RNA–Protein interactions for RNA: ENST00000469956.1

LCK-209, Transcript of LCK proto-oncogene, Src family tyrosine kinase, humanhuman

TSL 2

Gene LCK, Length 923 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCK-209ENST00000469956 NISCHQ9Y2I1 1504 aa43.06■■■■■ 4.48
LCK-209ENST00000469956 CCDC180Q9P1Z9 1646 aa38.45■■■■□ 3.75
LCK-209ENST00000469956 ABCC9O60706 1549 aa37.99■■■■□ 3.67
LCK-209ENST00000469956 RB1CC1Q8TDY2 1594 aa36.34■■■■□ 3.41
LCK-209ENST00000469956 NACADO15069 1562 aa36.19■■■■□ 3.38
LCK-209ENST00000469956 DCAF8L2P0C7V8 631 aa36.12■■■■□ 3.37
LCK-209ENST00000469956 ZCCHC6Q5VYS8 1495 aaKnown RBP35.8■■■■□ 3.32
LCK-209ENST00000469956 MYO15BQ96JP2 1530 aa35.8■■■■□ 3.32
LCK-209ENST00000469956 UNC13AQ9UPW8 1703 aa35.66■■■■□ 3.3
LCK-209ENST00000469956 DCAF1Q9Y4B6 1507 aa35.55■■■■□ 3.28
LCK-209ENST00000469956 PABPN1Q86U42 306 aaKnown RBP eCLIP35.42■■■■□ 3.26
LCK-209ENST00000469956 BICRAQ9NZM4 1560 aa35.31■■■■□ 3.24
LCK-209ENST00000469956 DNAJC5BQ9UF47 199 aa35.18■■■■□ 3.22
LCK-209ENST00000469956 SCRIBQ14160 1630 aa35.13■■■■□ 3.21
LCK-209ENST00000469956 SHROOM4Q9ULL8 1493 aa34.77■■■■□ 3.16
LCK-209ENST00000469956 EIF4G1Q04637 1599 aaKnown RBP34.38■■■■□ 3.09
LCK-209ENST00000469956 CC2D2AQ9P2K1 1620 aa34.35■■■■□ 3.09
LCK-209ENST00000469956 CECR2Q9BXF3 1484 aa34.14■■■■□ 3.06
LCK-209ENST00000469956 SMARCA4P51532 1647 aa33.53■■■□□ 2.96
LCK-209ENST00000469956 BAZ1AQ9NRL2 1556 aaPredicted RBP33.38■■■□□ 2.93
LCK-209ENST00000469956 ATAD2BQ9ULI0 1458 aa33.38■■■□□ 2.93
LCK-209ENST00000469956 NCAPD3P42695 1498 aa33.37■■■□□ 2.93
LCK-209ENST00000469956 SMARCA2P51531 1590 aa33.3■■■□□ 2.92
LCK-209ENST00000469956 MROH2BQ7Z745 1585 aa33.22■■■□□ 2.91
LCK-209ENST00000469956 HMGXB3Q12766 1538 aa33.21■■■□□ 2.91
LCK-209ENST00000469956 PEG3Q9GZU2 1588 aa33.14■■■□□ 2.9
LCK-209ENST00000469956 BAZ1BQ9UIG0 1483 aaKnown RBP33.09■■■□□ 2.89
LCK-209ENST00000469956 WIZO95785 1651 aa32.89■■■□□ 2.86
LCK-209ENST00000469956 NESP48681 1621 aa32.8■■■□□ 2.84
LCK-209ENST00000469956 ERCC6Q03468 1493 aa32.73■■■□□ 2.83
LCK-209ENST00000469956 RSF1Q96T23 1441 aaPredicted RBP32.67■■■□□ 2.82
LCK-209ENST00000469956 LAMC3Q9Y6N6 1575 aa32.59■■■□□ 2.81
LCK-209ENST00000469956 CUX2O14529 1486 aa32.47■■■□□ 2.79
LCK-209ENST00000469956 TOP2AP11388 1531 aaKnown RBP32.46■■■□□ 2.79
LCK-209ENST00000469956 KIF21AQ7Z4S6 1674 aa32.44■■■□□ 2.78
LCK-209ENST00000469956 CADPSQ9ULU8 1353 aa32.38■■■□□ 2.77
LCK-209ENST00000469956 THOC2Q8NI27 1593 aaKnown RBP32.37■■■□□ 2.77
LCK-209ENST00000469956 PDS5BQ9NTI5 1447 aa32.33■■■□□ 2.77
LCK-209ENST00000469956 CFTRP13569 1480 aa32.14■■■□□ 2.74
LCK-209ENST00000469956 MRC2Q9UBG0 1479 aa32.08■■■□□ 2.73
LCK-209ENST00000469956 CCDC88BA6NC98 1476 aa32.07■■■□□ 2.72
LCK-209ENST00000469956 FANCD2Q9BXW9 1451 aa32.06■■■□□ 2.72
LCK-209ENST00000469956 CEP164Q9UPV0 1460 aa32.05■■■□□ 2.72
LCK-209ENST00000469956 WDR62O43379 1518 aa32■■■□□ 2.71
LCK-209ENST00000469956 PRDM2Q13029 1718 aa31.97■■■□□ 2.71
LCK-209ENST00000469956 DNAJC5Q9H3Z4 198 aa31.86■■■□□ 2.69
LCK-209ENST00000469956 URB2Q14146 1524 aaKnown RBP31.8■■■□□ 2.68
LCK-209ENST00000469956 SUPT5HO00267 1087 aaKnown RBP31.61■■■□□ 2.65
LCK-209ENST00000469956 TOPBP1Q92547 1522 aa31.52■■■□□ 2.64
LCK-209ENST00000469956 DNMBPQ6XZF7 1577 aa31.46■■■□□ 2.63
LCK-209ENST00000469956 ABCC8Q09428 1581 aa31.41■■■□□ 2.62
LCK-209ENST00000469956 IFT140Q96RY7 1462 aa31.37■■■□□ 2.61
LCK-209ENST00000469956 ZNF608Q9ULD9 1512 aaPredicted RBP31.34■■■□□ 2.61
LCK-209ENST00000469956 TARBP1Q13395 1621 aaKnown RBP31.24■■■□□ 2.59
LCK-209ENST00000469956 POLA1P09884 1462 aaPredicted RBP31.23■■■□□ 2.59
LCK-209ENST00000469956 EIF4G3O43432 1585 aaKnown RBP31.22■■■□□ 2.59
LCK-209ENST00000469956 CUX1P39880 1505 aa31.19■■■□□ 2.58
LCK-209ENST00000469956 RAD54L2Q9Y4B4 1467 aa31.14■■■□□ 2.57
LCK-209ENST00000469956 FGD5Q6ZNL6 1462 aa31.12■■■□□ 2.57
LCK-209ENST00000469956 AQRO60306 1485 aaKnown RBP eCLIP31.08■■■□□ 2.57
LCK-209ENST00000469956 SOGA1O94964 1423 aa31.07■■■□□ 2.56
LCK-209ENST00000469956 OSCARQ8IYS5 282 aa31.03■■■□□ 2.56
LCK-209ENST00000469956 TDRD9Q8NDG6 1382 aaKnown RBP30.96■■■□□ 2.55
LCK-209ENST00000469956 WDR97A6NE52 1622 aa30.94■■■□□ 2.54
LCK-209ENST00000469956 CHD1O14646 1710 aa30.93■■■□□ 2.54
LCK-209ENST00000469956 BIVM-ERCC5R4GMW8 1640 aa30.84■■■□□ 2.53
LCK-209ENST00000469956 SYNJ1O43426 1573 aa30.83■■■□□ 2.53
LCK-209ENST00000469956 WRNQ14191 1432 aaPredicted RBP eCLIP30.81■■■□□ 2.52
LCK-209ENST00000469956 TOP2BQ02880 1626 aa30.8■■■□□ 2.52
LCK-209ENST00000469956 SNAPC4Q5SXM2 1469 aa30.8■■■□□ 2.52
LCK-209ENST00000469956 PBRM1Q86U86 1689 aa30.77■■■□□ 2.52
LCK-209ENST00000469956 FBLN2P98095 1184 aa30.76■■■□□ 2.51
LCK-209ENST00000469956 ABCA10Q8WWZ4 1543 aa30.76■■■□□ 2.51
LCK-209ENST00000469956 TRIM41Q8WV44 630 aa30.75■■■□□ 2.51
LCK-209ENST00000469956 GRIN2BQ13224 1484 aa30.74■■■□□ 2.51
LCK-209ENST00000469956 ABCA5Q8WWZ7 1642 aa30.73■■■□□ 2.51
LCK-209ENST00000469956 GAPVD1Q14C86 1478 aa30.71■■■□□ 2.51
LCK-209ENST00000469956 RIMBP3CA6NJZ7 1639 aa30.7■■■□□ 2.51
LCK-209ENST00000469956 RIMBP3BA6NNM3 1639 aa30.7■■■□□ 2.51
LCK-209ENST00000469956 RIMBP3Q9UFD9 1639 aa30.7■■■□□ 2.51
LCK-209ENST00000469956 MAGI1Q96QZ7 1491 aaPredicted RBP30.69■■■□□ 2.5
LCK-209ENST00000469956 ARHGEF11O15085 1522 aa30.62■■■□□ 2.49
LCK-209ENST00000469956 SYNJ2O15056 1496 aa30.58■■■□□ 2.49
LCK-209ENST00000469956 CHMP7Q8WUX9 453 aaPredicted RBP30.58■■■□□ 2.49
LCK-209ENST00000469956 CLASP1Q7Z460 1538 aa30.51■■■□□ 2.47
LCK-209ENST00000469956 ADAMTS12P58397 1594 aa30.46■■■□□ 2.47
LCK-209ENST00000469956 ERICH3Q5RHP9 1530 aa30.38■■■□□ 2.45
LCK-209ENST00000469956 GRIN2AQ12879 1464 aa30.37■■■□□ 2.45
LCK-209ENST00000469956 ARAP1Q96P48 1450 aa30.36■■■□□ 2.45
LCK-209ENST00000469956 FHAD1B1AJZ9 1412 aa30.32■■■□□ 2.44
LCK-209ENST00000469956 CYB5RLQ6IPT4 315 aa30.32■■■□□ 2.44
LCK-209ENST00000469956 CEP170Q5SW79 1584 aa30.29■■■□□ 2.44
LCK-209ENST00000469956 NUP160Q12769 1436 aa30.22■■■□□ 2.43
LCK-209ENST00000469956 KIF27Q86VH2 1401 aa30.15■■■□□ 2.42
LCK-209ENST00000469956 ERCC6L2Q5T890 1561 aa30.13■■■□□ 2.41
LCK-209ENST00000469956 IGF1RP08069 1367 aa30.09■■■□□ 2.41
LCK-209ENST00000469956 SHROOM2Q13796 1616 aa30.09■■■□□ 2.41
LCK-209ENST00000469956 CUL7Q14999 1698 aa30.07■■■□□ 2.41
LCK-209ENST00000469956 RUSC2Q8N2Y8 1516 aa30.03■■■□□ 2.4
LCK-209ENST00000469956 PRG4Q92954 1404 aaPredicted RBP29.9■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms