RNA–Protein interactions for RNA: ENST00000469969.1

DEPDC5-213, Transcript of DEP domain containing 5, humanhuman

TSL 5

Gene DEPDC5, Length 677 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC5-213ENST00000469969 NISCHQ9Y2I1 1504 aa31.14■■■□□ 2.57
DEPDC5-213ENST00000469969 ABCC9O60706 1549 aa28.62■■■□□ 2.17
DEPDC5-213ENST00000469969 CCDC180Q9P1Z9 1646 aa28.07■■■□□ 2.08
DEPDC5-213ENST00000469969 DNAJC5BQ9UF47 199 aa27.28■■□□□ 1.96
DEPDC5-213ENST00000469969 RB1CC1Q8TDY2 1594 aa26.99■■□□□ 1.91
DEPDC5-213ENST00000469969 NACADO15069 1562 aa26.7■■□□□ 1.86
DEPDC5-213ENST00000469969 PABPN1Q86U42 306 aaKnown RBP eCLIP26.61■■□□□ 1.85
DEPDC5-213ENST00000469969 DCAF8L2P0C7V8 631 aa26.56■■□□□ 1.84
DEPDC5-213ENST00000469969 UNC13AQ9UPW8 1703 aa26.25■■□□□ 1.79
DEPDC5-213ENST00000469969 BICRAQ9NZM4 1560 aa26.21■■□□□ 1.79
DEPDC5-213ENST00000469969 MYO15BQ96JP2 1530 aa26.19■■□□□ 1.78
DEPDC5-213ENST00000469969 SHROOM4Q9ULL8 1493 aa25.85■■□□□ 1.73
DEPDC5-213ENST00000469969 CECR2Q9BXF3 1484 aa25.84■■□□□ 1.73
DEPDC5-213ENST00000469969 CC2D2AQ9P2K1 1620 aa25.77■■□□□ 1.72
DEPDC5-213ENST00000469969 ZCCHC6Q5VYS8 1495 aaKnown RBP25.71■■□□□ 1.71
DEPDC5-213ENST00000469969 DCAF1Q9Y4B6 1507 aa25.68■■□□□ 1.7
DEPDC5-213ENST00000469969 EIF4G1Q04637 1599 aaKnown RBP25.62■■□□□ 1.69
DEPDC5-213ENST00000469969 SCRIBQ14160 1630 aa25.6■■□□□ 1.69
DEPDC5-213ENST00000469969 DNAJC5Q9H3Z4 198 aa25.4■■□□□ 1.66
DEPDC5-213ENST00000469969 CUX2O14529 1486 aa24.85■■□□□ 1.57
DEPDC5-213ENST00000469969 ERCC6Q03468 1493 aa24.77■■□□□ 1.56
DEPDC5-213ENST00000469969 NCAPD3P42695 1498 aa24.69■■□□□ 1.54
DEPDC5-213ENST00000469969 ATAD2BQ9ULI0 1458 aa24.55■■□□□ 1.52
DEPDC5-213ENST00000469969 NESP48681 1621 aa24.44■■□□□ 1.5
DEPDC5-213ENST00000469969 SMARCA2P51531 1590 aa24.44■■□□□ 1.5
DEPDC5-213ENST00000469969 AEBP2Q6ZN18 517 aaPredicted RBP24.43■■□□□ 1.5
DEPDC5-213ENST00000469969 HMGXB3Q12766 1538 aa24.43■■□□□ 1.5
DEPDC5-213ENST00000469969 SMARCA4P51532 1647 aa24.35■■□□□ 1.49
DEPDC5-213ENST00000469969 BAZ1BQ9UIG0 1483 aaKnown RBP24.29■■□□□ 1.48
DEPDC5-213ENST00000469969 THOC2Q8NI27 1593 aaKnown RBP24.24■■□□□ 1.47
DEPDC5-213ENST00000469969 BAZ1AQ9NRL2 1556 aaPredicted RBP24.19■■□□□ 1.46
DEPDC5-213ENST00000469969 LAMC3Q9Y6N6 1575 aa24.16■■□□□ 1.46
DEPDC5-213ENST00000469969 PEG3Q9GZU2 1588 aa24.12■■□□□ 1.45
DEPDC5-213ENST00000469969 TRIM41Q8WV44 630 aa24.11■■□□□ 1.45
DEPDC5-213ENST00000469969 PDS5BQ9NTI5 1447 aa24.1■■□□□ 1.45
DEPDC5-213ENST00000469969 KIF21AQ7Z4S6 1674 aa24.02■■□□□ 1.44
DEPDC5-213ENST00000469969 MROH2BQ7Z745 1585 aa23.99■■□□□ 1.43
DEPDC5-213ENST00000469969 CADPSQ9ULU8 1353 aa23.93■■□□□ 1.42
DEPDC5-213ENST00000469969 MRC2Q9UBG0 1479 aa23.9■■□□□ 1.42
DEPDC5-213ENST00000469969 WDR62O43379 1518 aa23.84■■□□□ 1.41
DEPDC5-213ENST00000469969 CEP164Q9UPV0 1460 aa23.72■■□□□ 1.39
DEPDC5-213ENST00000469969 OSCARQ8IYS5 282 aa23.68■■□□□ 1.38
DEPDC5-213ENST00000469969 FANCD2Q9BXW9 1451 aa23.65■■□□□ 1.38
DEPDC5-213ENST00000469969 WIZO95785 1651 aa23.62■■□□□ 1.37
DEPDC5-213ENST00000469969 CFTRP13569 1480 aa23.55■■□□□ 1.36
DEPDC5-213ENST00000469969 URB2Q14146 1524 aaKnown RBP23.48■■□□□ 1.35
DEPDC5-213ENST00000469969 RSF1Q96T23 1441 aaPredicted RBP23.34■■□□□ 1.33
DEPDC5-213ENST00000469969 TOP2AP11388 1531 aaKnown RBP23.33■■□□□ 1.33
DEPDC5-213ENST00000469969 RIMBP3CA6NJZ7 1639 aa23.33■■□□□ 1.33
DEPDC5-213ENST00000469969 RIMBP3BA6NNM3 1639 aa23.33■■□□□ 1.33
DEPDC5-213ENST00000469969 RIMBP3Q9UFD9 1639 aa23.33■■□□□ 1.33
DEPDC5-213ENST00000469969 IFT140Q96RY7 1462 aa23.27■■□□□ 1.32
DEPDC5-213ENST00000469969 ZNF608Q9ULD9 1512 aaPredicted RBP23.27■■□□□ 1.32
DEPDC5-213ENST00000469969 ARHGEF11O15085 1522 aa23.25■■□□□ 1.31
DEPDC5-213ENST00000469969 CHIC1Q5VXU3 224 aa23.17■■□□□ 1.3
DEPDC5-213ENST00000469969 CYB5RLQ6IPT4 315 aa23.17■■□□□ 1.3
DEPDC5-213ENST00000469969 TOPBP1Q92547 1522 aa23.13■■□□□ 1.29
DEPDC5-213ENST00000469969 PRDM2Q13029 1718 aa23.11■■□□□ 1.29
DEPDC5-213ENST00000469969 CCDC88BA6NC98 1476 aa23.1■■□□□ 1.29
DEPDC5-213ENST00000469969 EIF4G3O43432 1585 aaKnown RBP23.07■■□□□ 1.28
DEPDC5-213ENST00000469969 TRHP20396 242 aaPredicted RBP23.07■■□□□ 1.28
DEPDC5-213ENST00000469969 ABCC8Q09428 1581 aa23.06■■□□□ 1.28
DEPDC5-213ENST00000469969 AQRO60306 1485 aaKnown RBP eCLIP23.01■■□□□ 1.27
DEPDC5-213ENST00000469969 ARAP1Q96P48 1450 aa23■■□□□ 1.27
DEPDC5-213ENST00000469969 FBLN2P98095 1184 aa23■■□□□ 1.27
DEPDC5-213ENST00000469969 DNMBPQ6XZF7 1577 aa22.99■■□□□ 1.27
DEPDC5-213ENST00000469969 CHD1O14646 1710 aa22.93■■□□□ 1.26
DEPDC5-213ENST00000469969 TARBP1Q13395 1621 aaKnown RBP22.93■■□□□ 1.26
DEPDC5-213ENST00000469969 POLA1P09884 1462 aaPredicted RBP22.88■■□□□ 1.25
DEPDC5-213ENST00000469969 RAD54L2Q9Y4B4 1467 aa22.81■■□□□ 1.24
DEPDC5-213ENST00000469969 TDRD9Q8NDG6 1382 aaKnown RBP22.81■■□□□ 1.24
DEPDC5-213ENST00000469969 SOGA1O94964 1423 aa22.79■■□□□ 1.24
DEPDC5-213ENST00000469969 SNAPC4Q5SXM2 1469 aa22.76■■□□□ 1.23
DEPDC5-213ENST00000469969 CHMP7Q8WUX9 453 aaPredicted RBP22.75■■□□□ 1.23
DEPDC5-213ENST00000469969 CLASP1Q7Z460 1538 aa22.72■■□□□ 1.23
DEPDC5-213ENST00000469969 SYNJ1O43426 1573 aa22.67■■□□□ 1.22
DEPDC5-213ENST00000469969 MAGI1Q96QZ7 1491 aaPredicted RBP22.67■■□□□ 1.22
DEPDC5-213ENST00000469969 FGD5Q6ZNL6 1462 aa22.66■■□□□ 1.22
DEPDC5-213ENST00000469969 WDR97A6NE52 1622 aa22.66■■□□□ 1.22
DEPDC5-213ENST00000469969 GRIN2BQ13224 1484 aa22.64■■□□□ 1.21
DEPDC5-213ENST00000469969 SYNJ2O15056 1496 aa22.61■■□□□ 1.21
DEPDC5-213ENST00000469969 CUX1P39880 1505 aa22.57■■□□□ 1.2
DEPDC5-213ENST00000469969 GAPVD1Q14C86 1478 aa22.56■■□□□ 1.2
DEPDC5-213ENST00000469969 PBRM1Q86U86 1689 aa22.39■■□□□ 1.18
DEPDC5-213ENST00000469969 ABCA10Q8WWZ4 1543 aa22.38■■□□□ 1.17
DEPDC5-213ENST00000469969 ABCA5Q8WWZ7 1642 aa22.35■■□□□ 1.17
DEPDC5-213ENST00000469969 ERCC6L2Q5T890 1561 aa22.34■■□□□ 1.17
DEPDC5-213ENST00000469969 GRIN2AQ12879 1464 aa22.34■■□□□ 1.17
DEPDC5-213ENST00000469969 NUP160Q12769 1436 aa22.28■■□□□ 1.16
DEPDC5-213ENST00000469969 CEP170Q5SW79 1584 aa22.27■■□□□ 1.16
DEPDC5-213ENST00000469969 WRNQ14191 1432 aaPredicted RBP eCLIP22.23■■□□□ 1.15
DEPDC5-213ENST00000469969 ADAMTS12P58397 1594 aa22.23■■□□□ 1.15
DEPDC5-213ENST00000469969 FHAD1B1AJZ9 1412 aa22.2■■□□□ 1.14
DEPDC5-213ENST00000469969 SHROOM2Q13796 1616 aa22.17■■□□□ 1.14
DEPDC5-213ENST00000469969 PRG4Q92954 1404 aaPredicted RBP22.12■■□□□ 1.13
DEPDC5-213ENST00000469969 ERICH3Q5RHP9 1530 aa22.08■■□□□ 1.13
DEPDC5-213ENST00000469969 JPH4Q96JJ6 628 aa22.08■■□□□ 1.13
DEPDC5-213ENST00000469969 KIF13AQ9H1H9 1805 aa22.08■■□□□ 1.12
DEPDC5-213ENST00000469969 FAM69CQ0P6D2 419 aa22.07■■□□□ 1.12
DEPDC5-213ENST00000469969 TOP2BQ02880 1626 aa22.05■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms