RNA–Protein interactions for RNA: ENST00000469848.1

ITSN2-210, Transcript of intersectin 2, humanhuman

TSL 2

Gene ITSN2, Length 563 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN2-210ENST00000469848 NISCHQ9Y2I1 1504 aa31.39■■■□□ 2.61
ITSN2-210ENST00000469848 CCDC180Q9P1Z9 1646 aa27.85■■■□□ 2.05
ITSN2-210ENST00000469848 ABCC9O60706 1549 aa27.23■■□□□ 1.95
ITSN2-210ENST00000469848 DCAF8L2P0C7V8 631 aa26.2■■□□□ 1.78
ITSN2-210ENST00000469848 RB1CC1Q8TDY2 1594 aa26.2■■□□□ 1.78
ITSN2-210ENST00000469848 ZCCHC6Q5VYS8 1495 aaKnown RBP26.17■■□□□ 1.78
ITSN2-210ENST00000469848 NACADO15069 1562 aa26.17■■□□□ 1.78
ITSN2-210ENST00000469848 MYO15BQ96JP2 1530 aa26.03■■□□□ 1.76
ITSN2-210ENST00000469848 DCAF1Q9Y4B6 1507 aa25.96■■□□□ 1.75
ITSN2-210ENST00000469848 UNC13AQ9UPW8 1703 aa25.6■■□□□ 1.69
ITSN2-210ENST00000469848 SCRIBQ14160 1630 aa25.47■■□□□ 1.67
ITSN2-210ENST00000469848 PABPN1Q86U42 306 aaKnown RBP eCLIP25.46■■□□□ 1.67
ITSN2-210ENST00000469848 BICRAQ9NZM4 1560 aa25.41■■□□□ 1.66
ITSN2-210ENST00000469848 SHROOM4Q9ULL8 1493 aa25.13■■□□□ 1.61
ITSN2-210ENST00000469848 DNAJC5BQ9UF47 199 aa24.91■■□□□ 1.58
ITSN2-210ENST00000469848 EIF4G1Q04637 1599 aaKnown RBP24.74■■□□□ 1.55
ITSN2-210ENST00000469848 AEBP2Q6ZN18 517 aaPredicted RBP24.66■■□□□ 1.54
ITSN2-210ENST00000469848 CC2D2AQ9P2K1 1620 aa24.62■■□□□ 1.53
ITSN2-210ENST00000469848 CECR2Q9BXF3 1484 aa24.47■■□□□ 1.51
ITSN2-210ENST00000469848 SMARCA4P51532 1647 aa24.35■■□□□ 1.49
ITSN2-210ENST00000469848 BAZ1AQ9NRL2 1556 aaPredicted RBP24.33■■□□□ 1.48
ITSN2-210ENST00000469848 MROH2BQ7Z745 1585 aa24.21■■□□□ 1.47
ITSN2-210ENST00000469848 ATAD2BQ9ULI0 1458 aa24.2■■□□□ 1.47
ITSN2-210ENST00000469848 NCAPD3P42695 1498 aa24.15■■□□□ 1.46
ITSN2-210ENST00000469848 SMARCA2P51531 1590 aa24.15■■□□□ 1.46
ITSN2-210ENST00000469848 PEG3Q9GZU2 1588 aa24.09■■□□□ 1.45
ITSN2-210ENST00000469848 HMGXB3Q12766 1538 aa24.05■■□□□ 1.44
ITSN2-210ENST00000469848 BAZ1BQ9UIG0 1483 aaKnown RBP24■■□□□ 1.43
ITSN2-210ENST00000469848 RSF1Q96T23 1441 aaPredicted RBP23.95■■□□□ 1.42
ITSN2-210ENST00000469848 WIZO95785 1651 aa23.95■■□□□ 1.42
ITSN2-210ENST00000469848 TOP2AP11388 1531 aaKnown RBP23.69■■□□□ 1.38
ITSN2-210ENST00000469848 NESP48681 1621 aa23.59■■□□□ 1.37
ITSN2-210ENST00000469848 LAMC3Q9Y6N6 1575 aa23.51■■□□□ 1.35
ITSN2-210ENST00000469848 CADPSQ9ULU8 1353 aa23.46■■□□□ 1.35
ITSN2-210ENST00000469848 ERCC6Q03468 1493 aa23.45■■□□□ 1.34
ITSN2-210ENST00000469848 CCDC88BA6NC98 1476 aa23.41■■□□□ 1.34
ITSN2-210ENST00000469848 SUPT5HO00267 1087 aaKnown RBP23.4■■□□□ 1.34
ITSN2-210ENST00000469848 PDS5BQ9NTI5 1447 aa23.34■■□□□ 1.33
ITSN2-210ENST00000469848 CFTRP13569 1480 aa23.34■■□□□ 1.33
ITSN2-210ENST00000469848 KIF21AQ7Z4S6 1674 aa23.29■■□□□ 1.32
ITSN2-210ENST00000469848 CHIC1Q5VXU3 224 aa23.21■■□□□ 1.31
ITSN2-210ENST00000469848 FANCD2Q9BXW9 1451 aa23.21■■□□□ 1.31
ITSN2-210ENST00000469848 THOC2Q8NI27 1593 aaKnown RBP23.21■■□□□ 1.31
ITSN2-210ENST00000469848 CUX2O14529 1486 aa23.17■■□□□ 1.3
ITSN2-210ENST00000469848 CEP164Q9UPV0 1460 aa23.17■■□□□ 1.3
ITSN2-210ENST00000469848 PRDM2Q13029 1718 aa23.15■■□□□ 1.3
ITSN2-210ENST00000469848 MRC2Q9UBG0 1479 aa23.12■■□□□ 1.29
ITSN2-210ENST00000469848 WDR62O43379 1518 aa23.05■■□□□ 1.28
ITSN2-210ENST00000469848 URB2Q14146 1524 aaKnown RBP22.98■■□□□ 1.27
ITSN2-210ENST00000469848 TOPBP1Q92547 1522 aa22.84■■□□□ 1.25
ITSN2-210ENST00000469848 DNMBPQ6XZF7 1577 aa22.82■■□□□ 1.24
ITSN2-210ENST00000469848 DNAJC5Q9H3Z4 198 aa22.82■■□□□ 1.24
ITSN2-210ENST00000469848 ABCC8Q09428 1581 aa22.8■■□□□ 1.24
ITSN2-210ENST00000469848 CUX1P39880 1505 aa22.71■■□□□ 1.23
ITSN2-210ENST00000469848 IFT140Q96RY7 1462 aa22.67■■□□□ 1.22
ITSN2-210ENST00000469848 POLA1P09884 1462 aaPredicted RBP22.66■■□□□ 1.22
ITSN2-210ENST00000469848 FGD5Q6ZNL6 1462 aa22.62■■□□□ 1.21
ITSN2-210ENST00000469848 ZNF608Q9ULD9 1512 aaPredicted RBP22.59■■□□□ 1.21
ITSN2-210ENST00000469848 TARBP1Q13395 1621 aaKnown RBP22.59■■□□□ 1.21
ITSN2-210ENST00000469848 WRNQ14191 1432 aaPredicted RBP eCLIP22.58■■□□□ 1.21
ITSN2-210ENST00000469848 RAD54L2Q9Y4B4 1467 aa22.57■■□□□ 1.2
ITSN2-210ENST00000469848 SOGA1O94964 1423 aa22.55■■□□□ 1.2
ITSN2-210ENST00000469848 SYNJ1O43426 1573 aa22.55■■□□□ 1.2
ITSN2-210ENST00000469848 TOP2BQ02880 1626 aa22.52■■□□□ 1.2
ITSN2-210ENST00000469848 BIVM-ERCC5R4GMW8 1640 aa22.51■■□□□ 1.19
ITSN2-210ENST00000469848 EIF4G3O43432 1585 aaKnown RBP22.5■■□□□ 1.19
ITSN2-210ENST00000469848 AQRO60306 1485 aaKnown RBP eCLIP22.47■■□□□ 1.193e-8■□□□□ 10.5
ITSN2-210ENST00000469848 TDRD9Q8NDG6 1382 aaKnown RBP22.43■■□□□ 1.18
ITSN2-210ENST00000469848 WDR97A6NE52 1622 aa22.42■■□□□ 1.18
ITSN2-210ENST00000469848 ABCA10Q8WWZ4 1543 aa22.39■■□□□ 1.17
ITSN2-210ENST00000469848 ABCA5Q8WWZ7 1642 aa22.31■■□□□ 1.16
ITSN2-210ENST00000469848 GAPVD1Q14C86 1478 aa22.3■■□□□ 1.16
ITSN2-210ENST00000469848 GRIN2BQ13224 1484 aa22.28■■□□□ 1.16
ITSN2-210ENST00000469848 SNAPC4Q5SXM2 1469 aa22.27■■□□□ 1.16
ITSN2-210ENST00000469848 PBRM1Q86U86 1689 aa22.25■■□□□ 1.15
ITSN2-210ENST00000469848 MAGI1Q96QZ7 1491 aaPredicted RBP22.22■■□□□ 1.15
ITSN2-210ENST00000469848 OSCARQ8IYS5 282 aa22.2■■□□□ 1.14
ITSN2-210ENST00000469848 CHD1O14646 1710 aa22.19■■□□□ 1.14
ITSN2-210ENST00000469848 FBLN2P98095 1184 aa22.17■■□□□ 1.14
ITSN2-210ENST00000469848 SYNJ2O15056 1496 aa22.13■■□□□ 1.13
ITSN2-210ENST00000469848 ERICH3Q5RHP9 1530 aa22.11■■□□□ 1.13
ITSN2-210ENST00000469848 ADAMTS12P58397 1594 aa22.1■■□□□ 1.13
ITSN2-210ENST00000469848 CHMP7Q8WUX9 453 aaPredicted RBP22.1■■□□□ 1.13
ITSN2-210ENST00000469848 KIF27Q86VH2 1401 aa22.09■■□□□ 1.13
ITSN2-210ENST00000469848 TRIM41Q8WV44 630 aa22.08■■□□□ 1.13
ITSN2-210ENST00000469848 FHAD1B1AJZ9 1412 aa22.04■■□□□ 1.12
ITSN2-210ENST00000469848 GRIN2AQ12879 1464 aa22.01■■□□□ 1.11
ITSN2-210ENST00000469848 IGF1RP08069 1367 aa21.99■■□□□ 1.11
ITSN2-210ENST00000469848 CLASP1Q7Z460 1538 aa21.96■■□□□ 1.11
ITSN2-210ENST00000469848 RUSC2Q8N2Y8 1516 aa21.94■■□□□ 1.1
ITSN2-210ENST00000469848 CUL7Q14999 1698 aa21.93■■□□□ 1.1
ITSN2-210ENST00000469848 CEP170Q5SW79 1584 aa21.91■■□□□ 1.1
ITSN2-210ENST00000469848 NUP160Q12769 1436 aa21.9■■□□□ 1.1
ITSN2-210ENST00000469848 ARHGEF11O15085 1522 aa21.88■■□□□ 1.09
ITSN2-210ENST00000469848 RIMBP3CA6NJZ7 1639 aa21.87■■□□□ 1.09
ITSN2-210ENST00000469848 RIMBP3BA6NNM3 1639 aa21.87■■□□□ 1.09
ITSN2-210ENST00000469848 RIMBP3Q9UFD9 1639 aa21.87■■□□□ 1.09
ITSN2-210ENST00000469848 CARMIL1Q5VZK9 1371 aa21.87■■□□□ 1.09
ITSN2-210ENST00000469848 RAPGEF2Q9Y4G8 1499 aa21.75■■□□□ 1.07
ITSN2-210ENST00000469848 SHROOM2Q13796 1616 aa21.72■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms