RNA–Protein interactions for RNA: ENST00000469855.1

IFRD2-209, Transcript of interferon related developmental regulator 2, humanhuman

TSL 2

Gene IFRD2, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFRD2-209ENST00000469855 NISCHQ9Y2I1 1504 aa31.93■■■□□ 2.7
IFRD2-209ENST00000469855 CCDC180Q9P1Z9 1646 aa28.53■■■□□ 2.16
IFRD2-209ENST00000469855 ABCC9O60706 1549 aa28.13■■■□□ 2.09
IFRD2-209ENST00000469855 RB1CC1Q8TDY2 1594 aa26.97■■□□□ 1.91
IFRD2-209ENST00000469855 NACADO15069 1562 aa26.87■■□□□ 1.89
IFRD2-209ENST00000469855 DCAF8L2P0C7V8 631 aa26.82■■□□□ 1.88
IFRD2-209ENST00000469855 MYO15BQ96JP2 1530 aa26.61■■□□□ 1.85
IFRD2-209ENST00000469855 ZCCHC6Q5VYS8 1495 aaKnown RBP26.54■■□□□ 1.84
IFRD2-209ENST00000469855 DCAF1Q9Y4B6 1507 aa26.4■■□□□ 1.82
IFRD2-209ENST00000469855 UNC13AQ9UPW8 1703 aa26.39■■□□□ 1.82
IFRD2-209ENST00000469855 PABPN1Q86U42 306 aaKnown RBP eCLIP26.24■■□□□ 1.79
IFRD2-209ENST00000469855 BICRAQ9NZM4 1560 aa26.14■■□□□ 1.78
IFRD2-209ENST00000469855 DNAJC5BQ9UF47 199 aa26.03■■□□□ 1.76
IFRD2-209ENST00000469855 SCRIBQ14160 1630 aa25.99■■□□□ 1.75
IFRD2-209ENST00000469855 SHROOM4Q9ULL8 1493 aa25.84■■□□□ 1.73
IFRD2-209ENST00000469855 EIF4G1Q04637 1599 aaKnown RBP25.48■■□□□ 1.67
IFRD2-209ENST00000469855 CC2D2AQ9P2K1 1620 aa25.45■■□□□ 1.66
IFRD2-209ENST00000469855 CECR2Q9BXF3 1484 aa25.3■■□□□ 1.64
IFRD2-209ENST00000469855 SMARCA4P51532 1647 aa24.84■■□□□ 1.57
IFRD2-209ENST00000469855 BAZ1AQ9NRL2 1556 aaPredicted RBP24.78■■□□□ 1.56
IFRD2-209ENST00000469855 NCAPD3P42695 1498 aa24.77■■□□□ 1.56
IFRD2-209ENST00000469855 ATAD2BQ9ULI0 1458 aa24.75■■□□□ 1.55
IFRD2-209ENST00000469855 SMARCA2P51531 1590 aa24.73■■□□□ 1.55
IFRD2-209ENST00000469855 HMGXB3Q12766 1538 aa24.64■■□□□ 1.53
IFRD2-209ENST00000469855 MROH2BQ7Z745 1585 aa24.59■■□□□ 1.53
IFRD2-209ENST00000469855 PEG3Q9GZU2 1588 aa24.59■■□□□ 1.53
IFRD2-209ENST00000469855 BAZ1BQ9UIG0 1483 aaKnown RBP24.55■■□□□ 1.52
IFRD2-209ENST00000469855 WIZO95785 1651 aa24.35■■□□□ 1.49
IFRD2-209ENST00000469855 ERCC6Q03468 1493 aa24.28■■□□□ 1.48
IFRD2-209ENST00000469855 NESP48681 1621 aa24.26■■□□□ 1.47
IFRD2-209ENST00000469855 RSF1Q96T23 1441 aaPredicted RBP24.22■■□□□ 1.47
IFRD2-209ENST00000469855 LAMC3Q9Y6N6 1575 aa24.19■■□□□ 1.46
IFRD2-209ENST00000469855 CUX2O14529 1486 aa24.1■■□□□ 1.45
IFRD2-209ENST00000469855 TOP2AP11388 1531 aaKnown RBP24.05■■□□□ 1.44
IFRD2-209ENST00000469855 CADPSQ9ULU8 1353 aa24.04■■□□□ 1.44
IFRD2-209ENST00000469855 PDS5BQ9NTI5 1447 aa24.03■■□□□ 1.44
IFRD2-209ENST00000469855 KIF21AQ7Z4S6 1674 aa24.01■■□□□ 1.43
IFRD2-209ENST00000469855 THOC2Q8NI27 1593 aaKnown RBP23.95■■□□□ 1.43
IFRD2-209ENST00000469855 CFTRP13569 1480 aa23.85■■□□□ 1.41
IFRD2-209ENST00000469855 MRC2Q9UBG0 1479 aa23.78■■□□□ 1.4
IFRD2-209ENST00000469855 CCDC88BA6NC98 1476 aa23.77■■□□□ 1.4
IFRD2-209ENST00000469855 FANCD2Q9BXW9 1451 aa23.77■■□□□ 1.4
IFRD2-209ENST00000469855 CEP164Q9UPV0 1460 aa23.77■■□□□ 1.4
IFRD2-209ENST00000469855 PRDM2Q13029 1718 aa23.72■■□□□ 1.39
IFRD2-209ENST00000469855 WDR62O43379 1518 aa23.7■■□□□ 1.38
IFRD2-209ENST00000469855 DNAJC5Q9H3Z4 198 aa23.66■■□□□ 1.38
IFRD2-209ENST00000469855 URB2Q14146 1524 aaKnown RBP23.54■■□□□ 1.36
IFRD2-209ENST00000469855 SUPT5HO00267 1087 aaKnown RBP23.46■■□□□ 1.35
IFRD2-209ENST00000469855 ABCC8Q09428 1581 aa23.37■■□□□ 1.33
IFRD2-209ENST00000469855 TOPBP1Q92547 1522 aa23.37■■□□□ 1.33
IFRD2-209ENST00000469855 DNMBPQ6XZF7 1577 aa23.32■■□□□ 1.32
IFRD2-209ENST00000469855 IFT140Q96RY7 1462 aa23.28■■□□□ 1.32
IFRD2-209ENST00000469855 ZNF608Q9ULD9 1512 aaPredicted RBP23.18■■□□□ 1.3
IFRD2-209ENST00000469855 POLA1P09884 1462 aaPredicted RBP23.15■■□□□ 1.3
IFRD2-209ENST00000469855 TARBP1Q13395 1621 aaKnown RBP23.14■■□□□ 1.29
IFRD2-209ENST00000469855 EIF4G3O43432 1585 aaKnown RBP23.1■■□□□ 1.29
IFRD2-209ENST00000469855 CUX1P39880 1505 aa23.09■■□□□ 1.29
IFRD2-209ENST00000469855 OSCARQ8IYS5 282 aa23.08■■□□□ 1.29
IFRD2-209ENST00000469855 FGD5Q6ZNL6 1462 aa23.06■■□□□ 1.28
IFRD2-209ENST00000469855 SOGA1O94964 1423 aa23.06■■□□□ 1.28
IFRD2-209ENST00000469855 RAD54L2Q9Y4B4 1467 aa23.05■■□□□ 1.28
IFRD2-209ENST00000469855 AQRO60306 1485 aaKnown RBP eCLIP23.04■■□□□ 1.281e-8■■■■■ 39.1
IFRD2-209ENST00000469855 WDR97A6NE52 1622 aa22.95■■□□□ 1.26
IFRD2-209ENST00000469855 TDRD9Q8NDG6 1382 aaKnown RBP22.95■■□□□ 1.26
IFRD2-209ENST00000469855 CHD1O14646 1710 aa22.89■■□□□ 1.26
IFRD2-209ENST00000469855 WRNQ14191 1432 aaPredicted RBP eCLIP22.86■■□□□ 1.25
IFRD2-209ENST00000469855 BIVM-ERCC5R4GMW8 1640 aa22.85■■□□□ 1.25
IFRD2-209ENST00000469855 TOP2BQ02880 1626 aa22.84■■□□□ 1.25
IFRD2-209ENST00000469855 FBLN2P98095 1184 aa22.84■■□□□ 1.25
IFRD2-209ENST00000469855 GRIN2BQ13224 1484 aa22.82■■□□□ 1.24
IFRD2-209ENST00000469855 ABCA10Q8WWZ4 1543 aa22.82■■□□□ 1.24
IFRD2-209ENST00000469855 SYNJ1O43426 1573 aa22.81■■□□□ 1.24
IFRD2-209ENST00000469855 SNAPC4Q5SXM2 1469 aa22.81■■□□□ 1.24
IFRD2-209ENST00000469855 GAPVD1Q14C86 1478 aa22.79■■□□□ 1.24
IFRD2-209ENST00000469855 PBRM1Q86U86 1689 aa22.79■■□□□ 1.24
IFRD2-209ENST00000469855 TRIM41Q8WV44 630 aa22.79■■□□□ 1.24
IFRD2-209ENST00000469855 MAGI1Q96QZ7 1491 aaPredicted RBP22.79■■□□□ 1.24
IFRD2-209ENST00000469855 ABCA5Q8WWZ7 1642 aa22.75■■□□□ 1.23
IFRD2-209ENST00000469855 CHMP7Q8WUX9 453 aaPredicted RBP22.74■■□□□ 1.23
IFRD2-209ENST00000469855 RIMBP3CA6NJZ7 1639 aa22.73■■□□□ 1.23
IFRD2-209ENST00000469855 RIMBP3BA6NNM3 1639 aa22.73■■□□□ 1.23
IFRD2-209ENST00000469855 RIMBP3Q9UFD9 1639 aa22.73■■□□□ 1.23
IFRD2-209ENST00000469855 SYNJ2O15056 1496 aa22.7■■□□□ 1.22
IFRD2-209ENST00000469855 ARHGEF11O15085 1522 aa22.68■■□□□ 1.22
IFRD2-209ENST00000469855 CLASP1Q7Z460 1538 aa22.6■■□□□ 1.21
IFRD2-209ENST00000469855 ERICH3Q5RHP9 1530 aa22.56■■□□□ 1.2
IFRD2-209ENST00000469855 ADAMTS12P58397 1594 aa22.55■■□□□ 1.2
IFRD2-209ENST00000469855 GRIN2AQ12879 1464 aa22.52■■□□□ 1.2
IFRD2-209ENST00000469855 FHAD1B1AJZ9 1412 aa22.51■■□□□ 1.19
IFRD2-209ENST00000469855 CYB5RLQ6IPT4 315 aa22.51■■□□□ 1.19
IFRD2-209ENST00000469855 ARAP1Q96P48 1450 aa22.47■■□□□ 1.19
IFRD2-209ENST00000469855 NUP160Q12769 1436 aa22.42■■□□□ 1.18
IFRD2-209ENST00000469855 CEP170Q5SW79 1584 aa22.42■■□□□ 1.18
IFRD2-209ENST00000469855 KIF27Q86VH2 1401 aa22.4■■□□□ 1.18
IFRD2-209ENST00000469855 IGF1RP08069 1367 aa22.34■■□□□ 1.17
IFRD2-209ENST00000469855 CUL7Q14999 1698 aa22.32■■□□□ 1.16
IFRD2-209ENST00000469855 SHROOM2Q13796 1616 aa22.3■■□□□ 1.16
IFRD2-209ENST00000469855 ERCC6L2Q5T890 1561 aa22.26■■□□□ 1.15
IFRD2-209ENST00000469855 RUSC2Q8N2Y8 1516 aa22.22■■□□□ 1.15
IFRD2-209ENST00000469855 JPH4Q96JJ6 628 aa22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms