RNA–Protein interactions for RNA: ENST00000469843.1

GIGYF2-228, Transcript of GRB10 interacting GYF protein 2, humanhuman

TSL 4

Gene GIGYF2, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GIGYF2-228ENST00000469843 NISCHQ9Y2I1 1504 aa26.25■■□□□ 1.79
GIGYF2-228ENST00000469843 CCDC180Q9P1Z9 1646 aa23.36■■□□□ 1.33
GIGYF2-228ENST00000469843 ABCC9O60706 1549 aa22.71■■□□□ 1.23
GIGYF2-228ENST00000469843 RB1CC1Q8TDY2 1594 aa21.93■■□□□ 1.1
GIGYF2-228ENST00000469843 NACADO15069 1562 aa21.91■■□□□ 1.1
GIGYF2-228ENST00000469843 ZCCHC6Q5VYS8 1495 aaKnown RBP21.91■■□□□ 1.1
GIGYF2-228ENST00000469843 DCAF8L2P0C7V8 631 aa21.87■■□□□ 1.09
GIGYF2-228ENST00000469843 MYO15BQ96JP2 1530 aa21.8■■□□□ 1.08
GIGYF2-228ENST00000469843 DCAF1Q9Y4B6 1507 aa21.75■■□□□ 1.07
GIGYF2-228ENST00000469843 UNC13AQ9UPW8 1703 aa21.4■■□□□ 1.02
GIGYF2-228ENST00000469843 SCRIBQ14160 1630 aa21.31■■□□□ 1
GIGYF2-228ENST00000469843 BICRAQ9NZM4 1560 aa21.2■□□□□ 0.98
GIGYF2-228ENST00000469843 PABPN1Q86U42 306 aaKnown RBP eCLIP21.19■□□□□ 0.98
GIGYF2-228ENST00000469843 SHROOM4Q9ULL8 1493 aa21.07■□□□□ 0.96
GIGYF2-228ENST00000469843 EIF4G1Q04637 1599 aaKnown RBP20.68■□□□□ 0.9
GIGYF2-228ENST00000469843 DNAJC5BQ9UF47 199 aa20.63■□□□□ 0.89
GIGYF2-228ENST00000469843 CC2D2AQ9P2K1 1620 aa20.56■□□□□ 0.88
GIGYF2-228ENST00000469843 CECR2Q9BXF3 1484 aa20.4■□□□□ 0.86
GIGYF2-228ENST00000469843 SMARCA4P51532 1647 aa20.38■□□□□ 0.85
GIGYF2-228ENST00000469843 BAZ1AQ9NRL2 1556 aaPredicted RBP20.38■□□□□ 0.85
GIGYF2-228ENST00000469843 SMARCA2P51531 1590 aa20.24■□□□□ 0.83
GIGYF2-228ENST00000469843 MROH2BQ7Z745 1585 aa20.22■□□□□ 0.83
GIGYF2-228ENST00000469843 ATAD2BQ9ULI0 1458 aa20.21■□□□□ 0.83
GIGYF2-228ENST00000469843 NCAPD3P42695 1498 aa20.18■□□□□ 0.82
GIGYF2-228ENST00000469843 PEG3Q9GZU2 1588 aa20.17■□□□□ 0.82
GIGYF2-228ENST00000469843 HMGXB3Q12766 1538 aa20.14■□□□□ 0.81
GIGYF2-228ENST00000469843 BAZ1BQ9UIG0 1483 aaKnown RBP20.09■□□□□ 0.81
GIGYF2-228ENST00000469843 WIZO95785 1651 aa20.02■□□□□ 0.8
GIGYF2-228ENST00000469843 RSF1Q96T23 1441 aaPredicted RBP20.02■□□□□ 0.79
GIGYF2-228ENST00000469843 TOP2AP11388 1531 aaKnown RBP19.86■□□□□ 0.77
GIGYF2-228ENST00000469843 LAMC3Q9Y6N6 1575 aa19.68■□□□□ 0.74
GIGYF2-228ENST00000469843 NESP48681 1621 aa19.65■□□□□ 0.74
GIGYF2-228ENST00000469843 ERCC6Q03468 1493 aa19.62■□□□□ 0.73
GIGYF2-228ENST00000469843 CADPSQ9ULU8 1353 aa19.59■□□□□ 0.73
GIGYF2-228ENST00000469843 SUPT5HO00267 1087 aaKnown RBP19.58■□□□□ 0.72
GIGYF2-228ENST00000469843 CCDC88BA6NC98 1476 aa19.56■□□□□ 0.72
GIGYF2-228ENST00000469843 PDS5BQ9NTI5 1447 aa19.53■□□□□ 0.72
GIGYF2-228ENST00000469843 CFTRP13569 1480 aa19.51■□□□□ 0.71
GIGYF2-228ENST00000469843 KIF21AQ7Z4S6 1674 aa19.48■□□□□ 0.71
GIGYF2-228ENST00000469843 PRDM2Q13029 1718 aa19.44■□□□□ 0.7
GIGYF2-228ENST00000469843 FANCD2Q9BXW9 1451 aa19.4■□□□□ 0.7
GIGYF2-228ENST00000469843 CEP164Q9UPV0 1460 aa19.4■□□□□ 0.7
GIGYF2-228ENST00000469843 THOC2Q8NI27 1593 aaKnown RBP19.39■□□□□ 0.69
GIGYF2-228ENST00000469843 CUX2O14529 1486 aa19.36■□□□□ 0.69
GIGYF2-228ENST00000469843 MRC2Q9UBG0 1479 aa19.34■□□□□ 0.69
GIGYF2-228ENST00000469843 WDR62O43379 1518 aa19.26■□□□□ 0.67
GIGYF2-228ENST00000469843 URB2Q14146 1524 aaKnown RBP19.17■□□□□ 0.66
GIGYF2-228ENST00000469843 ABCC8Q09428 1581 aa19.12■□□□□ 0.65
GIGYF2-228ENST00000469843 DNMBPQ6XZF7 1577 aa19.1■□□□□ 0.65
GIGYF2-228ENST00000469843 TOPBP1Q92547 1522 aa19.1■□□□□ 0.65
GIGYF2-228ENST00000469843 CUX1P39880 1505 aa18.98■□□□□ 0.63
GIGYF2-228ENST00000469843 IFT140Q96RY7 1462 aa18.97■□□□□ 0.63
GIGYF2-228ENST00000469843 POLA1P09884 1462 aaPredicted RBP18.94■□□□□ 0.62
GIGYF2-228ENST00000469843 FGD5Q6ZNL6 1462 aa18.91■□□□□ 0.62
GIGYF2-228ENST00000469843 WRNQ14191 1432 aaPredicted RBP eCLIP18.91■□□□□ 0.62
GIGYF2-228ENST00000469843 BIVM-ERCC5R4GMW8 1640 aa18.88■□□□□ 0.61
GIGYF2-228ENST00000469843 TARBP1Q13395 1621 aaKnown RBP18.87■□□□□ 0.61
GIGYF2-228ENST00000469843 TOP2BQ02880 1626 aa18.86■□□□□ 0.61
GIGYF2-228ENST00000469843 SYNJ1O43426 1573 aa18.85■□□□□ 0.61
GIGYF2-228ENST00000469843 SOGA1O94964 1423 aa18.84■□□□□ 0.61
GIGYF2-228ENST00000469843 ZNF608Q9ULD9 1512 aaPredicted RBP18.83■□□□□ 0.6
GIGYF2-228ENST00000469843 RAD54L2Q9Y4B4 1467 aa18.83■□□□□ 0.6
GIGYF2-228ENST00000469843 EIF4G3O43432 1585 aaKnown RBP18.82■□□□□ 0.6
GIGYF2-228ENST00000469843 WDR97A6NE52 1622 aa18.8■□□□□ 0.6
GIGYF2-228ENST00000469843 ABCA10Q8WWZ4 1543 aa18.74■□□□□ 0.59
GIGYF2-228ENST00000469843 AQRO60306 1485 aaKnown RBP eCLIP18.73■□□□□ 0.594e-18■■□□□ 11.9
GIGYF2-228ENST00000469843 TDRD9Q8NDG6 1382 aaKnown RBP18.71■□□□□ 0.59
GIGYF2-228ENST00000469843 ABCA5Q8WWZ7 1642 aa18.67■□□□□ 0.58
GIGYF2-228ENST00000469843 GAPVD1Q14C86 1478 aa18.65■□□□□ 0.58
GIGYF2-228ENST00000469843 PBRM1Q86U86 1689 aa18.65■□□□□ 0.58
GIGYF2-228ENST00000469843 GRIN2BQ13224 1484 aa18.65■□□□□ 0.58
GIGYF2-228ENST00000469843 SNAPC4Q5SXM2 1469 aa18.61■□□□□ 0.57
GIGYF2-228ENST00000469843 MAGI1Q96QZ7 1491 aaPredicted RBP18.59■□□□□ 0.57
GIGYF2-228ENST00000469843 DNAJC5Q9H3Z4 198 aa18.56■□□□□ 0.56
GIGYF2-228ENST00000469843 CHD1O14646 1710 aa18.56■□□□□ 0.56
GIGYF2-228ENST00000469843 ERICH3Q5RHP9 1530 aa18.53■□□□□ 0.56
GIGYF2-228ENST00000469843 SYNJ2O15056 1496 aa18.52■□□□□ 0.55
GIGYF2-228ENST00000469843 KIF27Q86VH2 1401 aa18.51■□□□□ 0.55
GIGYF2-228ENST00000469843 OSCARQ8IYS5 282 aa18.51■□□□□ 0.55
GIGYF2-228ENST00000469843 FBLN2P98095 1184 aa18.5■□□□□ 0.55
GIGYF2-228ENST00000469843 TRIM41Q8WV44 630 aa18.5■□□□□ 0.55
GIGYF2-228ENST00000469843 ADAMTS12P58397 1594 aa18.5■□□□□ 0.55
GIGYF2-228ENST00000469843 CHMP7Q8WUX9 453 aaPredicted RBP18.47■□□□□ 0.55
GIGYF2-228ENST00000469843 FHAD1B1AJZ9 1412 aa18.45■□□□□ 0.54
GIGYF2-228ENST00000469843 CUL7Q14999 1698 aa18.41■□□□□ 0.54
GIGYF2-228ENST00000469843 GRIN2AQ12879 1464 aa18.4■□□□□ 0.54
GIGYF2-228ENST00000469843 IGF1RP08069 1367 aa18.36■□□□□ 0.53
GIGYF2-228ENST00000469843 CLASP1Q7Z460 1538 aa18.34■□□□□ 0.53
GIGYF2-228ENST00000469843 NUP160Q12769 1436 aa18.31■□□□□ 0.52
GIGYF2-228ENST00000469843 CEP170Q5SW79 1584 aa18.3■□□□□ 0.52
GIGYF2-228ENST00000469843 RUSC2Q8N2Y8 1516 aa18.3■□□□□ 0.52
GIGYF2-228ENST00000469843 CARMIL1Q5VZK9 1371 aa18.3■□□□□ 0.52
GIGYF2-228ENST00000469843 CHIC1Q5VXU3 224 aa18.29■□□□□ 0.52
GIGYF2-228ENST00000469843 ARHGEF11O15085 1522 aa18.26■□□□□ 0.51
GIGYF2-228ENST00000469843 RIMBP3CA6NJZ7 1639 aa18.25■□□□□ 0.51
GIGYF2-228ENST00000469843 RIMBP3BA6NNM3 1639 aa18.25■□□□□ 0.51
GIGYF2-228ENST00000469843 RIMBP3Q9UFD9 1639 aa18.25■□□□□ 0.51
GIGYF2-228ENST00000469843 EEA1Q15075 1411 aa18.24■□□□□ 0.51
GIGYF2-228ENST00000469843 RAPGEF2Q9Y4G8 1499 aa18.22■□□□□ 0.51
GIGYF2-228ENST00000469843 SHROOM2Q13796 1616 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 6.7 ms