RNA–Protein interactions for RNA: ENST00000469992.1

MUC4-213, Transcript of mucin 4, cell surface associated, humanhuman

TSL 3

Gene MUC4, Length 698 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC4-213ENST00000469992 NISCHQ9Y2I1 1504 aa37.15■■■■□ 3.54
MUC4-213ENST00000469992 CCDC180Q9P1Z9 1646 aa33.18■■■□□ 2.9
MUC4-213ENST00000469992 ABCC9O60706 1549 aa32.46■■■□□ 2.79
MUC4-213ENST00000469992 RB1CC1Q8TDY2 1594 aa31.23■■■□□ 2.59
MUC4-213ENST00000469992 NACADO15069 1562 aa31.15■■■□□ 2.58
MUC4-213ENST00000469992 DCAF8L2P0C7V8 631 aa31.01■■■□□ 2.55
MUC4-213ENST00000469992 ZCCHC6Q5VYS8 1495 aaKnown RBP30.94■■■□□ 2.54
MUC4-213ENST00000469992 MYO15BQ96JP2 1530 aa30.91■■■□□ 2.54
MUC4-213ENST00000469992 DCAF1Q9Y4B6 1507 aa30.74■■■□□ 2.51
MUC4-213ENST00000469992 UNC13AQ9UPW8 1703 aa30.62■■■□□ 2.49
MUC4-213ENST00000469992 BICRAQ9NZM4 1560 aa30.28■■■□□ 2.44
MUC4-213ENST00000469992 PABPN1Q86U42 306 aaKnown RBP eCLIP30.26■■■□□ 2.43
MUC4-213ENST00000469992 SCRIBQ14160 1630 aa30.22■■■□□ 2.43
MUC4-213ENST00000469992 SHROOM4Q9ULL8 1493 aa29.95■■■□□ 2.39
MUC4-213ENST00000469992 DNAJC5BQ9UF47 199 aa29.81■■■□□ 2.36
MUC4-213ENST00000469992 EIF4G1Q04637 1599 aaKnown RBP29.48■■■□□ 2.31
MUC4-213ENST00000469992 CC2D2AQ9P2K1 1620 aa29.4■■■□□ 2.3
MUC4-213ENST00000469992 CECR2Q9BXF3 1484 aa29.17■■■□□ 2.26
MUC4-213ENST00000469992 SMARCA4P51532 1647 aa28.9■■■□□ 2.22
MUC4-213ENST00000469992 BAZ1AQ9NRL2 1556 aaPredicted RBP28.83■■■□□ 2.21
MUC4-213ENST00000469992 SMARCA2P51531 1590 aa28.71■■■□□ 2.19
MUC4-213ENST00000469992 ATAD2BQ9ULI0 1458 aa28.71■■■□□ 2.19
MUC4-213ENST00000469992 NCAPD3P42695 1498 aa28.7■■■□□ 2.18
MUC4-213ENST00000469992 MROH2BQ7Z745 1585 aa28.63■■■□□ 2.17
MUC4-213ENST00000469992 HMGXB3Q12766 1538 aa28.6■■■□□ 2.17
MUC4-213ENST00000469992 PEG3Q9GZU2 1588 aa28.6■■■□□ 2.17
MUC4-213ENST00000469992 BAZ1BQ9UIG0 1483 aaKnown RBP28.49■■■□□ 2.15
MUC4-213ENST00000469992 WIZO95785 1651 aa28.36■■■□□ 2.13
MUC4-213ENST00000469992 RSF1Q96T23 1441 aaPredicted RBP28.23■■■□□ 2.11
MUC4-213ENST00000469992 NESP48681 1621 aa28.06■■■□□ 2.08
MUC4-213ENST00000469992 TOP2AP11388 1531 aaKnown RBP28.04■■■□□ 2.08
MUC4-213ENST00000469992 LAMC3Q9Y6N6 1575 aa28.02■■■□□ 2.08
MUC4-213ENST00000469992 ERCC6Q03468 1493 aa28■■■□□ 2.07
MUC4-213ENST00000469992 CADPSQ9ULU8 1353 aa27.84■■■□□ 2.05
MUC4-213ENST00000469992 KIF21AQ7Z4S6 1674 aa27.83■■■□□ 2.05
MUC4-213ENST00000469992 PDS5BQ9NTI5 1447 aa27.77■■■□□ 2.04
MUC4-213ENST00000469992 CUX2O14529 1486 aa27.75■■■□□ 2.03
MUC4-213ENST00000469992 THOC2Q8NI27 1593 aaKnown RBP27.73■■■□□ 2.03
MUC4-213ENST00000469992 CFTRP13569 1480 aa27.68■■■□□ 2.02
MUC4-213ENST00000469992 CCDC88BA6NC98 1476 aa27.66■■■□□ 2.02
MUC4-213ENST00000469992 PRDM2Q13029 1718 aa27.64■■■□□ 2.01
MUC4-213ENST00000469992 FANCD2Q9BXW9 1451 aa27.56■■■□□ 2
MUC4-213ENST00000469992 CEP164Q9UPV0 1460 aa27.55■■■□□ 2
MUC4-213ENST00000469992 MRC2Q9UBG0 1479 aa27.53■■■□□ 2
MUC4-213ENST00000469992 WDR62O43379 1518 aa27.46■■□□□ 1.99
MUC4-213ENST00000469992 SUPT5HO00267 1087 aaKnown RBP27.41■■□□□ 1.98
MUC4-213ENST00000469992 URB2Q14146 1524 aaKnown RBP27.3■■□□□ 1.96
MUC4-213ENST00000469992 TOPBP1Q92547 1522 aa27.11■■□□□ 1.93
MUC4-213ENST00000469992 ABCC8Q09428 1581 aa27.1■■□□□ 1.93
MUC4-213ENST00000469992 DNMBPQ6XZF7 1577 aa27.1■■□□□ 1.93
MUC4-213ENST00000469992 IFT140Q96RY7 1462 aa26.96■■□□□ 1.91
MUC4-213ENST00000469992 DNAJC5Q9H3Z4 198 aa26.94■■□□□ 1.9
MUC4-213ENST00000469992 CUX1P39880 1505 aa26.88■■□□□ 1.89
MUC4-213ENST00000469992 POLA1P09884 1462 aaPredicted RBP26.87■■□□□ 1.89
MUC4-213ENST00000469992 TARBP1Q13395 1621 aaKnown RBP26.86■■□□□ 1.89
MUC4-213ENST00000469992 ZNF608Q9ULD9 1512 aaPredicted RBP26.84■■□□□ 1.89
MUC4-213ENST00000469992 FGD5Q6ZNL6 1462 aa26.81■■□□□ 1.88
MUC4-213ENST00000469992 EIF4G3O43432 1585 aaKnown RBP26.8■■□□□ 1.88
MUC4-213ENST00000469992 RAD54L2Q9Y4B4 1467 aa26.74■■□□□ 1.87
MUC4-213ENST00000469992 SOGA1O94964 1423 aa26.73■■□□□ 1.87
MUC4-213ENST00000469992 BIVM-ERCC5R4GMW8 1640 aa26.68■■□□□ 1.86
MUC4-213ENST00000469992 WDR97A6NE52 1622 aa26.67■■□□□ 1.86
MUC4-213ENST00000469992 AQRO60306 1485 aaKnown RBP eCLIP26.66■■□□□ 1.86
MUC4-213ENST00000469992 TOP2BQ02880 1626 aa26.65■■□□□ 1.86
MUC4-213ENST00000469992 WRNQ14191 1432 aaPredicted RBP eCLIP26.64■■□□□ 1.85
MUC4-213ENST00000469992 SYNJ1O43426 1573 aa26.63■■□□□ 1.85
MUC4-213ENST00000469992 TDRD9Q8NDG6 1382 aaKnown RBP26.58■■□□□ 1.84
MUC4-213ENST00000469992 ABCA10Q8WWZ4 1543 aa26.53■■□□□ 1.84
MUC4-213ENST00000469992 CHD1O14646 1710 aa26.53■■□□□ 1.84
MUC4-213ENST00000469992 PBRM1Q86U86 1689 aa26.51■■□□□ 1.83
MUC4-213ENST00000469992 OSCARQ8IYS5 282 aa26.51■■□□□ 1.83
MUC4-213ENST00000469992 ABCA5Q8WWZ7 1642 aa26.49■■□□□ 1.83
MUC4-213ENST00000469992 GRIN2BQ13224 1484 aa26.46■■□□□ 1.83
MUC4-213ENST00000469992 SNAPC4Q5SXM2 1469 aa26.45■■□□□ 1.82
MUC4-213ENST00000469992 GAPVD1Q14C86 1478 aa26.44■■□□□ 1.82
MUC4-213ENST00000469992 MAGI1Q96QZ7 1491 aaPredicted RBP26.41■■□□□ 1.82
MUC4-213ENST00000469992 FBLN2P98095 1184 aa26.34■■□□□ 1.81
MUC4-213ENST00000469992 SYNJ2O15056 1496 aa26.3■■□□□ 1.8
MUC4-213ENST00000469992 CHMP7Q8WUX9 453 aaPredicted RBP26.25■■□□□ 1.79
MUC4-213ENST00000469992 ADAMTS12P58397 1594 aa26.24■■□□□ 1.79
MUC4-213ENST00000469992 ERICH3Q5RHP9 1530 aa26.23■■□□□ 1.79
MUC4-213ENST00000469992 RIMBP3CA6NJZ7 1639 aa26.21■■□□□ 1.79
MUC4-213ENST00000469992 RIMBP3BA6NNM3 1639 aa26.21■■□□□ 1.79
MUC4-213ENST00000469992 RIMBP3Q9UFD9 1639 aa26.21■■□□□ 1.79
MUC4-213ENST00000469992 CLASP1Q7Z460 1538 aa26.17■■□□□ 1.78
MUC4-213ENST00000469992 ARHGEF11O15085 1522 aa26.15■■□□□ 1.78
MUC4-213ENST00000469992 GRIN2AQ12879 1464 aa26.13■■□□□ 1.77
MUC4-213ENST00000469992 FHAD1B1AJZ9 1412 aa26.13■■□□□ 1.77
MUC4-213ENST00000469992 KIF27Q86VH2 1401 aa26.09■■□□□ 1.77
MUC4-213ENST00000469992 TRIM41Q8WV44 630 aa26.04■■□□□ 1.76
MUC4-213ENST00000469992 CEP170Q5SW79 1584 aa26.03■■□□□ 1.76
MUC4-213ENST00000469992 CUL7Q14999 1698 aa26.02■■□□□ 1.76
MUC4-213ENST00000469992 NUP160Q12769 1436 aa26■■□□□ 1.75
MUC4-213ENST00000469992 IGF1RP08069 1367 aa25.95■■□□□ 1.75
MUC4-213ENST00000469992 ARAP1Q96P48 1450 aa25.92■■□□□ 1.74
MUC4-213ENST00000469992 SHROOM2Q13796 1616 aa25.88■■□□□ 1.73
MUC4-213ENST00000469992 RUSC2Q8N2Y8 1516 aa25.86■■□□□ 1.73
MUC4-213ENST00000469992 CYB5RLQ6IPT4 315 aa25.84■■□□□ 1.73
MUC4-213ENST00000469992 CARMIL1Q5VZK9 1371 aa25.82■■□□□ 1.72
MUC4-213ENST00000469992 ERCC6L2Q5T890 1561 aa25.79■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms