RNA–Protein interactions for RNA: ENST00000469732.1

COL1A2-205, Transcript of collagen type I alpha 2 chain, humanhuman

TSL 2

Gene COL1A2, Length 656 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2-205ENST00000469732 NISCHQ9Y2I1 1504 aa32.04■■■□□ 2.72
COL1A2-205ENST00000469732 CCDC180Q9P1Z9 1646 aa28.6■■■□□ 2.17
COL1A2-205ENST00000469732 ABCC9O60706 1549 aa28■■■□□ 2.07
COL1A2-205ENST00000469732 RB1CC1Q8TDY2 1594 aa26.91■■□□□ 1.9
COL1A2-205ENST00000469732 NACADO15069 1562 aa26.87■■□□□ 1.89
COL1A2-205ENST00000469732 MYO15BQ96JP2 1530 aa26.71■■□□□ 1.87
COL1A2-205ENST00000469732 ZCCHC6Q5VYS8 1495 aaKnown RBP26.67■■□□□ 1.86
COL1A2-205ENST00000469732 DCAF8L2P0C7V8 631 aa26.62■■□□□ 1.85
COL1A2-205ENST00000469732 DCAF1Q9Y4B6 1507 aa26.55■■□□□ 1.84
COL1A2-205ENST00000469732 UNC13AQ9UPW8 1703 aa26.48■■□□□ 1.83
COL1A2-205ENST00000469732 BICRAQ9NZM4 1560 aa26.2■■□□□ 1.79
COL1A2-205ENST00000469732 PABPN1Q86U42 306 aaKnown RBP eCLIP26.11■■□□□ 1.77
COL1A2-205ENST00000469732 SCRIBQ14160 1630 aa25.99■■□□□ 1.75
COL1A2-205ENST00000469732 DNAJC5BQ9UF47 199 aa25.91■■□□□ 1.74
COL1A2-205ENST00000469732 SHROOM4Q9ULL8 1493 aa25.85■■□□□ 1.73
COL1A2-205ENST00000469732 EIF4G1Q04637 1599 aaKnown RBP25.46■■□□□ 1.67
COL1A2-205ENST00000469732 CC2D2AQ9P2K1 1620 aa25.4■■□□□ 1.66
COL1A2-205ENST00000469732 CECR2Q9BXF3 1484 aa25.18■■□□□ 1.62
COL1A2-205ENST00000469732 SMARCA4P51532 1647 aa24.91■■□□□ 1.58
COL1A2-205ENST00000469732 BAZ1AQ9NRL2 1556 aaPredicted RBP24.82■■□□□ 1.56
COL1A2-205ENST00000469732 NCAPD3P42695 1498 aa24.81■■□□□ 1.56
COL1A2-205ENST00000469732 ATAD2BQ9ULI0 1458 aa24.77■■□□□ 1.56
COL1A2-205ENST00000469732 SMARCA2P51531 1590 aa24.72■■□□□ 1.55
COL1A2-205ENST00000469732 PEG3Q9GZU2 1588 aa24.71■■□□□ 1.55
COL1A2-205ENST00000469732 MROH2BQ7Z745 1585 aa24.69■■□□□ 1.54
COL1A2-205ENST00000469732 HMGXB3Q12766 1538 aa24.67■■□□□ 1.54
COL1A2-205ENST00000469732 BAZ1BQ9UIG0 1483 aaKnown RBP24.52■■□□□ 1.52
COL1A2-205ENST00000469732 WIZO95785 1651 aa24.45■■□□□ 1.5
COL1A2-205ENST00000469732 RSF1Q96T23 1441 aaPredicted RBP24.34■■□□□ 1.49
COL1A2-205ENST00000469732 NESP48681 1621 aa24.24■■□□□ 1.47
COL1A2-205ENST00000469732 LAMC3Q9Y6N6 1575 aa24.16■■□□□ 1.46
COL1A2-205ENST00000469732 TOP2AP11388 1531 aaKnown RBP24.14■■□□□ 1.45
COL1A2-205ENST00000469732 ERCC6Q03468 1493 aa24.08■■□□□ 1.45
COL1A2-205ENST00000469732 CADPSQ9ULU8 1353 aa24.03■■□□□ 1.44
COL1A2-205ENST00000469732 KIF21AQ7Z4S6 1674 aa24.01■■□□□ 1.43
COL1A2-205ENST00000469732 CUX2O14529 1486 aa23.97■■□□□ 1.43
COL1A2-205ENST00000469732 THOC2Q8NI27 1593 aaKnown RBP23.95■■□□□ 1.43
COL1A2-205ENST00000469732 PDS5BQ9NTI5 1447 aa23.93■■□□□ 1.42
COL1A2-205ENST00000469732 CFTRP13569 1480 aa23.89■■□□□ 1.42
COL1A2-205ENST00000469732 CCDC88BA6NC98 1476 aa23.85■■□□□ 1.41
COL1A2-205ENST00000469732 PRDM2Q13029 1718 aa23.81■■□□□ 1.4
COL1A2-205ENST00000469732 FANCD2Q9BXW9 1451 aa23.75■■□□□ 1.39
COL1A2-205ENST00000469732 MRC2Q9UBG0 1479 aa23.73■■□□□ 1.39
COL1A2-205ENST00000469732 WDR62O43379 1518 aa23.71■■□□□ 1.39
COL1A2-205ENST00000469732 CEP164Q9UPV0 1460 aa23.71■■□□□ 1.39
COL1A2-205ENST00000469732 URB2Q14146 1524 aaKnown RBP23.57■■□□□ 1.36
COL1A2-205ENST00000469732 SUPT5HO00267 1087 aaKnown RBP23.47■■□□□ 1.35
COL1A2-205ENST00000469732 DNAJC5Q9H3Z4 198 aa23.4■■□□□ 1.34
COL1A2-205ENST00000469732 TOPBP1Q92547 1522 aa23.38■■□□□ 1.33
COL1A2-205ENST00000469732 DNMBPQ6XZF7 1577 aa23.35■■□□□ 1.33
COL1A2-205ENST00000469732 ABCC8Q09428 1581 aa23.34■■□□□ 1.33
COL1A2-205ENST00000469732 IFT140Q96RY7 1462 aa23.24■■□□□ 1.31
COL1A2-205ENST00000469732 TARBP1Q13395 1621 aaKnown RBP23.19■■□□□ 1.3
COL1A2-205ENST00000469732 ZNF608Q9ULD9 1512 aaPredicted RBP23.18■■□□□ 1.3
COL1A2-205ENST00000469732 POLA1P09884 1462 aaPredicted RBP23.17■■□□□ 1.3
COL1A2-205ENST00000469732 CUX1P39880 1505 aa23.17■■□□□ 1.3
COL1A2-205ENST00000469732 EIF4G3O43432 1585 aaKnown RBP23.1■■□□□ 1.29
COL1A2-205ENST00000469732 FGD5Q6ZNL6 1462 aa23.08■■□□□ 1.29
COL1A2-205ENST00000469732 RAD54L2Q9Y4B4 1467 aa23.06■■□□□ 1.28
COL1A2-205ENST00000469732 SOGA1O94964 1423 aa23.02■■□□□ 1.28
COL1A2-205ENST00000469732 WDR97A6NE52 1622 aa23.01■■□□□ 1.27
COL1A2-205ENST00000469732 AQRO60306 1485 aaKnown RBP eCLIP23■■□□□ 1.27
COL1A2-205ENST00000469732 BIVM-ERCC5R4GMW8 1640 aa22.97■■□□□ 1.27
COL1A2-205ENST00000469732 TOP2BQ02880 1626 aa22.95■■□□□ 1.26
COL1A2-205ENST00000469732 SYNJ1O43426 1573 aa22.93■■□□□ 1.26
COL1A2-205ENST00000469732 TDRD9Q8NDG6 1382 aaKnown RBP22.91■■□□□ 1.26
COL1A2-205ENST00000469732 WRNQ14191 1432 aaPredicted RBP eCLIP22.91■■□□□ 1.26
COL1A2-205ENST00000469732 OSCARQ8IYS5 282 aa22.89■■□□□ 1.25
COL1A2-205ENST00000469732 CHD1O14646 1710 aa22.88■■□□□ 1.25
COL1A2-205ENST00000469732 ABCA10Q8WWZ4 1543 aa22.87■■□□□ 1.25
COL1A2-205ENST00000469732 ABCA5Q8WWZ7 1642 aa22.83■■□□□ 1.25
COL1A2-205ENST00000469732 PBRM1Q86U86 1689 aa22.82■■□□□ 1.24
COL1A2-205ENST00000469732 GRIN2BQ13224 1484 aa22.78■■□□□ 1.24
COL1A2-205ENST00000469732 GAPVD1Q14C86 1478 aa22.78■■□□□ 1.24
COL1A2-205ENST00000469732 SNAPC4Q5SXM2 1469 aa22.78■■□□□ 1.24
COL1A2-205ENST00000469732 MAGI1Q96QZ7 1491 aaPredicted RBP22.76■■□□□ 1.23
COL1A2-205ENST00000469732 SYNJ2O15056 1496 aa22.67■■□□□ 1.22
COL1A2-205ENST00000469732 RIMBP3CA6NJZ7 1639 aa22.64■■□□□ 1.21
COL1A2-205ENST00000469732 RIMBP3BA6NNM3 1639 aa22.64■■□□□ 1.21
COL1A2-205ENST00000469732 RIMBP3Q9UFD9 1639 aa22.64■■□□□ 1.21
COL1A2-205ENST00000469732 FBLN2P98095 1184 aa22.62■■□□□ 1.21
COL1A2-205ENST00000469732 CLASP1Q7Z460 1538 aa22.61■■□□□ 1.21
COL1A2-205ENST00000469732 ADAMTS12P58397 1594 aa22.6■■□□□ 1.21
COL1A2-205ENST00000469732 ARHGEF11O15085 1522 aa22.59■■□□□ 1.21
COL1A2-205ENST00000469732 ERICH3Q5RHP9 1530 aa22.59■■□□□ 1.21
COL1A2-205ENST00000469732 CHMP7Q8WUX9 453 aaPredicted RBP22.58■■□□□ 1.21
COL1A2-205ENST00000469732 GRIN2AQ12879 1464 aa22.51■■□□□ 1.19
COL1A2-205ENST00000469732 FHAD1B1AJZ9 1412 aa22.5■■□□□ 1.19
COL1A2-205ENST00000469732 CEP170Q5SW79 1584 aa22.46■■□□□ 1.19
COL1A2-205ENST00000469732 NUP160Q12769 1436 aa22.45■■□□□ 1.18
COL1A2-205ENST00000469732 TRIM41Q8WV44 630 aa22.44■■□□□ 1.18
COL1A2-205ENST00000469732 KIF27Q86VH2 1401 aa22.42■■□□□ 1.18
COL1A2-205ENST00000469732 ARAP1Q96P48 1450 aa22.41■■□□□ 1.18
COL1A2-205ENST00000469732 IGF1RP08069 1367 aa22.39■■□□□ 1.18
COL1A2-205ENST00000469732 CUL7Q14999 1698 aa22.36■■□□□ 1.17
COL1A2-205ENST00000469732 SHROOM2Q13796 1616 aa22.35■■□□□ 1.17
COL1A2-205ENST00000469732 CYB5RLQ6IPT4 315 aa22.29■■□□□ 1.16
COL1A2-205ENST00000469732 ERCC6L2Q5T890 1561 aa22.29■■□□□ 1.16
COL1A2-205ENST00000469732 RUSC2Q8N2Y8 1516 aa22.27■■□□□ 1.16
COL1A2-205ENST00000469732 CARMIL1Q5VZK9 1371 aa22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms