08
APBA1-202ENST00000470082 WDR62O43379 1518 aa21.72■■□□□ 1.07
APBA1-202ENST00000470082 FGD5Q6ZNL6 1462 aa21.71■■□□□ 1.07
APBA1-202ENST00000470082 POLA1P09884 1462 aaPredicted RBP21.66■■□□□ 1.06
APBA1-202ENST00000470082 SOGA1O94964 1423 aa21.59■■□□□ 1.05
APBA1-202ENST00000470082 RAD54L2Q9Y4B4 1467 aa21.58■■□□□ 1.04
APBA1-202ENST00000470082 WDR97A6NE52 1622 aa21.57■■□□□ 1.04
APBA1-202ENST00000470082 RUSC2Q8N2Y8 1516 aa21.56■■□□□ 1.04
APBA1-202ENST00000470082 CUX2O14529 1486 aa21.56■■□□□ 1.04
APBA1-202ENST00000470082 TARBP1Q13395 1621 aaKnown RBP21.55■■□□□ 1.04
APBA1-202ENST00000470082 ABCA10Q8WWZ4 1543 aa21.51■■□□□ 1.03
APBA1-202ENST00000470082 EEA1Q15075 1411 aa21.46■■□□□ 1.03
APBA1-202ENST00000470082 FAM9AQ8IZU1 332 aaPredicted RBP21.45■■□□□ 1.02
APBA1-202ENST00000470082 IFT140Q96RY7 1462 aa21.44■■□□□ 1.02
APBA1-202ENST00000470082 KIF27Q86VH2 1401 aa21.42■■□□□ 1.02
APBA1-202ENST00000470082 ABCA5Q8WWZ7 1642 aa21.42■■□□□ 1.02
APBA1-202ENST00000470082 ZNF608Q9ULD9 1512 aaPredicted RBP21.36■■□□□ 1.01
APBA1-202ENST00000470082 TDRD9Q8NDG6 1382 aaKnown RBP21.35■■□□□ 1.01
APBA1-202ENST00000470082 CSRNP3Q8WYN3 585 aa21.32■■□□□ 1
APBA1-202ENST00000470082 GAPVD1Q14C86 1478 aa21.32■■□□□ 1
APBA1-202ENST00000470082 EIF4G3O43432 1585 aaKnown RBP21.31■■□□□ 1
APBA1-202ENST00000470082 PBRM1Q86U86 1689 aa21.31■■□□□ 1
APBA1-202ENST00000470082 AQRO60306 1485 aaKnown RBP eCLIP21.29■■□□□ 1
APBA1-202ENST00000470082 IGF1RP08069 1367 aa21.28■■□□□ 1
APBA1-202ENST00000470082 KIF21BO75037 1637 aa21.27■■□□□ 1
APBA1-202ENST00000470082 ERICH3Q5RHP9 1530 aa21.25■□□□□ 0.99
APBA1-202ENST00000470082 PRXQ9BXM0 1461 aa21.25■□□□□ 0.99
APBA1-202ENST00000470082 LOC105371045A0A1W2PR82 267 aa21.22■□□□□ 0.99
APBA1-202ENST00000470082 CUL7Q14999 1698 aa21.21■□□□□ 0.99
APBA1-202ENST00000470082 GRIN2BQ13224 1484 aa21.2■□□□□ 0.98
APBA1-202ENST00000470082 RAPGEF2Q9Y4G8 1499 aa21.18■□□□□ 0.98
APBA1-202ENST00000470082 ADAMTS12P58397 1594 aa21.16■□□□□ 0.98
APBA1-202ENST00000470082 GOLGA3Q08378 1498 aa21.16■□□□□ 0.98
APBA1-202ENST00000470082 CARMIL1Q5VZK9 1371 aa21.15■□□□□ 0.98
APBA1-202ENST00000470082 EHMT2Q96KQ7 1210 aa21.14■□□□□ 0.97
APBA1-202ENST00000470082 SNAPC4Q5SXM2 1469 aa21.13■□□□□ 0.97
APBA1-202ENST00000470082 MAGI1Q96QZ7 1491 aaPredicted RBP21.07■□□□□ 0.96
APBA1-202ENST00000470082 FHAD1B1AJZ9 1412 aa21.07■□□□□ 0.96
APBA1-202ENST00000470082 TNIKQ9UKE5 1360 aa21.01■□□□□ 0.95
APBA1-202ENST00000470082 SYNJ2O15056 1496 aa20.99■□□□□ 0.95
APBA1-202ENST00000470082 UBTFP17480 764 aaKnown RBP20.97■□□□□ 0.95
APBA1-202ENST00000470082 GRIN2AQ12879 1464 aa20.96■□□□□ 0.95
APBA1-202ENST00000470082 CTTNBP2Q8WZ74 1663 aa20.96■□□□□ 0.95
APBA1-202ENST00000470082 CHD1O14646 1710 aa20.94■□□□□ 0.94
APBA1-202ENST00000470082 CEP162Q5TB80 1403 aa20.88■□□□□ 0.93
APBA1-202ENST00000470082 CEP170Q5SW79 1584 aa20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms